| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933811
Identifier: 187933811
GI number: 187933811
Start: 2499816
End: 2500403
Strand: Reverse
Name: 187933811
Synonym: CLL_A2410
Alternate gene names: NA
Gene position: 2500403-2499816 (Counterclockwise)
Preceding gene: 187932815
Following gene: 187933333
Centisome position: 65.79
GC content: 22.28
Gene sequence:
>588_bases ATGAATTTATTAAAGGAACTAGTAACAACCTTAGTGACTGCACTTATATTTATAACAGCAATAGAACTTATAAGTCCTAA TAATAGTATGAACAAATATTTGAAGTTTATATTAGGATTAGTTTTAATAACCATAATATTAAATCCAATAGTAAAAATTA TTTCAAATGGACAAAACAATATATATGATTCTATAAGTGATTATGAAGAAGTATTTTCTAATTATAAAAATGAAGTTAAA AGTAGTGCCGAGAATGAATTAAAGGATGGAGACTTAAAAAAACAAGCTTTTGAAGAAAATTTTAATAAGAATTGTGAAAG CTTGCTTAAATCGCAGTATCCAAATAAAAAATTTAAAAGTGATGTTGAATGTGTAGTTAATTTTAATACTATGATTTTTG ATATAAAAAAAATAAAAATAGGTATAAGTGAAAAGTCAGTAAGTAAAATTAAAAAGGTGATAATTAATAAAAGTGATAAA TCTTATGAAGATAATCAAAATAGTCAGTATAAAGAAATAGTGACATTTATAAGCGAACAGTTAGATATTCCTAAAGAAAA AATAGAAGTATATAAAATAGAGGAATAG
Upstream 100 bases:
>100_bases GACGTTAATTATATCATGTGTTTTAAGTGTAAGTTTAATGTTTTTTATTTTAATAGCTCTTGTTGCATCCTCAGGGCTGT TTATAGTAGGAGGATAAGAC
Downstream 100 bases:
>100_bases GAGATGAGTTTATGGATAAAAAAAAAATTTCTAATAATCTAAAGAAAATATTAGGCGAAAAAAAATTAAGCAATCTTATT TCTATTTGCTTAGTATTAGC
Product: stage III sporulation protein af, spoiiiaf
Products: NA
Alternate protein names: Stage III Sporulation Protein IIIAF; Stage III Sporulation Protein iiiaf; Sporulation Stage III; Sporulation Stage III Protein AF
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNLLKELVTTLVTALIFITAIELISPNNSMNKYLKFILGLVLITIILNPIVKIISNGQNNIYDSISDYEEVFSNYKNEVK SSAENELKDGDLKKQAFEENFNKNCESLLKSQYPNKKFKSDVECVVNFNTMIFDIKKIKIGISEKSVSKIKKVIINKSDK SYEDNQNSQYKEIVTFISEQLDIPKEKIEVYKIEE
Sequences:
>Translated_195_residues MNLLKELVTTLVTALIFITAIELISPNNSMNKYLKFILGLVLITIILNPIVKIISNGQNNIYDSISDYEEVFSNYKNEVK SSAENELKDGDLKKQAFEENFNKNCESLLKSQYPNKKFKSDVECVVNFNTMIFDIKKIKIGISEKSVSKIKKVIINKSDK SYEDNQNSQYKEIVTFISEQLDIPKEKIEVYKIEE >Mature_195_residues MNLLKELVTTLVTALIFITAIELISPNNSMNKYLKFILGLVLITIILNPIVKIISNGQNNIYDSISDYEEVFSNYKNEVK SSAENELKDGDLKKQAFEENFNKNCESLLKSQYPNKKFKSDVECVVNFNTMIFDIKKIKIGISEKSVSKIKKVIINKSDK SYEDNQNSQYKEIVTFISEQLDIPKEKIEVYKIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22466; Mature: 22466
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKELVTTLVTALIFITAIELISPNNSMNKYLKFILGLVLITIILNPIVKIISNGQNN CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IYDSISDYEEVFSNYKNEVKSSAENELKDGDLKKQAFEENFNKNCESLLKSQYPNKKFKS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCHHHH DVECVVNFNTMIFDIKKIKIGISEKSVSKIKKVIINKSDKSYEDNQNSQYKEIVTFISEQ HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LDIPKEKIEVYKIEE HCCCHHHHHHHCCCC >Mature Secondary Structure MNLLKELVTTLVTALIFITAIELISPNNSMNKYLKFILGLVLITIILNPIVKIISNGQNN CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IYDSISDYEEVFSNYKNEVKSSAENELKDGDLKKQAFEENFNKNCESLLKSQYPNKKFKS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCHHHH DVECVVNFNTMIFDIKKIKIGISEKSVSKIKKVIINKSDKSYEDNQNSQYKEIVTFISEQ HHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LDIPKEKIEVYKIEE HCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA