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The map label for this gene is yoaR [H]

Identifier: 187933852

GI number: 187933852

Start: 3176072

End: 3177589

Strand: Reverse

Name: yoaR [H]

Synonym: CLL_A3071

Alternate gene names: 187933852

Gene position: 3177589-3176072 (Counterclockwise)

Preceding gene: 187934395

Following gene: 187933079

Centisome position: 83.61

GC content: 31.49

Gene sequence:

>1518_bases
GTGAGCGAAGAGAATAGAAAAAGGGGGAAAGTTCTTAAAAAGGTATCAAGTAATAAAAAGAAAATAATAATAGGAATATG
TGCATTTGCAGTTATTACTTCGGCATTATTTACTGGATATTTTTTATCTATTAGTAAAATAGTAGAGGACTGGAATGATA
AGATATATTTAGGTGTAGCAGTACAAGATATAAATATAGGAGGAATGACTAAAGAAGAGGCTAGAGAAAAATTAGCTCAA
GATCTTCAGGGGCGAATAGGAGATAAAAAGGCAATTATAAAAGTAGATGGTTCAGAATTTGAATTATTGTATTCTGACAT
ATCTCCAGTATATAATCTTGATAATGTTCTAGATGAAGCTATTAATTTTGGGAAAGATCATTCAGCATTGAAAAAATATT
CTTATATAAAGAATAAAGGACAAGAAAAGCATGAGATAAATTTAAATTTATCATATGATGAAGAAAAATTAAAGGCATGT
GAAGAAGCGATAAAAGACAAAGTGCAAACTGAACCTAAGGATGCAACTCTTTCAATTAATGGTAGTAATTTTTCAGTGAT
AGATGAAGTAGTTGGAAAAAGCATAAATATGGAGGAGTTTGATAAAAAATTAAAAGAAGCCATAACAGGACACATAAATG
AAGAAAATATAATTTCGATGGAATTAGAAACGGTACAACCTAAAATTACAAATAAAGATTTATCAAAAATAAATGGAATT
ATTGGTTCATATTCTTCAAATTATGGTACATCATCTGAAGGAAGAAGTACTAATATAGATATTTCAACTAAAGCCATAAA
TGGAGTGGTTTTAATGCCAGGGGATGTATTTAGTTTTAATGAAGTTGTTGGTCCTAGAACAGTTGAAAGAGGCTATAAAG
AAGCAGCAACTTATGTTGGCAATAAGGTAGAACCAGGAATAGGTGGAGGTATATGCCAAGTTTCAACAGCCCTTTATAGA
GCGGTAATGCATGCAAATATAAGATCGGTAGAAAGAAGAAATCATTCGATGTCTGTAGGTTATGCAAAGCCAGGATTAGA
TGCAACTGTTTCTTATGGAGATATAGATTATAAATTTAAAAATAATTATGATTCTCCAATTTATATAGAAGGAAATACAT
ATAATAAGGTTATGACTTACAATATATATGGTAATGTTTCTGAATTAGGTGGAAAAACTTATGATATGGTAAATGAAATA
ATTCAAACTATAGAACCAACTGTAAAAGTAGTAGAAGATGCAACTTTGCCAGAAGGACAAGAAGTAACAGAAAGTGGTGG
AATGACAGGATATAAAGTCAATTCATATCAACTAACATATGAAAATGGTGTTCAAACAAATAAAGAATTAATATCAACTG
ATTATTATACAGCAGTGGATATAGTTGTTAAAAAGGGAACTCAACCATTAATTCCACCAGCAGCTACAGAACAACTTCCA
GGTGCTGTTCCACCTGAAACTCCACAAACAGCTCCACCGGTACCTGGAGACCCAGTAGCTCCGCCGGTAGTTCAATAA

Upstream 100 bases:

>100_bases
TAATAAAACATGCAATTATGTTTAAAGCATAGAATTTTTTATAAAAATATTAGTAGTATTAAACTACTAATTCAGTATAT
TTATTGAAAGGGGAATAAAT

Downstream 100 bases:

>100_bases
TTAAAAAAACAAAAGGTATTATTAATATACCTTTTGTTTTTTTATTCTTTTTTACAAAATATAAAAATTTTAAGGTTTGA
AGCTAATGGTATATAAACTT

Product: vancomycin B-type resistance protein VanW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSEENRKRGKVLKKVSSNKKKIIIGICAFAVITSALFTGYFLSISKIVEDWNDKIYLGVAVQDINIGGMTKEEAREKLAQ
DLQGRIGDKKAIIKVDGSEFELLYSDISPVYNLDNVLDEAINFGKDHSALKKYSYIKNKGQEKHEINLNLSYDEEKLKAC
EEAIKDKVQTEPKDATLSINGSNFSVIDEVVGKSINMEEFDKKLKEAITGHINEENIISMELETVQPKITNKDLSKINGI
IGSYSSNYGTSSEGRSTNIDISTKAINGVVLMPGDVFSFNEVVGPRTVERGYKEAATYVGNKVEPGIGGGICQVSTALYR
AVMHANIRSVERRNHSMSVGYAKPGLDATVSYGDIDYKFKNNYDSPIYIEGNTYNKVMTYNIYGNVSELGGKTYDMVNEI
IQTIEPTVKVVEDATLPEGQEVTESGGMTGYKVNSYQLTYENGVQTNKELISTDYYTAVDIVVKKGTQPLIPPAATEQLP
GAVPPETPQTAPPVPGDPVAPPVVQ

Sequences:

>Translated_505_residues
MSEENRKRGKVLKKVSSNKKKIIIGICAFAVITSALFTGYFLSISKIVEDWNDKIYLGVAVQDINIGGMTKEEAREKLAQ
DLQGRIGDKKAIIKVDGSEFELLYSDISPVYNLDNVLDEAINFGKDHSALKKYSYIKNKGQEKHEINLNLSYDEEKLKAC
EEAIKDKVQTEPKDATLSINGSNFSVIDEVVGKSINMEEFDKKLKEAITGHINEENIISMELETVQPKITNKDLSKINGI
IGSYSSNYGTSSEGRSTNIDISTKAINGVVLMPGDVFSFNEVVGPRTVERGYKEAATYVGNKVEPGIGGGICQVSTALYR
AVMHANIRSVERRNHSMSVGYAKPGLDATVSYGDIDYKFKNNYDSPIYIEGNTYNKVMTYNIYGNVSELGGKTYDMVNEI
IQTIEPTVKVVEDATLPEGQEVTESGGMTGYKVNSYQLTYENGVQTNKELISTDYYTAVDIVVKKGTQPLIPPAATEQLP
GAVPPETPQTAPPVPGDPVAPPVVQ
>Mature_504_residues
SEENRKRGKVLKKVSSNKKKIIIGICAFAVITSALFTGYFLSISKIVEDWNDKIYLGVAVQDINIGGMTKEEAREKLAQD
LQGRIGDKKAIIKVDGSEFELLYSDISPVYNLDNVLDEAINFGKDHSALKKYSYIKNKGQEKHEINLNLSYDEEKLKACE
EAIKDKVQTEPKDATLSINGSNFSVIDEVVGKSINMEEFDKKLKEAITGHINEENIISMELETVQPKITNKDLSKINGII
GSYSSNYGTSSEGRSTNIDISTKAINGVVLMPGDVFSFNEVVGPRTVERGYKEAATYVGNKVEPGIGGGICQVSTALYRA
VMHANIRSVERRNHSMSVGYAKPGLDATVSYGDIDYKFKNNYDSPIYIEGNTYNKVMTYNIYGNVSELGGKTYDMVNEII
QTIEPTVKVVEDATLPEGQEVTESGGMTGYKVNSYQLTYENGVQTNKELISTDYYTAVDIVVKKGTQPLIPPAATEQLPG
AVPPETPQTAPPVPGDPVAPPVVQ

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 55442; Mature: 55311

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEENRKRGKVLKKVSSNKKKIIIGICAFAVITSALFTGYFLSISKIVEDWNDKIYLGVA
CCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
VQDINIGGMTKEEAREKLAQDLQGRIGDKKAIIKVDGSEFELLYSDISPVYNLDNVLDEA
EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHCCCHHHHHHHHHHH
INFGKDHSALKKYSYIKNKGQEKHEINLNLSYDEEKLKACEEAIKDKVQTEPKDATLSIN
HHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEC
GSNFSVIDEVVGKSINMEEFDKKLKEAITGHINEENIISMELETVQPKITNKDLSKINGI
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
IGSYSSNYGTSSEGRSTNIDISTKAINGVVLMPGDVFSFNEVVGPRTVERGYKEAATYVG
HHCCCCCCCCCCCCCCCEEEEEEEEECEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHCC
NKVEPGIGGGICQVSTALYRAVMHANIRSVERRNHSMSVGYAKPGLDATVSYGDIDYKFK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCEEEEEC
NNYDSPIYIEGNTYNKVMTYNIYGNVSELGGKTYDMVNEIIQTIEPTVKVVEDATLPEGQ
CCCCCEEEEECCCCCEEEEEEEECCHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCC
EVTESGGMTGYKVNSYQLTYENGVQTNKELISTDYYTAVDIVVKKGTQPLIPPAATEQLP
HHHHCCCCCEEEECEEEEEECCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHCC
GAVPPETPQTAPPVPGDPVAPPVVQ
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEENRKRGKVLKKVSSNKKKIIIGICAFAVITSALFTGYFLSISKIVEDWNDKIYLGVA
CCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
VQDINIGGMTKEEAREKLAQDLQGRIGDKKAIIKVDGSEFELLYSDISPVYNLDNVLDEA
EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHCCCHHHHHHHHHHH
INFGKDHSALKKYSYIKNKGQEKHEINLNLSYDEEKLKACEEAIKDKVQTEPKDATLSIN
HHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEC
GSNFSVIDEVVGKSINMEEFDKKLKEAITGHINEENIISMELETVQPKITNKDLSKINGI
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
IGSYSSNYGTSSEGRSTNIDISTKAINGVVLMPGDVFSFNEVVGPRTVERGYKEAATYVG
HHCCCCCCCCCCCCCCCEEEEEEEEECEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHCC
NKVEPGIGGGICQVSTALYRAVMHANIRSVERRNHSMSVGYAKPGLDATVSYGDIDYKFK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCEEEEEC
NNYDSPIYIEGNTYNKVMTYNIYGNVSELGGKTYDMVNEIIQTIEPTVKVVEDATLPEGQ
CCCCCEEEEECCCCCEEEEEEEECCHHHHCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCC
EVTESGGMTGYKVNSYQLTYENGVQTNKELISTDYYTAVDIVVKKGTQPLIPPAATEQLP
HHHHCCCCCEEEECEEEEEECCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHCC
GAVPPETPQTAPPVPGDPVAPPVVQ
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]