Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187933607

Identifier: 187933607

GI number: 187933607

Start: 427810

End: 428919

Strand: Reverse

Name: 187933607

Synonym: CLL_A0415

Alternate gene names: NA

Gene position: 428919-427810 (Counterclockwise)

Preceding gene: 187934728

Following gene: 187935623

Centisome position: 11.29

GC content: 22.07

Gene sequence:

>1110_bases
ATGATGGCATCTTATTACTTATATTCTTTCTATAATAAATCTGATGTTGACAGTAATGATTATGAAAGATTTTCTAATGA
AATTTTATGTGTATTAAGAGATTACAAAGAATCTCTTTATGACTTATCATTTGAAGAAAACTTAAATATCTTATTATGCT
TAAATATTTTTTACAAGTATTCAGAAAACTCTATAGCTAAAGACTTAATATTAGACTTAAGTGATTTTTTAATAAATAGG
TTTATGATAAAAGATTATTATGTTAATTCATTAGAAAATTGTTGTTTATTAGCTATATGCTTAATGGAATCTTACAAACA
TACAAATATAATTTCTTTTAAAGAAACTAGTAAAGAAATTAATGATAAATTATTAAGTCTATATGATACTGATAAAAATA
TTTTTATTAAACTTACAGATAAAAAAGAAACTAAATATTCTTGCTTAGAAATAAATCTTTATTTGTTATCTTTAATGATT
CATGCAAAAGAAGAAGATAAAATCTCAGAATTAAAACCTATTATATCTAACATATATAGAAAACTTTATGTGAATAATAA
TCTGTTAACAAGTTGGCCTGAAGCTCCAACTTTAGATGAAGTAGAAAGATATAAAAATTTAAGCTTAAAATCCCAAGATA
TGCTAGATGAAACTTATTTTAGAATGCCTAACTTACCTACTCCAGAAAGTAATGGATTAGCTCCTATATTTGTTAAAAAC
TTAAGTTATTCTAGAAAAAAAGATTGTTTTACAGTACCTAAAGTATCCTTTGATTCAAATAAAAACATGTTTTCTTTTCT
ATTATTTATATATTTTCTTAAAGACGATATTGAAAAAGAAATGGGATTTAATAAAAACAAAATAAATATGACCGATTGTA
GAACTACAACAAATATTAATGATGAAGTGAGTGATGAAATTAATAATGAGATTATTAATTCATCAGAACTAAATGATATT
GAAATAGAAGATATTGATGTTAGTACAAACTCAAATTTAAAAGTTCCTGATTCTCCAAAATTAACAACCGATCTAAGCAA
AACAACATCTAATTCATATAATAAATCAAAAAAATCGTCTAAAGATAGATATAATAATAAAAAAAGTTAA

Upstream 100 bases:

>100_bases
AGGGGTTTTTGTTGATAAAAAAAATACGTCTGATGGAAATTCTAAGGGTTTTAACCTAATAGATAAAAATGATAAATTCA
AATTCTGTGACCAAGCTTTT

Downstream 100 bases:

>100_bases
TACAGTATTGTAAAATATATAAGGCTATATCATTGATGTATTACCATTGATATAGCCTTAATCTATATTAAACTATTTTA
TAGATGAAAAATCCATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MMASYYLYSFYNKSDVDSNDYERFSNEILCVLRDYKESLYDLSFEENLNILLCLNIFYKYSENSIAKDLILDLSDFLINR
FMIKDYYVNSLENCCLLAICLMESYKHTNIISFKETSKEINDKLLSLYDTDKNIFIKLTDKKETKYSCLEINLYLLSLMI
HAKEEDKISELKPIISNIYRKLYVNNNLLTSWPEAPTLDEVERYKNLSLKSQDMLDETYFRMPNLPTPESNGLAPIFVKN
LSYSRKKDCFTVPKVSFDSNKNMFSFLLFIYFLKDDIEKEMGFNKNKINMTDCRTTTNINDEVSDEINNEIINSSELNDI
EIEDIDVSTNSNLKVPDSPKLTTDLSKTTSNSYNKSKKSSKDRYNNKKS

Sequences:

>Translated_369_residues
MMASYYLYSFYNKSDVDSNDYERFSNEILCVLRDYKESLYDLSFEENLNILLCLNIFYKYSENSIAKDLILDLSDFLINR
FMIKDYYVNSLENCCLLAICLMESYKHTNIISFKETSKEINDKLLSLYDTDKNIFIKLTDKKETKYSCLEINLYLLSLMI
HAKEEDKISELKPIISNIYRKLYVNNNLLTSWPEAPTLDEVERYKNLSLKSQDMLDETYFRMPNLPTPESNGLAPIFVKN
LSYSRKKDCFTVPKVSFDSNKNMFSFLLFIYFLKDDIEKEMGFNKNKINMTDCRTTTNINDEVSDEINNEIINSSELNDI
EIEDIDVSTNSNLKVPDSPKLTTDLSKTTSNSYNKSKKSSKDRYNNKKS
>Mature_369_residues
MMASYYLYSFYNKSDVDSNDYERFSNEILCVLRDYKESLYDLSFEENLNILLCLNIFYKYSENSIAKDLILDLSDFLINR
FMIKDYYVNSLENCCLLAICLMESYKHTNIISFKETSKEINDKLLSLYDTDKNIFIKLTDKKETKYSCLEINLYLLSLMI
HAKEEDKISELKPIISNIYRKLYVNNNLLTSWPEAPTLDEVERYKNLSLKSQDMLDETYFRMPNLPTPESNGLAPIFVKN
LSYSRKKDCFTVPKVSFDSNKNMFSFLLFIYFLKDDIEKEMGFNKNKINMTDCRTTTNINDEVSDEINNEIINSSELNDI
EIEDIDVSTNSNLKVPDSPKLTTDLSKTTSNSYNKSKKSSKDRYNNKKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43261; Mature: 43261

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMASYYLYSFYNKSDVDSNDYERFSNEILCVLRDYKESLYDLSFEENLNILLCLNIFYKY
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHH
SENSIAKDLILDLSDFLINRFMIKDYYVNSLENCCLLAICLMESYKHTNIISFKETSKEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
NDKLLSLYDTDKNIFIKLTDKKETKYSCLEINLYLLSLMIHAKEEDKISELKPIISNIYR
HHHHHHHEECCCEEEEEEECCCCCCEEHEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLYVNNNLLTSWPEAPTLDEVERYKNLSLKSQDMLDETYFRMPNLPTPESNGLAPIFVKN
HHHCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC
LSYSRKKDCFTVPKVSFDSNKNMFSFLLFIYFLKDDIEKEMGFNKNKINMTDCRTTTNIN
CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC
DEVSDEINNEIINSSELNDIEIEDIDVSTNSNLKVPDSPKLTTDLSKTTSNSYNKSKKSS
HHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHHHHCCCHHHHHHHH
KDRYNNKKS
HHHCCCCCC
>Mature Secondary Structure
MMASYYLYSFYNKSDVDSNDYERFSNEILCVLRDYKESLYDLSFEENLNILLCLNIFYKY
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHH
SENSIAKDLILDLSDFLINRFMIKDYYVNSLENCCLLAICLMESYKHTNIISFKETSKEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
NDKLLSLYDTDKNIFIKLTDKKETKYSCLEINLYLLSLMIHAKEEDKISELKPIISNIYR
HHHHHHHEECCCEEEEEEECCCCCCEEHEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLYVNNNLLTSWPEAPTLDEVERYKNLSLKSQDMLDETYFRMPNLPTPESNGLAPIFVKN
HHHCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC
LSYSRKKDCFTVPKVSFDSNKNMFSFLLFIYFLKDDIEKEMGFNKNKINMTDCRTTTNIN
CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC
DEVSDEINNEIINSSELNDIEIEDIDVSTNSNLKVPDSPKLTTDLSKTTSNSYNKSKKSS
HHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHHHHCCCHHHHHHHH
KDRYNNKKS
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA