Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is 187932845

Identifier: 187932845

GI number: 187932845

Start: 223125

End: 223523

Strand: Reverse

Name: 187932845

Synonym: CLL_A0214

Alternate gene names: NA

Gene position: 223523-223125 (Counterclockwise)

Preceding gene: 187933956

Following gene: 187934222

Centisome position: 5.88

GC content: 26.32

Gene sequence:

>399_bases
ATGAAAGATATAATATTTGATGATTTTCAAAACTCTGTAAATGATTCTTTGTTAAGACATAAAAGTATCTTAGATATACT
TACTAAATATAGTGAATCTAGTTCTAGAGTTAATAGGGCAGTTGCAAAATCTGTTACAAATTGCGGATGCATAAATATTA
ATGCTTCTAAACAAAATTCATTAAATGAAGATAAATCTGTTGACGACTTATCTACCTACTTAGAATCTCACTTAAGTGGT
GAACTTTGTGAAAATTGTCGTGAAATCATAGAAAAAGAGATTGGTAATAATCTTTTTTATCTTACTTCTTTGTGCAATAA
TCTAGATATAAATTTATATGATGTTTTGCTTAAAGAGCACGACAAAATAAATACACTTGGAAAATTTGCTTTTAGATAA

Upstream 100 bases:

>100_bases
ATACATGTATTCCAAATCTTAATCCCATATTAGTAAAATAGTCTGAAAATATTTATAATTACTTAAAGTAAAATTAAATT
ATCTCAAGGAGTTGAGGCGT

Downstream 100 bases:

>100_bases
TAAAAAATCGGTTTACCTTTTGTGGTAATACCGATTTTCTACTTTTATATCTTTTTATTTAAAAGAATTTGTTCCCTTAT
TCTTTTTAACCCATCTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNSLNEDKSVDDLSTYLESHLSG
ELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEHDKINTLGKFAFR

Sequences:

>Translated_132_residues
MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNSLNEDKSVDDLSTYLESHLSG
ELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEHDKINTLGKFAFR
>Mature_132_residues
MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNSLNEDKSVDDLSTYLESHLSG
ELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEHDKINTLGKFAFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15011; Mature: 15011

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCCC
LNEDKSVDDLSTYLESHLSGELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEH
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEHHHHHHCCCCCHHHHHHHHHH
DKINTLGKFAFR
HHHHHHHHHHCC
>Mature Secondary Structure
MKDIIFDDFQNSVNDSLLRHKSILDILTKYSESSSRVNRAVAKSVTNCGCININASKQNS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCCC
LNEDKSVDDLSTYLESHLSGELCENCREIIEKEIGNNLFYLTSLCNNLDINLYDVLLKEH
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEHHHHHHCCCCCHHHHHHHHHH
DKINTLGKFAFR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA