| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ptsG [H]
Identifier: 187933951
GI number: 187933951
Start: 3612496
End: 3614148
Strand: Reverse
Name: ptsG [H]
Synonym: CLL_A3423
Alternate gene names: 187933951
Gene position: 3614148-3612496 (Counterclockwise)
Preceding gene: 187932982
Following gene: 187934757
Centisome position: 95.1
GC content: 33.27
Gene sequence:
>1653_bases ATGCTTCAATATTTACAAAGAATAGGTAAAGCTATAATGCTACCAATCGCAGCTTTACCAATCGCAGGTATATTATTAGG AGTTGGTGGAGCTTTACTTGGAATTGCAGGATTAAATAATCCACCATCAGTTTATGAACCACTTATAGCATTTGTTAGTA TTCCAGCAGTTACTGCTATATTAACAGTAATGAAAAATATAGGTGATATTATTTTTGGAAACTTACCAATACTATTTGCA GTAGGTGTTGCAGTAGGTCTTGCTAAAAAAGACAAAGGTACAGCAGCATTAGCATCAGTATTTGGATTTATCGTAATGAA TCAAGTTATTTCAACATTACTAGCTTTAGGAGTTACTCAATTAGGGGTTCTTACTCCAGACAGTTTTGGTGAATATGGTA CATATATTACAACTAATTTAGGTATATTCACATTAAATATGTCAGTATTTGGTGGTATTATTACAGGTATTATTACAGCA ATATTACATGATAGATTCCATGAAATCCAATTACCACAAATATTAGGATTTTTCTCAGGATCAAGATTTGTTCCTATAAT AACAGCAGTTACTATGGCAATTGTAGGAGCTATATTAGCATTTTTATGGCCAGTAGTTCAAGATGGTATTGGAGTTATAG CTAACTTAGTTAGAAATGCAGGATTTATAGGAAGCTTTTTCTATGGAGTCATTGAAAGAGCATTAATTCCATTTGGATTA CATCATGTATTCTATACTCCATTCTGGTTTGGATCATTTGTTGATGGTCAAATATTAGTTAATGGAACTTGGCAAACAGT AGCAGGTGCAAACACTGCATACTTTGCTCAATTATCAAGCATGACTGATTTAGTGGGTGCATCAGCAGATACTATGTCAA CAATAGTTAGTGGAACTACAAGATTCATGGCAGGTAAATTCCCATTCATGATGTTTGGATTACCAGCAGCAGCTTTTGCT ATGTACAGAGCAGCAGCTCCAAGCAAGAGAAAAACAGTTGGATCATTATTATTAGCAGCAGCGATTACTTCATTATTAAC AGGTATTACTGAACCGTTAGAATTTACATTCATATTCGTTGCTCCAGTATTATATGGAGTACACTGTATATTAGCAGGTT TATCATTCATGTTAATGGATATATTCAATGTATTCATAGGAATGACATTCTCAGGTGGATTAATTGACTTTAGTTTATTT GGATTACTTCCAGCAGGAGCAGGAGTTCCAACCAAATGGTTTATGGTACTATTAATAGGAGTAGTTTATGCAGTAGTTTA TTATTTCTTATTCTACTTCATGATTACCAAGCTTAATTTAAAAACTCCTGGTAGAGATGAAAATGAAGAAGAAACTAAAT TATACACTAAAGCTGACTACCAAGGTAAAAAGGGAAACGCTAAAAGTGAAATAGTTGAAAAAGCACCAGCTGTATTATCA GCATTAGGTGGAGAAGAAAATATCGTAAGTGTTGATGCTTGTATAACAAGACTTAGAGTTGAAGTTAAGGACAAAGCTAA AGTTGATAAAGATGAATTAAAAACTTTAGGTGCAGCAGGTGTTATGGAAGTTGGTAATGGAATTCAAGCTATATTTGGAG CTAAAGCCGATGGATATAAAAATGCTATCAATGATATATTAGGTATTAGTTAA
Upstream 100 bases:
>100_bases AGTCTTTTTTATTTGCATAATTTTTGGCTGGCCGGCTAAAAATAGCAACATATACTTACATAATATTTTATTTTATTTAA TAACTTTAGGAGGAATTATT
Downstream 100 bases:
>100_bases TAATTAGTTTATACAATTAGTTTATAAAAATTTTGCCCTAGCAGATAAATATTGAGTTATCTACTAGGGCATTTAAATTT TGTGAATATTTTTTTAAAAT
Product: PTS system, glucose-like IIB component
Products: NA
Alternate protein names: EII-Glc/EIII-Glc; EIICBA-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component; Glucose-specific phosphotransferase enzyme IIA component; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MLQYLQRIGKAIMLPIAALPIAGILLGVGGALLGIAGLNNPPSVYEPLIAFVSIPAVTAILTVMKNIGDIIFGNLPILFA VGVAVGLAKKDKGTAALASVFGFIVMNQVISTLLALGVTQLGVLTPDSFGEYGTYITTNLGIFTLNMSVFGGIITGIITA ILHDRFHEIQLPQILGFFSGSRFVPIITAVTMAIVGAILAFLWPVVQDGIGVIANLVRNAGFIGSFFYGVIERALIPFGL HHVFYTPFWFGSFVDGQILVNGTWQTVAGANTAYFAQLSSMTDLVGASADTMSTIVSGTTRFMAGKFPFMMFGLPAAAFA MYRAAAPSKRKTVGSLLLAAAITSLLTGITEPLEFTFIFVAPVLYGVHCILAGLSFMLMDIFNVFIGMTFSGGLIDFSLF GLLPAGAGVPTKWFMVLLIGVVYAVVYYFLFYFMITKLNLKTPGRDENEEETKLYTKADYQGKKGNAKSEIVEKAPAVLS ALGGEENIVSVDACITRLRVEVKDKAKVDKDELKTLGAAGVMEVGNGIQAIFGAKADGYKNAINDILGIS
Sequences:
>Translated_550_residues MLQYLQRIGKAIMLPIAALPIAGILLGVGGALLGIAGLNNPPSVYEPLIAFVSIPAVTAILTVMKNIGDIIFGNLPILFA VGVAVGLAKKDKGTAALASVFGFIVMNQVISTLLALGVTQLGVLTPDSFGEYGTYITTNLGIFTLNMSVFGGIITGIITA ILHDRFHEIQLPQILGFFSGSRFVPIITAVTMAIVGAILAFLWPVVQDGIGVIANLVRNAGFIGSFFYGVIERALIPFGL HHVFYTPFWFGSFVDGQILVNGTWQTVAGANTAYFAQLSSMTDLVGASADTMSTIVSGTTRFMAGKFPFMMFGLPAAAFA MYRAAAPSKRKTVGSLLLAAAITSLLTGITEPLEFTFIFVAPVLYGVHCILAGLSFMLMDIFNVFIGMTFSGGLIDFSLF GLLPAGAGVPTKWFMVLLIGVVYAVVYYFLFYFMITKLNLKTPGRDENEEETKLYTKADYQGKKGNAKSEIVEKAPAVLS ALGGEENIVSVDACITRLRVEVKDKAKVDKDELKTLGAAGVMEVGNGIQAIFGAKADGYKNAINDILGIS >Mature_550_residues MLQYLQRIGKAIMLPIAALPIAGILLGVGGALLGIAGLNNPPSVYEPLIAFVSIPAVTAILTVMKNIGDIIFGNLPILFA VGVAVGLAKKDKGTAALASVFGFIVMNQVISTLLALGVTQLGVLTPDSFGEYGTYITTNLGIFTLNMSVFGGIITGIITA ILHDRFHEIQLPQILGFFSGSRFVPIITAVTMAIVGAILAFLWPVVQDGIGVIANLVRNAGFIGSFFYGVIERALIPFGL HHVFYTPFWFGSFVDGQILVNGTWQTVAGANTAYFAQLSSMTDLVGASADTMSTIVSGTTRFMAGKFPFMMFGLPAAAFA MYRAAAPSKRKTVGSLLLAAAITSLLTGITEPLEFTFIFVAPVLYGVHCILAGLSFMLMDIFNVFIGMTFSGGLIDFSLF GLLPAGAGVPTKWFMVLLIGVVYAVVYYFLFYFMITKLNLKTPGRDENEEETKLYTKADYQGKKGNAKSEIVEKAPAVLS ALGGEENIVSVDACITRLRVEVKDKAKVDKDELKTLGAAGVMEVGNGIQAIFGAKADGYKNAINDILGIS
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787908, Length=552, Percent_Identity=39.1304347826087, Blast_Score=359, Evalue=1e-100, Organism=Escherichia coli, GI1787343, Length=546, Percent_Identity=38.8278388278388, Blast_Score=344, Evalue=7e-96, Organism=Escherichia coli, GI1786894, Length=548, Percent_Identity=35.5839416058394, Blast_Score=274, Evalue=1e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 58488; Mature: 58488
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQYLQRIGKAIMLPIAALPIAGILLGVGGALLGIAGLNNPPSVYEPLIAFVSIPAVTAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LTVMKNIGDIIFGNLPILFAVGVAVGLAKKDKGTAALASVFGFIVMNQVISTLLALGVTQ HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVLTPDSFGEYGTYITTNLGIFTLNMSVFGGIITGIITAILHDRFHEIQLPQILGFFSG HCCCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC SRFVPIITAVTMAIVGAILAFLWPVVQDGIGVIANLVRNAGFIGSFFYGVIERALIPFGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH HHVFYTPFWFGSFVDGQILVNGTWQTVAGANTAYFAQLSSMTDLVGASADTMSTIVSGTT HHHHHHHHHHCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RFMAGKFPFMMFGLPAAAFAMYRAAAPSKRKTVGSLLLAAAITSLLTGITEPLEFTFIFV HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH APVLYGVHCILAGLSFMLMDIFNVFIGMTFSGGLIDFSLFGLLPAGAGVPTKWFMVLLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH VVYAVVYYFLFYFMITKLNLKTPGRDENEEETKLYTKADYQGKKGNAKSEIVEKAPAVLS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHH ALGGEENIVSVDACITRLRVEVKDKAKVDKDELKTLGAAGVMEVGNGIQAIFGAKADGYK HCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCHHHHHCCCCCCHH NAINDILGIS HHHHHHHCCC >Mature Secondary Structure MLQYLQRIGKAIMLPIAALPIAGILLGVGGALLGIAGLNNPPSVYEPLIAFVSIPAVTAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LTVMKNIGDIIFGNLPILFAVGVAVGLAKKDKGTAALASVFGFIVMNQVISTLLALGVTQ HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVLTPDSFGEYGTYITTNLGIFTLNMSVFGGIITGIITAILHDRFHEIQLPQILGFFSG HCCCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC SRFVPIITAVTMAIVGAILAFLWPVVQDGIGVIANLVRNAGFIGSFFYGVIERALIPFGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH HHVFYTPFWFGSFVDGQILVNGTWQTVAGANTAYFAQLSSMTDLVGASADTMSTIVSGTT HHHHHHHHHHCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RFMAGKFPFMMFGLPAAAFAMYRAAAPSKRKTVGSLLLAAAITSLLTGITEPLEFTFIFV HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH APVLYGVHCILAGLSFMLMDIFNVFIGMTFSGGLIDFSLFGLLPAGAGVPTKWFMVLLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH VVYAVVYYFLFYFMITKLNLKTPGRDENEEETKLYTKADYQGKKGNAKSEIVEKAPAVLS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHH ALGGEENIVSVDACITRLRVEVKDKAKVDKDELKTLGAAGVMEVGNGIQAIFGAKADGYK HCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCHHHHHCCCCCCHH NAINDILGIS HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1508157; 9384377; 2497294; 2120236; 1911744; 1906345; 9593197 [H]