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The map label for this gene is atpF

Identifier: 187932947

GI number: 187932947

Start: 2939247

End: 2939558

Strand: Reverse

Name: atpF

Synonym: CLL_A2862

Alternate gene names: 187932947

Gene position: 2939558-2939247 (Counterclockwise)

Preceding gene: 187932505

Following gene: 187935460

Centisome position: 77.35

GC content: 32.05

Gene sequence:

>312_bases
ATGTTTAAGAAAATAGGTGTAGTTGGTGATAAGGATTCAGTTTTAGCTTTTAAAGCTTTAGGTATCGACGTTTTCCCTGT
AGTTGGAAACGAAGAAGCAAAAAAAACTGTTGATAAATTAGCAAAGAATGATTACGCAGTTGTTTTTGTAACAGAACATG
TTGCACAAGGTATCGAAGAAACGATTGAAAGATACAATAAAGAAGTACTTCCTGCTGTAATATTAATTCCAAGCAATCAA
GGAACATTAAATATAGGTATGCAAAGAATAAGCGATAACGTAGAAAAAGCTGTAGGCGTTAATATTTTATAG

Upstream 100 bases:

>100_bases
TATGCAAAAGAAACAGAAATAAAGATTATAAGAATTGTAATGGTTGGCAAACTCAATAATATTTCTGCGGAAGTAATTAG
AGAAAGGCTGCGTGATATTT

Downstream 100 bases:

>100_bases
AAAGGTAGGTTGGTAAGGTGAAGACCGGAAAGATAATTAAGGTTTCAGGACCTTTAGTAGTTGCTGAAGGTATGGATGAA
GCTAATATATATGACGTTTG

Product: V-type ATP synthase subunit F

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit F

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MFKKIGVVGDKDSVLAFKALGIDVFPVVGNEEAKKTVDKLAKNDYAVVFVTEHVAQGIEETIERYNKEVLPAVILIPSNQ
GTLNIGMQRISDNVEKAVGVNIL

Sequences:

>Translated_103_residues
MFKKIGVVGDKDSVLAFKALGIDVFPVVGNEEAKKTVDKLAKNDYAVVFVTEHVAQGIEETIERYNKEVLPAVILIPSNQ
GTLNIGMQRISDNVEKAVGVNIL
>Mature_103_residues
MFKKIGVVGDKDSVLAFKALGIDVFPVVGNEEAKKTVDKLAKNDYAVVFVTEHVAQGIEETIERYNKEVLPAVILIPSNQ
GTLNIGMQRISDNVEKAVGVNIL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG1436

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase F subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VATF_CLOBA (B2UWY5)

Other databases:

- EMBL:   CP001078
- RefSeq:   YP_001921970.1
- ProteinModelPortal:   B2UWY5
- GeneID:   6317538
- GenomeReviews:   CP001078_GR
- KEGG:   cbt:CLH_2590
- HOGENOM:   HBG402579
- OMA:   GVIFITE
- ProtClustDB:   PRK01395
- HAMAP:   MF_00312
- InterPro:   IPR022944
- InterPro:   IPR008218

Pfam domain/function: PF01990 ATP-synt_F

EC number: 3.6.3.14

Molecular weight: Translated: 11212; Mature: 11212

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKIGVVGDKDSVLAFKALGIDVFPVVGNEEAKKTVDKLAKNDYAVVFVTEHVAQGIEE
CCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH
TIERYNKEVLPAVILIPSNQGTLNIGMQRISDNVEKAVGVNIL
HHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFKKIGVVGDKDSVLAFKALGIDVFPVVGNEEAKKTVDKLAKNDYAVVFVTEHVAQGIEE
CCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH
TIERYNKEVLPAVILIPSNQGTLNIGMQRISDNVEKAVGVNIL
HHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA