| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187933193
Identifier: 187933193
GI number: 187933193
Start: 3744282
End: 3745097
Strand: Reverse
Name: 187933193
Synonym: CLL_A3536
Alternate gene names: NA
Gene position: 3745097-3744282 (Counterclockwise)
Preceding gene: 187932438
Following gene: 187934421
Centisome position: 98.55
GC content: 27.21
Gene sequence:
>816_bases ATGGACAGAAAATTAAATGAAAACATAGATGAAAAAATTATAGATTGTTTAAATAAAAAATCTGATGGAATTTCAGCTCC AGAAAATATGTTTTTTAAAATTAGAGCTGGAATTTTAGAGGAAGAAGATAGAGGAGTGTTATTTAATATGAAAATTAAAT TTTTAAAAGCAAAAACTATGATAGTAGCTGGACTTTTATGCATAGCAACAACTGTAACTTGTGTTGCAGCAACAAATGGA CTAAATTGGATTTCAAGTAGTTCTAGAGCTAATGAAATCAATAAGTTTCCAACAGAAGATGTAGTTAAAAAAACAGTTGG CTATTGTCCTAAATATGTAGATGAATTTTCAAATGGATTTAAGTTTGAATCATTTAACTTTTCAGATAGCTCATTAGAAA ATGATAATGGTAATTCAGTTTTAAAAACTAAAGATGCAAATTTCAGCTATAAAAAAGAGGGTGCTAGAAAGGACCAAAGT TTATTTTTTGAAGCAACACCTATTAATGAAGAATATTTTAATAAAGATTCGGAAGATAAAAAAGATATTACTGAGTACAA TGGAATCAAGATATATTACAACAATTTCAAATATAAAGCGGTACCAGTAGATTACGTAGAATCAGAAGAAGAATCAAAGT TAATTCAAGAGGGAACTTTGCAAATTGGATTTGGAGCTGATAAAATTAGTGAATCTAATACACAATTTGTAAAATGGTAT GAAGATGGTATTGAATATAGCATTATGAATATGGCATATGATGATGTTGATAAAGATCAAATGATTGAAATGGCCAAAAC AGTTATAAATAAATAA
Upstream 100 bases:
>100_bases CGGTAAAATCAAGGCTTTATACTGCAAGAAAAAAATTAAAAGAAACCTTATCAAAGGATAAAAAGTGTGAAATATCAAAA GCAAAGGAGTGTGAAGTTTA
Downstream 100 bases:
>100_bases CATTAAAAGAGAGAGTAGTTTTTAGATTTAGAATGTATTATATTTTAAGAGCATTTTAAAACAAATAACTACTCTTTTTA TTATTGCGACAACTATACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTMIVAGLLCIATTVTCVAATNG LNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGFKFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQS LFFEATPINEEYFNKDSEDKKDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK
Sequences:
>Translated_271_residues MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTMIVAGLLCIATTVTCVAATNG LNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGFKFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQS LFFEATPINEEYFNKDSEDKKDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK >Mature_271_residues MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTMIVAGLLCIATTVTCVAATNG LNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGFKFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQS LFFEATPINEEYFNKDSEDKKDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30960; Mature: 30960
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTM CCCCCCCCHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCEEEEEEEEEHHHHHH IVAGLLCIATTVTCVAATNGLNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCC KFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQSLFFEATPINEEYFNKDSEDK EEEECCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCEEEEECCCCHHHCCCCCCCH KDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY HHHHHHCCEEEEEECEEEEEECHHHHCCCHHHHHHHHCCEEEECCHHHCCCCCCCEEEEE EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK CCCCCEEEEHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDRKLNENIDEKIIDCLNKKSDGISAPENMFFKIRAGILEEEDRGVLFNMKIKFLKAKTM CCCCCCCCHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCEEEEEEEEEHHHHHH IVAGLLCIATTVTCVAATNGLNWISSSSRANEINKFPTEDVVKKTVGYCPKYVDEFSNGF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCC KFESFNFSDSSLENDNGNSVLKTKDANFSYKKEGARKDQSLFFEATPINEEYFNKDSEDK EEEECCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCEEEEECCCCHHHCCCCCCCH KDITEYNGIKIYYNNFKYKAVPVDYVESEEESKLIQEGTLQIGFGADKISESNTQFVKWY HHHHHHCCEEEEEECEEEEEECHHHHCCCHHHHHHHHCCEEEECCHHHCCCCCCCEEEEE EDGIEYSIMNMAYDDVDKDQMIEMAKTVINK CCCCCEEEEHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA