| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932558
Identifier: 187932558
GI number: 187932558
Start: 3191642
End: 3192097
Strand: Reverse
Name: 187932558
Synonym: CLL_A3083
Alternate gene names: NA
Gene position: 3192097-3191642 (Counterclockwise)
Preceding gene: 187935640
Following gene: 187934094
Centisome position: 84.0
GC content: 28.29
Gene sequence:
>456_bases ATGAAGTTAGCAGAAGCATTAAATTTAAGAGCTGATTTGCAAAAAAGAATTCCATCGCTTAAGGAAAGGCTAATTAGAAA TGCAAAGGTTCAAGAAGGGGATGCGCCATCAGAAAATCCGATTGTGCTTTTAAAGGAACTAGATAATAATATTGTTGAAC TTGAAAAGTTAATAAAGGTAATAAATAAAACTAATAGTATAACATATGTGGAAAATGAAAGTATTGTAGATATTATTGCA AGAAGAGATGTTATAGGTTTAAAATTATCTGTTTTAAGGAGCTTTGTAAACACAGCATCTGAAAAAATAGATAGATATTC TAATAAGGAAATAAAGATATTAAGTACAGTTGACGTAGCAGAAAAGCAAGCAGAAGTAGATAATTTATCTAAAGAGTATA GATTAATAGATACTAAGCTTCAAGGATTAAATTGGACTATAGATTTAGTTGAATAA
Upstream 100 bases:
>100_bases TTAAAAGGGAATATGATTTTTAAATATTTTTTGATTAAAATAAGTAAAAATGAAAACTATAAGATAGCGATAATGAGATG TTATGAAGAGGTGATAAATT
Downstream 100 bases:
>100_bases TTTATAATTTTTAGATGGTAATTTATAAGGGCGAGCATAGGCTCTGCTAATTGAGATGTGAATTAGCTCTGATTAGCATA TACGGAACCAGTGTGCAAAT
Product: septicolysin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKLAEALNLRADLQKRIPSLKERLIRNAKVQEGDAPSENPIVLLKELDNNIVELEKLIKVINKTNSITYVENESIVDIIA RRDVIGLKLSVLRSFVNTASEKIDRYSNKEIKILSTVDVAEKQAEVDNLSKEYRLIDTKLQGLNWTIDLVE
Sequences:
>Translated_151_residues MKLAEALNLRADLQKRIPSLKERLIRNAKVQEGDAPSENPIVLLKELDNNIVELEKLIKVINKTNSITYVENESIVDIIA RRDVIGLKLSVLRSFVNTASEKIDRYSNKEIKILSTVDVAEKQAEVDNLSKEYRLIDTKLQGLNWTIDLVE >Mature_151_residues MKLAEALNLRADLQKRIPSLKERLIRNAKVQEGDAPSENPIVLLKELDNNIVELEKLIKVINKTNSITYVENESIVDIIA RRDVIGLKLSVLRSFVNTASEKIDRYSNKEIKILSTVDVAEKQAEVDNLSKEYRLIDTKLQGLNWTIDLVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17212; Mature: 17212
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAEALNLRADLQKRIPSLKERLIRNAKVQEGDAPSENPIVLLKELDNNIVELEKLIKV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHH INKTNSITYVENESIVDIIARRDVIGLKLSVLRSFVNTASEKIDRYSNKEIKILSTVDVA HCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH EKQAEVDNLSKEYRLIDTKLQGLNWTIDLVE HHHHHHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MKLAEALNLRADLQKRIPSLKERLIRNAKVQEGDAPSENPIVLLKELDNNIVELEKLIKV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHH INKTNSITYVENESIVDIIARRDVIGLKLSVLRSFVNTASEKIDRYSNKEIKILSTVDVA HCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH EKQAEVDNLSKEYRLIDTKLQGLNWTIDLVE HHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA