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The map label for this gene is mcpC [H]

Identifier: 187933860

GI number: 187933860

Start: 3074711

End: 3076390

Strand: Reverse

Name: mcpC [H]

Synonym: CLL_A2985

Alternate gene names: 187933860

Gene position: 3076390-3074711 (Counterclockwise)

Preceding gene: 187932645

Following gene: 187934852

Centisome position: 80.95

GC content: 24.7

Gene sequence:

>1680_bases
ATGAAAAGTGATAGAGTTATTAAAAAATCAATAAAAAGTTTACTTACAGGAGTTATATTAGTATCCTTATTAGTTATTTT
TTCTTTAACAACGATAATAAGCATATTCAATATAAAGAATAGTATGACTAATGTTTTGCTAAATAAATCAGTTGAAGTAG
TTAATCAAGTTAAATCTTTAGTTGAATATATAATTGAAAATCAAGATAATGATATTAATCAATTACAAGAACTGGTTGAA
AAAAAGGCTAAATTAGATAACATTGCATATGTAGTTATCGTAGATAAAAATATTAAAGCAATAGCACATAGCGATAAACA
AAAGCTTGGAAAGGTATATGATGATGATTACATTAAAAATGCTGTTAAAGAAGGAGAAACAAAATCTCGTAAATTTTATG
CCGATGTTCAAAAGATTTGGACATATGATATAATTGTTCCTATTGAAGTAAATGGAGAATTATATGGTTCACTAAGGATA
GGAATACCTATCAGTGGAATTGATGCAGTTATAAATGATTTCGCTAAGGTACAAATATTAGTTACTATTATATCATTAGC
TTTACTTACAGTAGTATTAGTTATTCTTTTAAATAAAAGTTTAAAACCATTAAAGGATCTTATGGGAATTATTGATGATA
TAAGTAATTTAAATTTAAAAGAAAATAATCTTTTAGAAAAGTATTCATTAAAACAAGATGAAATAGGTAATATATCTAAG
TCTATTTTAAACATGAGGATAGTTCTTGGAAAAATGGTTGCATCAATAAAAAATACATCTAATGAAATAAATGAATTTTC
AAATAAATTAGTGGATACTACAGAAATGTCTATTAGTTCATTAGATGGAATTTCAAGTGCAATATCAGAAATTGCTAGTG
GTTCACAAAAACAATCAGAAGATATTCAAGAAGAAGTTTCACAAATAAATGATTTAAGTAATGAAATAGATAATATATCT
GATGAAACAATAATAACTTTTGACAAAATAAAGTATACTAGAAATTTAAGTGAACATGGTATTGGTGTTATGAATAATTT
ATCAAATTGCTCTGAAAAGAATAGAGAAATTTCAAATAACATAAAATCTATTGTTATGGATGTTGATAGTAATTCAAAAG
AAATAAGTAGTATAGTTGATACTATTAATGAAATTGCTAATCAAACTAATCTTTTAGCTTTAAATGCATCTATTGAAGCT
GCAAGAGCAGGAGAAAGCGGAAGAGGATTTACAGTGGTTGCAGAAGAAGTTAAAAAACTAGCAGAAGAAACTTCTAAATT
TACTAATGAAATAAGAAGTAAAATTAATGCCATACAAGAAAAATCTAATAATGCCGTTGTTTCTGTTGAAGAAAATATTG
CCGTTGTTAATGAAAATAATCAAGCTGTAGTAGAAACAGAAGATATATTCAATAAACTTTCAAGTGAATTATTTAATTTA
TCAGAAATAATAAATAAAATAGTAAATTATAATAAGACTATGATAGGAAATAAGGATGCAATTTTAGATATAATTCAAAA
TACTTCAGCAGCATCAGAACAAACAACAGCTTCTACACAAGAAATTAGCAGTATATCTAAAGAACAATTATTAAGTATGA
GAATTTTAAGTGAGGAAGTTGATAGATTACAAGAATGTTCAAATATTCTTACAAAAGAGGTTAATAAATTTAAACTTTAA

Upstream 100 bases:

>100_bases
AAGGCTAAATTGTAACTTTAATAGCAAAAAAATATATAATATATGAATTATGTAAAGAAATGTTCGATAATTAAAATAAG
AGAATATAGGGGGGAAAGGC

Downstream 100 bases:

>100_bases
TATTGGAAAAAATGTATATATATGATAAAATAAAGTATATATTTTATATTAATTAAAAAGCAGGAGGTGAAGAACATGAC
AAATTTCTTTTTAGTAAATA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MKSDRVIKKSIKSLLTGVILVSLLVIFSLTTIISIFNIKNSMTNVLLNKSVEVVNQVKSLVEYIIENQDNDINQLQELVE
KKAKLDNIAYVVIVDKNIKAIAHSDKQKLGKVYDDDYIKNAVKEGETKSRKFYADVQKIWTYDIIVPIEVNGELYGSLRI
GIPISGIDAVINDFAKVQILVTIISLALLTVVLVILLNKSLKPLKDLMGIIDDISNLNLKENNLLEKYSLKQDEIGNISK
SILNMRIVLGKMVASIKNTSNEINEFSNKLVDTTEMSISSLDGISSAISEIASGSQKQSEDIQEEVSQINDLSNEIDNIS
DETIITFDKIKYTRNLSEHGIGVMNNLSNCSEKNREISNNIKSIVMDVDSNSKEISSIVDTINEIANQTNLLALNASIEA
ARAGESGRGFTVVAEEVKKLAEETSKFTNEIRSKINAIQEKSNNAVVSVEENIAVVNENNQAVVETEDIFNKLSSELFNL
SEIINKIVNYNKTMIGNKDAILDIIQNTSAASEQTTASTQEISSISKEQLLSMRILSEEVDRLQECSNILTKEVNKFKL

Sequences:

>Translated_559_residues
MKSDRVIKKSIKSLLTGVILVSLLVIFSLTTIISIFNIKNSMTNVLLNKSVEVVNQVKSLVEYIIENQDNDINQLQELVE
KKAKLDNIAYVVIVDKNIKAIAHSDKQKLGKVYDDDYIKNAVKEGETKSRKFYADVQKIWTYDIIVPIEVNGELYGSLRI
GIPISGIDAVINDFAKVQILVTIISLALLTVVLVILLNKSLKPLKDLMGIIDDISNLNLKENNLLEKYSLKQDEIGNISK
SILNMRIVLGKMVASIKNTSNEINEFSNKLVDTTEMSISSLDGISSAISEIASGSQKQSEDIQEEVSQINDLSNEIDNIS
DETIITFDKIKYTRNLSEHGIGVMNNLSNCSEKNREISNNIKSIVMDVDSNSKEISSIVDTINEIANQTNLLALNASIEA
ARAGESGRGFTVVAEEVKKLAEETSKFTNEIRSKINAIQEKSNNAVVSVEENIAVVNENNQAVVETEDIFNKLSSELFNL
SEIINKIVNYNKTMIGNKDAILDIIQNTSAASEQTTASTQEISSISKEQLLSMRILSEEVDRLQECSNILTKEVNKFKL
>Mature_559_residues
MKSDRVIKKSIKSLLTGVILVSLLVIFSLTTIISIFNIKNSMTNVLLNKSVEVVNQVKSLVEYIIENQDNDINQLQELVE
KKAKLDNIAYVVIVDKNIKAIAHSDKQKLGKVYDDDYIKNAVKEGETKSRKFYADVQKIWTYDIIVPIEVNGELYGSLRI
GIPISGIDAVINDFAKVQILVTIISLALLTVVLVILLNKSLKPLKDLMGIIDDISNLNLKENNLLEKYSLKQDEIGNISK
SILNMRIVLGKMVASIKNTSNEINEFSNKLVDTTEMSISSLDGISSAISEIASGSQKQSEDIQEEVSQINDLSNEIDNIS
DETIITFDKIKYTRNLSEHGIGVMNNLSNCSEKNREISNNIKSIVMDVDSNSKEISSIVDTINEIANQTNLLALNASIEA
ARAGESGRGFTVVAEEVKKLAEETSKFTNEIRSKINAIQEKSNNAVVSVEENIAVVNENNQAVVETEDIFNKLSSELFNL
SEIINKIVNYNKTMIGNKDAILDIIQNTSAASEQTTASTQEISSISKEQLLSMRILSEEVDRLQECSNILTKEVNKFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=255, Percent_Identity=27.4509803921569, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1788195, Length=275, Percent_Identity=25.8181818181818, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI2367378, Length=255, Percent_Identity=26.6666666666667, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=165, Percent_Identity=32.7272727272727, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788194, Length=180, Percent_Identity=31.6666666666667, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62047; Mature: 62047

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDRVIKKSIKSLLTGVILVSLLVIFSLTTIISIFNIKNSMTNVLLNKSVEVVNQVKSL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYIIENQDNDINQLQELVEKKAKLDNIAYVVIVDKNIKAIAHSDKQKLGKVYDDDYIKN
HHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHCCCHHHHHHHCCHHHHHH
AVKEGETKSRKFYADVQKIWTYDIIVPIEVNGELYGSLRIGIPISGIDAVINDFAKVQIL
HHHCCCCHHHHHHHHHHHHHEEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHH
VTIISLALLTVVLVILLNKSLKPLKDLMGIIDDISNLNLKENNLLEKYSLKQDEIGNISK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHH
SILNMRIVLGKMVASIKNTSNEINEFSNKLVDTTEMSISSLDGISSAISEIASGSQKQSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DIQEEVSQINDLSNEIDNISDETIITFDKIKYTRNLSEHGIGVMNNLSNCSEKNREISNN
HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHH
IKSIVMDVDSNSKEISSIVDTINEIANQTNLLALNASIEAARAGESGRGFTVVAEEVKKL
HHHHEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHH
AEETSKFTNEIRSKINAIQEKSNNAVVSVEENIAVVNENNQAVVETEDIFNKLSSELFNL
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCEEEEHHHHHHHHHHHHHHH
SEIINKIVNYNKTMIGNKDAILDIIQNTSAASEQTTASTQEISSISKEQLLSMRILSEEV
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLQECSNILTKEVNKFKL
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSDRVIKKSIKSLLTGVILVSLLVIFSLTTIISIFNIKNSMTNVLLNKSVEVVNQVKSL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYIIENQDNDINQLQELVEKKAKLDNIAYVVIVDKNIKAIAHSDKQKLGKVYDDDYIKN
HHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHCCCHHHHHHHCCHHHHHH
AVKEGETKSRKFYADVQKIWTYDIIVPIEVNGELYGSLRIGIPISGIDAVINDFAKVQIL
HHHCCCCHHHHHHHHHHHHHEEEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHH
VTIISLALLTVVLVILLNKSLKPLKDLMGIIDDISNLNLKENNLLEKYSLKQDEIGNISK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHH
SILNMRIVLGKMVASIKNTSNEINEFSNKLVDTTEMSISSLDGISSAISEIASGSQKQSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DIQEEVSQINDLSNEIDNISDETIITFDKIKYTRNLSEHGIGVMNNLSNCSEKNREISNN
HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHH
IKSIVMDVDSNSKEISSIVDTINEIANQTNLLALNASIEAARAGESGRGFTVVAEEVKKL
HHHHEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHH
AEETSKFTNEIRSKINAIQEKSNNAVVSVEENIAVVNENNQAVVETEDIFNKLSSELFNL
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCEEEEHHHHHHHHHHHHHHH
SEIINKIVNYNKTMIGNKDAILDIIQNTSAASEQTTASTQEISSISKEQLLSMRILSEEV
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLQECSNILTKEVNKFKL
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]