| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is glcK [H]
Identifier: 187932724
GI number: 187932724
Start: 3577173
End: 3578126
Strand: Reverse
Name: glcK [H]
Synonym: CLL_A3397
Alternate gene names: 187932724
Gene position: 3578126-3577173 (Counterclockwise)
Preceding gene: 187935253
Following gene: 187935473
Centisome position: 94.15
GC content: 33.54
Gene sequence:
>954_bases ATGCAAAAATTTGTAGTAGGGGTTGACTTAGGAGGAACTAAGATAAGTACAGCTTTATCAAATTTAAATGGTGAAGTTAT TAGCCAAACAACAGTTCCGACTAATGCACATGAGGGAGAAATTCCAGTATTAAATAGAATAATAGACTCGGTAGATAAGG TAATAAAAGATGGTGGAGTTACTTATAAAGATATAAAAGCAATAGGTATTGGTTCTCCAGGACCACTTGATGCAGAAAAG GGAGTAATAATATACACACCTAATCTTCCATTTAAAAACTTTAATTTAGTGGATCCACTAAATAAGAAGTTTGAAGTACC TGTTTTCTTAGATAATGATGCAAACGTTGCGACTATTGGTGAGTTTATGTTTGGAGCAGGAAGAGGTGCTAAAAACGTAT TATTCTTTACAGTAAGTACAGGCGTAGGCGGTGGAGCTATATTAGATGGAAAAATATATAGAGGTCATACATCAAATGCA TTAGAAATAGGTCATATGACTGTAGCACCTGATGGTCCAAGATGTAATTGTGGAAATATTGGTTGTGTAGAAGCAACTTC ATCAGGAACAGCTATAGGTAAAAGAGGTAAAGAAGCTATAGGAAGTAAAGTTGAAACATCATTAAGAAAATATGATGATA TAACTTCATATGAAGTATTTGTAGAAGCAGCAGCTGGAGATCCAGTATGTAAAGATATAATAGATAATGCATTAAATTAT TTAGGAATAGCTGTTGCAAATGCAGTATCAATTTTTGATCCAGAAGTAATAATAATTGGTGGAGGCGTTTCAAAAGCTGG AAATATTGTATTTGATACAGTAAGAAAAGTTGTAGATAAGAGATGTTTTAAATCAATGGCTGAATCAGTTAAAATTGTAC CAGCAGGACTTGGAACAGATGCAGGTGTTGTAGGAGCAGTAGCTTTAGCATTACTTGAAACTTCAGAAAAATAA
Upstream 100 bases:
>100_bases ACATTCCTTTACACTAAATATTATAGTATAATGTAAATATATTAGAACCGTTACCGGTGAGAAAAATTAACAATTAGTAT TCAGTATGGAGGATAAATTT
Downstream 100 bases:
>100_bases TTTAAATAAGATTTTTTATAAAACCATTTAATTGTAATATATATTGCAGTTAAGTGGTTTTTATTTATGTAATAGACTAT GTTTTAGTAGAGTGTTGATA
Product: glucokinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MQKFVVGVDLGGTKISTALSNLNGEVISQTTVPTNAHEGEIPVLNRIIDSVDKVIKDGGVTYKDIKAIGIGSPGPLDAEK GVIIYTPNLPFKNFNLVDPLNKKFEVPVFLDNDANVATIGEFMFGAGRGAKNVLFFTVSTGVGGGAILDGKIYRGHTSNA LEIGHMTVAPDGPRCNCGNIGCVEATSSGTAIGKRGKEAIGSKVETSLRKYDDITSYEVFVEAAAGDPVCKDIIDNALNY LGIAVANAVSIFDPEVIIIGGGVSKAGNIVFDTVRKVVDKRCFKSMAESVKIVPAGLGTDAGVVGAVALALLETSEK
Sequences:
>Translated_317_residues MQKFVVGVDLGGTKISTALSNLNGEVISQTTVPTNAHEGEIPVLNRIIDSVDKVIKDGGVTYKDIKAIGIGSPGPLDAEK GVIIYTPNLPFKNFNLVDPLNKKFEVPVFLDNDANVATIGEFMFGAGRGAKNVLFFTVSTGVGGGAILDGKIYRGHTSNA LEIGHMTVAPDGPRCNCGNIGCVEATSSGTAIGKRGKEAIGSKVETSLRKYDDITSYEVFVEAAAGDPVCKDIIDNALNY LGIAVANAVSIFDPEVIIIGGGVSKAGNIVFDTVRKVVDKRCFKSMAESVKIVPAGLGTDAGVVGAVALALLETSEK >Mature_317_residues MQKFVVGVDLGGTKISTALSNLNGEVISQTTVPTNAHEGEIPVLNRIIDSVDKVIKDGGVTYKDIKAIGIGSPGPLDAEK GVIIYTPNLPFKNFNLVDPLNKKFEVPVFLDNDANVATIGEFMFGAGRGAKNVLFFTVSTGVGGGAILDGKIYRGHTSNA LEIGHMTVAPDGPRCNCGNIGCVEATSSGTAIGKRGKEAIGSKVETSLRKYDDITSYEVFVEAAAGDPVCKDIIDNALNY LGIAVANAVSIFDPEVIIIGGGVSKAGNIVFDTVRKVVDKRCFKSMAESVKIVPAGLGTDAGVVGAVALALLETSEK
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=281, Percent_Identity=29.1814946619217, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI298566325, Length=281, Percent_Identity=29.1814946619217, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI190014632, Length=281, Percent_Identity=29.1814946619217, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI4885285, Length=281, Percent_Identity=29.1814946619217, Blast_Score=117, Evalue=1e-26, Organism=Escherichia coli, GI1786891, Length=304, Percent_Identity=26.6447368421053, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI1787878, Length=297, Percent_Identity=28.2828282828283, Blast_Score=140, Evalue=8e-35, Organism=Escherichia coli, GI87081733, Length=321, Percent_Identity=26.791277258567, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1787363, Length=316, Percent_Identity=25.9493670886076, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1790522, Length=319, Percent_Identity=26.0188087774295, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI87082127, Length=235, Percent_Identity=22.1276595744681, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082230, Length=263, Percent_Identity=28.8973384030418, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 33004; Mature: 33004
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKFVVGVDLGGTKISTALSNLNGEVISQTTVPTNAHEGEIPVLNRIIDSVDKVIKDGGV CCEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC TYKDIKAIGIGSPGPLDAEKGVIIYTPNLPFKNFNLVDPLNKKFEVPVFLDNDANVATIG EEEHEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHH EFMFGAGRGAKNVLFFTVSTGVGGGAILDGKIYRGHTSNALEIGHMTVAPDGPRCNCGNI HHHHCCCCCCCEEEEEEEECCCCCCEEECCEEEECCCCCEEEECEEEECCCCCCCCCCCE GCVEATSSGTAIGKRGKEAIGSKVETSLRKYDDITSYEVFVEAAAGDPVCKDIIDNALNY EEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHH LGIAVANAVSIFDPEVIIIGGGVSKAGNIVFDTVRKVVDKRCFKSMAESVKIVPAGLGTD HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCC AGVVGAVALALLETSEK CHHHHHHHHHHHHCCCC >Mature Secondary Structure MQKFVVGVDLGGTKISTALSNLNGEVISQTTVPTNAHEGEIPVLNRIIDSVDKVIKDGGV CCEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC TYKDIKAIGIGSPGPLDAEKGVIIYTPNLPFKNFNLVDPLNKKFEVPVFLDNDANVATIG EEEHEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHH EFMFGAGRGAKNVLFFTVSTGVGGGAILDGKIYRGHTSNALEIGHMTVAPDGPRCNCGNI HHHHCCCCCCCEEEEEEEECCCCCCEEECCEEEECCCCCEEEECEEEECCCCCCCCCCCE GCVEATSSGTAIGKRGKEAIGSKVETSLRKYDDITSYEVFVEAAAGDPVCKDIIDNALNY EEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHH LGIAVANAVSIFDPEVIIIGGGVSKAGNIVFDTVRKVVDKRCFKSMAESVKIVPAGLGTD HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCC AGVVGAVALALLETSEK CHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]