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The map label for this gene is ydiF [H]

Identifier: 187933088

GI number: 187933088

Start: 2067680

End: 2069233

Strand: Reverse

Name: ydiF [H]

Synonym: CLL_A1989

Alternate gene names: 187933088

Gene position: 2069233-2067680 (Counterclockwise)

Preceding gene: 187935437

Following gene: 187934827

Centisome position: 54.45

GC content: 32.37

Gene sequence:

>1554_bases
ATGAGTAAGGTAAAGGTTTTGACTGGAGAGGAAGCAGTAAAACTAATTAATGATGAAGATGTTTTGGCTACGGGTGGATT
TGTAGGAAGTTGTGCACCTGAGACACTTAATAAATCACTAGAAAAAAGATTTCTTGAAACAGGACATCCTAAAAACATAA
CTTTAGTTCATGCAGCAGGTCAAGGTGATGGAAAAGGAAAAGGATCAGATCACTATGCACATGAAGGAATGCTTAAAAGA
GTTATTGCTGGACATTGGAATCTTGCACCTAAACTTGGAAAATTAGCAGTTGAAAATAAAATAGAAGCATATAACTTACC
ACAAGGAACAATTTCTCAATTATTTAGAGATATCGCTGGCAAAAGAGTTGGAACAATAACTCATGTTGGATTAAATACAT
TTGTAGATCCAAGAGTTAGCGGTGGAAAATTAAATGAAAAAACAAAAGAAGATATTGTTAAAATAATAAATATAGAAGGG
AAAGAAAAACTATTATATAAATCTTTCCCTATAAATATATGCTTTTTAAGAGGATCTTTTGCAGACTCAGATGGTAATAT
TTCTTTAGAAAGAGAGATAGCAACACTTGAAGATACATCAATTGCCCAGGCTTGTAAAAACAGTGGTGGAAAGGTAATAG
TTCAAGTTGAAAAAATAGTTGAAAGTGGAACTATAGATCCACGTCTTGTAAAAATACCAGGAATATATGTAGATGCAGTG
GTTGTTTCAAAACCTGAAGAACATGAACAGTCATTTGGATGTAAGTTTAATGCAGCAGCAACAGGTGAAATAAGAGTACC
ACTGAATAGTGTAGATAAAGCTCCACTTAATGAAAGAAAAGTAATAGCTAGAAGAGCTGCAATGGAATTAAAATCAGATA
CTATTGTTAATTTAGGAATAGGTATTCCAGAAGTAATCTCATTAGTTGCTAATGAAGAAGGCATTAATGAATATATGACA
TTAACAGTAGAAGCTGGGCCAATAGGAGGTATTCCACAAGGGGGAACAGCTTTTGGAGCAAGCATAAATTCACAAGCAAT
CATAGATCAACCTTATCAATTTGATTTCTATGATGGAGGTGGAGTTGATATAGCTTTTTTAGGTCTTGCCCAAGTTGACA
AAGAAGGAAATTTAAATGTAAGTAAGTTTGGAACTCGTATAGCAGGTTGTGGTGGCTTTATAAATATAACTCAAAATGCT
AAGAAAGTATTATTCTGTGGAACATTTACAGCAGGTGGATTAAAGGTAGATGTAGGTGATGGAAAGCTCACAATTAGGCA
AGAAGGACGAGCTAAGAAGTTTATGAATAAAGTTGAACAAATAACTTTTAGTGGAGAGTATGCAAAAAAAATTAATCAGG
ACGTTACTTATATAACTGAAAGAGCTATATTTAAGTTAAAAAATGATGGATTATATCTTACAGAAATAGCACCAGGTATT
GATTTACAAAAAGATATATTAGATTTAATGGATTTTCAACCTAAAATAGATGCAAAACTTAAAATTATGGATGAAAGAAT
ATTTTATGATAAACCCATGGGATTAAACAAATAA

Upstream 100 bases:

>100_bases
AAAAAGAAAATCTTCATTTAAAGGATGTTAAAAAGGCAATTGTACTGACAGATTAATTAAAGACTACTAGGACATTAATT
AATTTTAGGGGTTGATATAA

Downstream 100 bases:

>100_bases
AACTTAGCACATTAATAGTTCATTTCGCCTAATAAATCAATTGATATTTATGTATAAAGCTTAGGAATAAAGTAAGTTAC
TATAATTATATTAAAATATA

Product: propionate CoA-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSKVKVLTGEEAVKLINDEDVLATGGFVGSCAPETLNKSLEKRFLETGHPKNITLVHAAGQGDGKGKGSDHYAHEGMLKR
VIAGHWNLAPKLGKLAVENKIEAYNLPQGTISQLFRDIAGKRVGTITHVGLNTFVDPRVSGGKLNEKTKEDIVKIINIEG
KEKLLYKSFPINICFLRGSFADSDGNISLEREIATLEDTSIAQACKNSGGKVIVQVEKIVESGTIDPRLVKIPGIYVDAV
VVSKPEEHEQSFGCKFNAAATGEIRVPLNSVDKAPLNERKVIARRAAMELKSDTIVNLGIGIPEVISLVANEEGINEYMT
LTVEAGPIGGIPQGGTAFGASINSQAIIDQPYQFDFYDGGGVDIAFLGLAQVDKEGNLNVSKFGTRIAGCGGFINITQNA
KKVLFCGTFTAGGLKVDVGDGKLTIRQEGRAKKFMNKVEQITFSGEYAKKINQDVTYITERAIFKLKNDGLYLTEIAPGI
DLQKDILDLMDFQPKIDAKLKIMDERIFYDKPMGLNK

Sequences:

>Translated_517_residues
MSKVKVLTGEEAVKLINDEDVLATGGFVGSCAPETLNKSLEKRFLETGHPKNITLVHAAGQGDGKGKGSDHYAHEGMLKR
VIAGHWNLAPKLGKLAVENKIEAYNLPQGTISQLFRDIAGKRVGTITHVGLNTFVDPRVSGGKLNEKTKEDIVKIINIEG
KEKLLYKSFPINICFLRGSFADSDGNISLEREIATLEDTSIAQACKNSGGKVIVQVEKIVESGTIDPRLVKIPGIYVDAV
VVSKPEEHEQSFGCKFNAAATGEIRVPLNSVDKAPLNERKVIARRAAMELKSDTIVNLGIGIPEVISLVANEEGINEYMT
LTVEAGPIGGIPQGGTAFGASINSQAIIDQPYQFDFYDGGGVDIAFLGLAQVDKEGNLNVSKFGTRIAGCGGFINITQNA
KKVLFCGTFTAGGLKVDVGDGKLTIRQEGRAKKFMNKVEQITFSGEYAKKINQDVTYITERAIFKLKNDGLYLTEIAPGI
DLQKDILDLMDFQPKIDAKLKIMDERIFYDKPMGLNK
>Mature_516_residues
SKVKVLTGEEAVKLINDEDVLATGGFVGSCAPETLNKSLEKRFLETGHPKNITLVHAAGQGDGKGKGSDHYAHEGMLKRV
IAGHWNLAPKLGKLAVENKIEAYNLPQGTISQLFRDIAGKRVGTITHVGLNTFVDPRVSGGKLNEKTKEDIVKIINIEGK
EKLLYKSFPINICFLRGSFADSDGNISLEREIATLEDTSIAQACKNSGGKVIVQVEKIVESGTIDPRLVKIPGIYVDAVV
VSKPEEHEQSFGCKFNAAATGEIRVPLNSVDKAPLNERKVIARRAAMELKSDTIVNLGIGIPEVISLVANEEGINEYMTL
TVEAGPIGGIPQGGTAFGASINSQAIIDQPYQFDFYDGGGVDIAFLGLAQVDKEGNLNVSKFGTRIAGCGGFINITQNAK
KVLFCGTFTAGGLKVDVGDGKLTIRQEGRAKKFMNKVEQITFSGEYAKKINQDVTYITERAIFKLKNDGLYLTEIAPGID
LQKDILDLMDFQPKIDAKLKIMDERIFYDKPMGLNK

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=510, Percent_Identity=26.2745098039216, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1787985, Length=516, Percent_Identity=47.2868217054264, Blast_Score=481, Evalue=1e-137,
Organism=Escherichia coli, GI1788552, Length=220, Percent_Identity=30.9090909090909, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788551, Length=242, Percent_Identity=24.3801652892562, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17531517, Length=421, Percent_Identity=27.790973871734, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 56062; Mature: 55931

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVKVLTGEEAVKLINDEDVLATGGFVGSCAPETLNKSLEKRFLETGHPKNITLVHAAG
CCCEEEECCCHHHEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
QGDGKGKGSDHYAHEGMLKRVIAGHWNLAPKLGKLAVENKIEAYNLPQGTISQLFRDIAG
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHC
KRVGTITHVGLNTFVDPRVSGGKLNEKTKEDIVKIINIEGKEKLLYKSFPINICFLRGSF
CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCEEEEEECCEEEEEEECCC
ADSDGNISLEREIATLEDTSIAQACKNSGGKVIVQVEKIVESGTIDPRLVKIPGIYVDAV
CCCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEEEHHHHCCCCCCEEEEECCEEEEEE
VVSKPEEHEQSFGCKFNAAATGEIRVPLNSVDKAPLNERKVIARRAAMELKSDTIVNLGI
EECCCHHHHHHCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
GIPEVISLVANEEGINEYMTLTVEAGPIGGIPQGGTAFGASINSQAIIDQPYQFDFYDGG
CHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCEEECCCEEEEEECCC
GVDIAFLGLAQVDKEGNLNVSKFGTRIAGCGGFINITQNAKKVLFCGTFTAGGLKVDVGD
CCEEEEEEEEHCCCCCCCCHHHHCCEEECCCCEEEECCCCCEEEEEEEECCCCEEEEECC
GKLTIRQEGRAKKFMNKVEQITFSGEYAKKINQDVTYITERAIFKLKNDGLYLTEIAPGI
CEEEEECCCCHHHHHHHHHHEEECCHHHHHHCCCHHHHHHEEEEEECCCCEEEEEECCCC
DLQKDILDLMDFQPKIDAKLKIMDERIFYDKPMGLNK
CHHHHHHHHHCCCCCCCCEEEEEECHHEECCCCCCCC
>Mature Secondary Structure 
SKVKVLTGEEAVKLINDEDVLATGGFVGSCAPETLNKSLEKRFLETGHPKNITLVHAAG
CCEEEECCCHHHEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
QGDGKGKGSDHYAHEGMLKRVIAGHWNLAPKLGKLAVENKIEAYNLPQGTISQLFRDIAG
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHC
KRVGTITHVGLNTFVDPRVSGGKLNEKTKEDIVKIINIEGKEKLLYKSFPINICFLRGSF
CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCCEEEEEECCEEEEEEECCC
ADSDGNISLEREIATLEDTSIAQACKNSGGKVIVQVEKIVESGTIDPRLVKIPGIYVDAV
CCCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEEEHHHHCCCCCCEEEEECCEEEEEE
VVSKPEEHEQSFGCKFNAAATGEIRVPLNSVDKAPLNERKVIARRAAMELKSDTIVNLGI
EECCCHHHHHHCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
GIPEVISLVANEEGINEYMTLTVEAGPIGGIPQGGTAFGASINSQAIIDQPYQFDFYDGG
CHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCEEECCCEEEEEECCC
GVDIAFLGLAQVDKEGNLNVSKFGTRIAGCGGFINITQNAKKVLFCGTFTAGGLKVDVGD
CCEEEEEEEEHCCCCCCCCHHHHCCEEECCCCEEEECCCCCEEEEEEEECCCCEEEEECC
GKLTIRQEGRAKKFMNKVEQITFSGEYAKKINQDVTYITERAIFKLKNDGLYLTEIAPGI
CEEEEECCCCHHHHHHHHHHEEECCHHHHHHCCCHHHHHHEEEEEECCCCEEEEEECCCC
DLQKDILDLMDFQPKIDAKLKIMDERIFYDKPMGLNK
CHHHHHHHHHCCCCCCCCEEEEEECHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]