Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is 187933193

Identifier: 187933193

GI number: 187933193

Start: 3744282

End: 3745097

Strand: Reverse

Name: 187933193

Synonym: CLL_A3536

Alternate gene names: NA

Gene position: 3745097-3744282 (Counterclockwise)

Preceding gene: 187932438

Following gene: 187934421

Centisome position: 98.55

GC content: 27.21

Gene sequence:

>816_bases
ATGGACAGAAAATTAAATGAAAACATAGATGAAAAAATTATAGATTGTTTAAATAAAAAATCTGATGGAATTTCAGCTCC
AGAAAATATGTTTTTTAAAATTAGAGCTGGAATTTTAGAGGAAGAAGATAGAGGAGTGTTATTTAATATGAAAATTAAAT
TTTTAAAAGCAAAAACTATGATAGTAGCTGGACTTTTATGCATAGCAACAACTGTAACTTGTGTTGCAGCAACAAATGGA
CTAAATTGGATTTCAAGTAGTTCTAGAGCTAATGAAATCAATAAGTTTCCAACAGAAGATGTAGTTAAAAAAACAGTTGG
CTATTGTCCTAAATATGTAGATGAATTTTCAAATGGATTTAAGTTTGAATCATTTAACTTTTCAGATAGCTCATTAGAAA
ATGATAATGGTAATTCAGTTTTAAAAACTAAAGATGCAAATTTCAGCTATAAAAAAGAGGGTGCTAGAAAGGACCAAAGT
TTATTTTTTGAAGCAACACCTATTAATGAAGAATATTTTAATAAAGATTCGGAAGATAAAAAAGATATTACTGAGTACAA
TGGAATCAAGATATATTACAACAATTTCAAATATAAAGCGGTACCAGTAGATTACGTAGAATCAGAAGAAGAATCAAAGT
TAATTCAAGAGGGAACTTTGCAAATTGGATTTGGAGCTGATAAAATTAGTGAATCTAATACACAATTTGTAAAATGGTAT
GAAGATGGTATTGAATATAGCATTATGAATATGGCATATGATGATGTTGATAAAGATCAAATGATTGAAATGGCCAAAAC
AGTTATAAATAAATAA

Upstream 100 bases:

>100_bases
CGGTAAAATCAAGGCTTTATACTGCAAGAAAAAAATTAAAAGAAACCTTATCAAAGGATAAAAAGTGTGAAATATCAAAA
GCAAAGGAGTGTGAAGTTTA

Downstream 100 bases:

>100_bases
CATTAAAAGAGAGAGTAGTTTTTAGATTTAGAATGTATTATATTTTAAGAGCATTTTAAAACAAATAACTACTCTTTTTA
TTATTGCGACAACTATACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTMIVAGLLCIATTVTCVAATNG
LNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGFKFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQS
LFFEATPINEEYFNKDSEDKKDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY
EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK

Sequences:

>Translated_271_residues
MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTMIVAGLLCIATTVTCVAATNG
LNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGFKFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQS
LFFEATPINEEYFNKDSEDKKDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY
EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK
>Mature_271_residues
MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTMIVAGLLCIATTVTCVAATNG
LNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGFKFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQS
LFFEATPINEEYFNKDSEDKKDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY
EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30960; Mature: 30960

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTM
CCCCCCCCHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCEEEEEEEEEHHHHHH
IVAGLLCIATTVTCVAATNGLNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCC
KFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQSLFFEATPINEEYFNKDSEDK
EEEECCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCEEEEECCCCHHHCCCCCCCH
KDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY
HHHHHHCCEEEEEECEEEEEECHHHHCCCHHHHHHHHCCEEEECCHHHCCCCCCCEEEEE
EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK
CCCCCEEEEHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTM
CCCCCCCCHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCEEEEEEEEEHHHHHH
IVAGLLCIATTVTCVAATNGLNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCC
KFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQSLFFEATPINEEYFNKDSEDK
EEEECCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCEEEEECCCCHHHCCCCCCCH
KDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY
HHHHHHCCEEEEEECEEEEEECHHHHCCCHHHHHHHHCCEEEECCHHHCCCCCCCEEEEE
EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK
CCCCCEEEEHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA