| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933457
Identifier: 187933457
GI number: 187933457
Start: 2344779
End: 2345936
Strand: Reverse
Name: 187933457
Synonym: CLL_A2259
Alternate gene names: NA
Gene position: 2345936-2344779 (Counterclockwise)
Preceding gene: 187932699
Following gene: 187933949
Centisome position: 61.73
GC content: 26.51
Gene sequence:
>1158_bases TTGAAAATAATTAATTTTTTAAGGGACTTTTTTGGCTCAAAAAATACTGTATATCTAAATGAAAAAGTTGATAGTGTATG TACTAATTTAGCAATTGATGCATTTGCACTTCAAACTGGTATTAATCTTATAGCTTCATGCGTTGCTAAGTGTGAGTTTA AAACTTTTTTAAATAAAAAAGAAGTGAATTCAGATGAATACTATCTTTGGAATATTGAACCTAACAAAAATCAAAATTCA AGTGAATTTATTCAAGAGTTTGTAAGTAAGTTACTTTTAAACAATGAAGTACTAATTGTAGAATTTAATAATGAATTGAT TATTGCAGATTCTTTTTATAGAGAAGAACATGCAATATATGAAGATTATTTTGAACAAGTAACTAAAAAAGATTTTACTT TTGATAAAAAGTTCTATATGAAAGATGTGCTGTATTTTAAATATAACAATGATGATATAAGAAAATACTACAATAATTTG ATGATAGGATATAATGAACTTTTATCACTTGCTAAAGGTAAATATAAGCGTGCTGGAGGTCGTAAGGGTACAGTAGAACT TGATGCAATAGCCAAAGGTGATGAAGAGAAAAGAAAACAAATTGAAGAACTATTTACAAAAAAGTTTAAAAATTACTTTG AAGCTGAAAATGCTATTGTAGATCTTCCAAAGGGTGTTAAATATACTGAAATAACTGGTGAAGGAAGTAAAAAAGCTACA AATGAACTTGGAGATATTACAAGAATACTTGATGATGCATTTACAAGAGCAGCACAAGCACTTAGAATGTCACCAGCTTT ATTAAAAGGTGATATTGCTGATATAGATAAAATAACAAATAATTTTTTAACTTTTTGTATAGATCCTATAGTTGACCTTA TTCAAACTGAAATTAATCGAAAAAGGTATGGGAAATCTAATTTTTTTAAAGGCAGCTATCTATATGTTGATATTACTAAT ATCAAGCATATAGATATATTTAGTATTGCTGAAAAAATTGATAAGCTCATTGCTTGTGGTATGTATAGCATTGATGATTT AAAGAAGAAATTAAAAGATACTGTTTTAAATACTGAATGGAGTGAGAAACATTGGATTACAAAAAACTATCAAGGAATAA ATGAAATTAATTCGAAGGAAGGTGAGAATAGTGAATAA
Upstream 100 bases:
>100_bases AAAAATTAGAAATGAAATTAAAGAAAAAATATTATCAGTTGTAGAAATTAAGCCTTAATTAATAAGGCTTTTTTATTTTG GGCTGAAAGGGGGTGAAGGA
Downstream 100 bases:
>100_bases AACTATGTTTAGTATAAAACAACAGGCTAACAAGCCAAATGTATTAGATATTTATATTTATGATAATGTAGAGGGAGATT CATATAACTGGTGGACTGGT
Product: phage portal protein, HK97 family
Products: NA
Alternate protein names: HK97 Family Phage Portal Protein; Phage Portal Protein HK
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKIINFLRDFFGSKNTVYLNEKVDSVCTNLAIDAFALQTGINLIASCVAKCEFKTFLNKKEVNSDEYYLWNIEPNKNQNS SEFIQEFVSKLLLNNEVLIVEFNNELIIADSFYREEHAIYEDYFEQVTKKDFTFDKKFYMKDVLYFKYNNDDIRKYYNNL MIGYNELLSLAKGKYKRAGGRKGTVELDAIAKGDEEKRKQIEELFTKKFKNYFEAENAIVDLPKGVKYTEITGEGSKKAT NELGDITRILDDAFTRAAQALRMSPALLKGDIADIDKITNNFLTFCIDPIVDLIQTEINRKRYGKSNFFKGSYLYVDITN IKHIDIFSIAEKIDKLIACGMYSIDDLKKKLKDTVLNTEWSEKHWITKNYQGINEINSKEGENSE
Sequences:
>Translated_385_residues MKIINFLRDFFGSKNTVYLNEKVDSVCTNLAIDAFALQTGINLIASCVAKCEFKTFLNKKEVNSDEYYLWNIEPNKNQNS SEFIQEFVSKLLLNNEVLIVEFNNELIIADSFYREEHAIYEDYFEQVTKKDFTFDKKFYMKDVLYFKYNNDDIRKYYNNL MIGYNELLSLAKGKYKRAGGRKGTVELDAIAKGDEEKRKQIEELFTKKFKNYFEAENAIVDLPKGVKYTEITGEGSKKAT NELGDITRILDDAFTRAAQALRMSPALLKGDIADIDKITNNFLTFCIDPIVDLIQTEINRKRYGKSNFFKGSYLYVDITN IKHIDIFSIAEKIDKLIACGMYSIDDLKKKLKDTVLNTEWSEKHWITKNYQGINEINSKEGENSE >Mature_385_residues MKIINFLRDFFGSKNTVYLNEKVDSVCTNLAIDAFALQTGINLIASCVAKCEFKTFLNKKEVNSDEYYLWNIEPNKNQNS SEFIQEFVSKLLLNNEVLIVEFNNELIIADSFYREEHAIYEDYFEQVTKKDFTFDKKFYMKDVLYFKYNNDDIRKYYNNL MIGYNELLSLAKGKYKRAGGRKGTVELDAIAKGDEEKRKQIEELFTKKFKNYFEAENAIVDLPKGVKYTEITGEGSKKAT NELGDITRILDDAFTRAAQALRMSPALLKGDIADIDKITNNFLTFCIDPIVDLIQTEINRKRYGKSNFFKGSYLYVDITN IKHIDIFSIAEKIDKLIACGMYSIDDLKKKLKDTVLNTEWSEKHWITKNYQGINEINSKEGENSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44678; Mature: 44678
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIINFLRDFFGSKNTVYLNEKVDSVCTNLAIDAFALQTGINLIASCVAKCEFKTFLNKK CHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH EVNSDEYYLWNIEPNKNQNSSEFIQEFVSKLLLNNEVLIVEFNNELIIADSFYREEHAIY CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEHHHHHHHHHH EDYFEQVTKKDFTFDKKFYMKDVLYFKYNNDDIRKYYNNLMIGYNELLSLAKGKYKRAGG HHHHHHHHHCCCCCCHHHHHHEEEEEEECCHHHHHHHHHHHHCHHHHHHHHCCHHHHCCC RKGTVELDAIAKGDEEKRKQIEELFTKKFKNYFEAENAIVDLPKGVKYTEITGEGSKKAT CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCHHHH NELGDITRILDDAFTRAAQALRMSPALLKGDIADIDKITNNFLTFCIDPIVDLIQTEINR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRYGKSNFFKGSYLYVDITNIKHIDIFSIAEKIDKLIACGMYSIDDLKKKLKDTVLNTEW HHCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SEKHWITKNYQGINEINSKEGENSE CCCCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MKIINFLRDFFGSKNTVYLNEKVDSVCTNLAIDAFALQTGINLIASCVAKCEFKTFLNKK CHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH EVNSDEYYLWNIEPNKNQNSSEFIQEFVSKLLLNNEVLIVEFNNELIIADSFYREEHAIY CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEHHHHHHHHHH EDYFEQVTKKDFTFDKKFYMKDVLYFKYNNDDIRKYYNNLMIGYNELLSLAKGKYKRAGG HHHHHHHHHCCCCCCHHHHHHEEEEEEECCHHHHHHHHHHHHCHHHHHHHHCCHHHHCCC RKGTVELDAIAKGDEEKRKQIEELFTKKFKNYFEAENAIVDLPKGVKYTEITGEGSKKAT CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCHHHH NELGDITRILDDAFTRAAQALRMSPALLKGDIADIDKITNNFLTFCIDPIVDLIQTEINR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRYGKSNFFKGSYLYVDITNIKHIDIFSIAEKIDKLIACGMYSIDDLKKKLKDTVLNTEW HHCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SEKHWITKNYQGINEINSKEGENSE CCCCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA