| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ypfL [H]
Identifier: 187933294
GI number: 187933294
Start: 2185704
End: 2186765
Strand: Reverse
Name: ypfL [H]
Synonym: CLL_A2088
Alternate gene names: 187933294
Gene position: 2186765-2185704 (Counterclockwise)
Preceding gene: 187934502
Following gene: 187932365
Centisome position: 57.54
GC content: 28.53
Gene sequence:
>1062_bases ATGTATGAATGTCCTATATGTGGAAGAAAAAAATATGTTCAAGGTGTATGTCTAGATTGTCAGTCAAAATTGGAAAGAGA AGCTTATGAATCATTGTCAGATGAAGAAATTAATATTCAAATTAAAGAAATAATTAATAATATTAAAGATGACGAGTATA TTGATAAAGCTAAAAATATAATTAGCTATACAAATGTAGATACCTCTGAAATTGCAGAGGCTGCTTGTAATAATGAAATA TATTATCCAAAGGAACTTTATAAAGATGCATCAGAAAAGGTTAGAGGTAAGCTTATTGAAAGATTAAAGAATACGGAACA TTCATTAACTGCTAATAAATTATTAGAATGTCTTGCAATAATATGTGATGATGTTGTTTTAAATGCTTTCTATGAATTTG AAAAGAATGCTCCAAAGTGGAGAGAAAAATTATATGTTAATCCATCGGTATATGCAGAAAGTGGAGGATGGACATTTGAT GAAAACAAGAAAAAAATAAACTTAGCTTATGATGATTGCTATGTCATGTTTGAGGATAAAGAAATAAGTGATGAAGCTAT TATTGTAGGAGCAATAAGTGATGAAAGATGTTCCGCATGTAATTCAAAGCTTGTAGATATTTTGTCTATTGATGGAAATG ATGAAAGGTTAAAATTTATTAATTTAAAAGGAAAGATAAATATAAAGGTATGTTTAAATTGTCTTCCATATGAAGATGAG TTCTGTAAATTTGATTTGGATGGTAGAAGTGAACTTATGCCATTTGAAGGCTATGAATGTGATGACGATGATGAAATAGA AGAAGTGACTTCAAAGCATTTTACTTTATCAAAAGAGAAAGTAAGCAAGTATTATGGTTCTTTTAGTGAAGATCTAATCA CAATAGGTGGAAGAGGAAACTTTGTTAATGACTGTATTCATTTAGAATGTCCATGCTGCAAGAATAAAATGAAATATTTA GCTCAGATTCAGAGCAATTCAATTAATCTTTATGATGGAACAATGTATTTCTACATATGTGAAGATTGTAAGGTGGTTGG AATTAATTATCAACAAACATAA
Upstream 100 bases:
>100_bases AGTTAAGCATAATCTATATTTTCAAGTCTTAAATAATAAATATTTATATAGAATATGGTAAAATATATATGTTAATTATA AAGATGGGTGGGAAATAGGA
Downstream 100 bases:
>100_bases TTAATTATAAACTTGCACATAACTTTTATTATTTATGAAGAGGAGTCTATGTAATATAGGCTCTTATTTTTGTACTTAAA TGTAATATTTATGGTGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF79 [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNIISYTNVDTSEIAEAACNNEI YYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAIICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFD ENKKKINLAYDDCYVMFEDKEISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGNFVNDCIHLECPCCKNKMKYL AQIQSNSINLYDGTMYFYICEDCKVVGINYQQT
Sequences:
>Translated_353_residues MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNIISYTNVDTSEIAEAACNNEI YYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAIICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFD ENKKKINLAYDDCYVMFEDKEISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGNFVNDCIHLECPCCKNKMKYL AQIQSNSINLYDGTMYFYICEDCKVVGINYQQT >Mature_353_residues MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNIISYTNVDTSEIAEAACNNEI YYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAIICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFD ENKKKINLAYDDCYVMFEDKEISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGNFVNDCIHLECPCCKNKMKYL AQIQSNSINLYDGTMYFYICEDCKVVGINYQQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40652; Mature: 40652
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHH ISYTNVDTSEIAEAACNNEIYYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAI HEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFDENKKKINLAYDDCYVMFEDK HHHHHHHHHHHHHCCCCCCHHHEEECCCCEEECCCCCEECCCCCEEEEEEEEEEEEEECC EISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE CCCCCEEEEEECCCHHHHHHCCCCEEEEEECCCCCEEEEEEECCEEEEEEEEEECCCCCC FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGN CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCC FVNDCIHLECPCCKNKMKYLAQIQSNSINLYDGTMYFYICEDCKVVGINYQQT EECCEEEEECCHHHHHHHHHHHHHCCCEEEEECEEEEEEECCCEEEEEECCCC >Mature Secondary Structure MYECPICGRKKYVQGVCLDCQSKLEREAYESLSDEEINIQIKEIINNIKDDEYIDKAKNI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHH ISYTNVDTSEIAEAACNNEIYYPKELYKDASEKVRGKLIERLKNTEHSLTANKLLECLAI HEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ICDDVVLNAFYEFEKNAPKWREKLYVNPSVYAESGGWTFDENKKKINLAYDDCYVMFEDK HHHHHHHHHHHHHCCCCCCHHHEEECCCCEEECCCCCEECCCCCEEEEEEEEEEEEEECC EISDEAIIVGAISDERCSACNSKLVDILSIDGNDERLKFINLKGKINIKVCLNCLPYEDE CCCCCEEEEEECCCHHHHHHCCCCEEEEEECCCCCEEEEEEECCEEEEEEEEEECCCCCC FCKFDLDGRSELMPFEGYECDDDDEIEEVTSKHFTLSKEKVSKYYGSFSEDLITIGGRGN CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCC FVNDCIHLECPCCKNKMKYLAQIQSNSINLYDGTMYFYICEDCKVVGINYQQT EECCEEEEECCHHHHHHHHHHHHHCCCEEEEECEEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10464203; 11677609 [H]