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The map label for this gene is tmpC [H]

Identifier: 187933525

GI number: 187933525

Start: 3059338

End: 3060441

Strand: Reverse

Name: tmpC [H]

Synonym: CLL_A2974

Alternate gene names: 187933525

Gene position: 3060441-3059338 (Counterclockwise)

Preceding gene: 187933813

Following gene: 187935773

Centisome position: 80.53

GC content: 33.51

Gene sequence:

>1104_bases
ATGAAAAAGAAATTATTATCATTATTAGCTATTTCTGCAATAACAGTATCAATGTTTGCTGGTTGTGGAGGATCTGGTAC
AGGAACTAGTGATTCAAAGGGTGGAGAACAAATTAAAGTAGGTATGGTTACAGACTCAGGAACAATAGATGATAAGTCAT
TTAACCAAGGTACTTGGGAAGGAATACTAAAGGCTGAAAAAGATCTTGGAATTGCACAACCTAAATACTTAAAGCCTAAT
GGAGAAACAGAAGCAGATTATATGAAAGAAATTGGAAATCTTTATGATGCTGGATTTAGATTAATAGCTACTCCAGGATT
TAAATTTGAAACTGCAATATTTAAATCACAAGAAAAATATAAAGATGCAAAATTTGTTTTAATTGATGGTACTCCAAATA
ATGGTGGAAAAACTCCAGAATATAAAGTAGATGAAAACAGTGTTTCTATTTTATTTGCTGAACATCAAGCAGGATTTTTA
GCAGGTGTTGCTACATCTGTTGAATTAAAAGAAGGAGACCTAGGATTTATAGGTGGTATGGAAATACCATCAGTACAAAA
ATTCAACTGGGGATTCCAACAAGGTGTTGCTTATGCTAATGAAAATTTAGGAACTAAAATGTCATTAAAAGCAGACAATA
TAATATATCAAGGTACTTTCAATGATACAGCAGCAGGACAACAATTAGCAGCTCAAATGTATGACAGAGGCGTTAAAGCT
ATATTCTGTGCAGCTGGTGGAGTTGGTAATGGAGTTATAACAGAAGCTAAGACTAGAATCGGATCAGGTAGTCAAGTATG
GGTAGTTGGTGTTGATAGAGATCAATTTGATGATGGTGTATATGCAGATGGTAAATCAGTAATTCTTACTTCAGCAGTTA
AAAAAGTAGAAGCTGCAAGTTTTGATATGGTAAAAGCAGTTAAAGAAGGAACTTTCCCAGGAGGTCAAACTTTAACATTT
GATGTTACAAAAGATGCAGTAGGTATTCCAGCAAAGAATCCTAACTTATCAGAAGCAACAATGAAAACAGTTGCTGAAGT
AAATGAAAAAGTTAAAGATGGAACAATAACAGTTGCAGGTGAACAAGGAAACTTAGTAAAATAA

Upstream 100 bases:

>100_bases
AATCTACATAATATACTAAATTAATTTGAATTTAAGTTATAAATTTCATTTATAATTTGTAACTTGAAATATATTATTAA
AAATAGTAGGAGGAAAAGCA

Downstream 100 bases:

>100_bases
TATCTGTTTTATTAAATAAATATTATTTTAAGTAATAACAATTGAAGAAAACTTTTATTAAATAATATAATAAGTTTTCT
TCATTGTTAAATATTATATA

Product: membrane lipoprotein tmpc

Products: NA

Alternate protein names: Membrane protein C; 35 kDa antigen; Lipoprotein TpN35 [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKKKLLSLLAISAITVSMFAGCGGSGTGTSDSKGGEQIKVGMVTDSGTIDDKSFNQGTWEGILKAEKDLGIAQPKYLKPN
GETEADYMKEIGNLYDAGFRLIATPGFKFETAIFKSQEKYKDAKFVLIDGTPNNGGKTPEYKVDENSVSILFAEHQAGFL
AGVATSVELKEGDLGFIGGMEIPSVQKFNWGFQQGVAYANENLGTKMSLKADNIIYQGTFNDTAAGQQLAAQMYDRGVKA
IFCAAGGVGNGVITEAKTRIGSGSQVWVVGVDRDQFDDGVYADGKSVILTSAVKKVEAASFDMVKAVKEGTFPGGQTLTF
DVTKDAVGIPAKNPNLSEATMKTVAEVNEKVKDGTITVAGEQGNLVK

Sequences:

>Translated_367_residues
MKKKLLSLLAISAITVSMFAGCGGSGTGTSDSKGGEQIKVGMVTDSGTIDDKSFNQGTWEGILKAEKDLGIAQPKYLKPN
GETEADYMKEIGNLYDAGFRLIATPGFKFETAIFKSQEKYKDAKFVLIDGTPNNGGKTPEYKVDENSVSILFAEHQAGFL
AGVATSVELKEGDLGFIGGMEIPSVQKFNWGFQQGVAYANENLGTKMSLKADNIIYQGTFNDTAAGQQLAAQMYDRGVKA
IFCAAGGVGNGVITEAKTRIGSGSQVWVVGVDRDQFDDGVYADGKSVILTSAVKKVEAASFDMVKAVKEGTFPGGQTLTF
DVTKDAVGIPAKNPNLSEATMKTVAEVNEKVKDGTITVAGEQGNLVK
>Mature_367_residues
MKKKLLSLLAISAITVSMFAGCGGSGTGTSDSKGGEQIKVGMVTDSGTIDDKSFNQGTWEGILKAEKDLGIAQPKYLKPN
GETEADYMKEIGNLYDAGFRLIATPGFKFETAIFKSQEKYKDAKFVLIDGTPNNGGKTPEYKVDENSVSILFAEHQAGFL
AGVATSVELKEGDLGFIGGMEIPSVQKFNWGFQQGVAYANENLGTKMSLKADNIIYQGTFNDTAAGQQLAAQMYDRGVKA
IFCAAGGVGNGVITEAKTRIGSGSQVWVVGVDRDQFDDGVYADGKSVILTSAVKKVEAASFDMVKAVKEGTFPGGQTLTF
DVTKDAVGIPAKNPNLSEATMKTVAEVNEKVKDGTITVAGEQGNLVK

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38833; Mature: 38833

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLLSLLAISAITVSMFAGCGGSGTGTSDSKGGEQIKVGMVTDSGTIDDKSFNQGTWE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHH
GILKAEKDLGIAQPKYLKPNGETEADYMKEIGNLYDAGFRLIATPGFKFETAIFKSQEKY
HHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHCHHHC
KDAKFVLIDGTPNNGGKTPEYKVDENSVSILFAEHQAGFLAGVATSVELKEGDLGFIGGM
CCEEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEEEEEEECCCEEEECCC
EIPSVQKFNWGFQQGVAYANENLGTKMSLKADNIIYQGTFNDTAAGQQLAAQMYDRGVKA
CCCCCCCCCCCHHHCHHHHCCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEE
IFCAAGGVGNGVITEAKTRIGSGSQVWVVGVDRDQFDDGVYADGKSVILTSAVKKVEAAS
EEEECCCCCCCCEEHHHHHCCCCCEEEEEECCCCCCCCCEECCCCEEEEHHHHHHHHHHH
FDMVKAVKEGTFPGGQTLTFDVTKDAVGIPAKNPNLSEATMKTVAEVNEKVKDGTITVAG
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC
EQGNLVK
CCCCCCC
>Mature Secondary Structure
MKKKLLSLLAISAITVSMFAGCGGSGTGTSDSKGGEQIKVGMVTDSGTIDDKSFNQGTWE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHH
GILKAEKDLGIAQPKYLKPNGETEADYMKEIGNLYDAGFRLIATPGFKFETAIFKSQEKY
HHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHCHHHC
KDAKFVLIDGTPNNGGKTPEYKVDENSVSILFAEHQAGFLAGVATSVELKEGDLGFIGGM
CCEEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEEEEEEECCCEEEECCC
EIPSVQKFNWGFQQGVAYANENLGTKMSLKADNIIYQGTFNDTAAGQQLAAQMYDRGVKA
CCCCCCCCCCCHHHCHHHHCCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEE
IFCAAGGVGNGVITEAKTRIGSGSQVWVVGVDRDQFDDGVYADGKSVILTSAVKKVEAAS
EEEECCCCCCCCEEHHHHHCCCCCEEEEEECCCCCCCCCEECCCCEEEEHHHHHHHHHHH
FDMVKAVKEGTFPGGQTLTFDVTKDAVGIPAKNPNLSEATMKTVAEVNEKVKDGTITVAG
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC
EQGNLVK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1894360; 9665876 [H]