Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is epsJ [H]

Identifier: 187932491

GI number: 187932491

Start: 3310565

End: 3311548

Strand: Reverse

Name: epsJ [H]

Synonym: CLL_A3187

Alternate gene names: 187932491

Gene position: 3311548-3310565 (Counterclockwise)

Preceding gene: 187932495

Following gene: 187933244

Centisome position: 87.14

GC content: 24.19

Gene sequence:

>984_bases
TTGTTTAAAGTATCTATAATTACTCCTGTTTATAATGTAGAAGAGTGTATTGAAAAAAGTATAAAATCTGTTATAAATCA
AACTTGTAAGGAGTTTGAATTTTTGCTTATAGATGATGGATCAAAAGATAGAAGTATTGAAATAGCAAAATCATTATTAG
AGAATTCAGATATAAACTTTAAGATTATAACTCAAGAAAATGCAGGAGTCAGTTGTGCTAGAAATAGGGGAATAAATATA
GCTAGTGGAGAGTATATAACATTTTTAGATAGTGATGATTATATTGATTCTAGATTTGTTGAACTTATGTATGACAAAGC
AAAGAAAACTGAATGTGATGTTGTATTTTGTGACTATAGTGAAGTTGATAACAACGGGAATGTATTAGTTAAGAATAGAA
CTAATTACTTAAATGATTTTATATCAGGAAAAGAAGCAGCACTTTTACAGCTAAAGGATGAAATAACTATAGGTATGAGA
AGTGCTATATATAAAAATTCTGTTATTCAAAATAATAATTTATTATTTGACACTAACAGAAAATATGGAGAAGATATGGT
TTTTGTTGTAAAGGCATTACTATATTCAAATAAAGTTATAAGTGTGAATGAAATATTAGCTTTTTATGTAATATGGGGAA
ATTCTGTAACACAAAATGTATCTTTAAAGCATCTTGATTGCTATTATTCATATATAGATTTATTAAATTATGTAAAGAAA
GATAGTAATTTAAAAGAAATAGAAAATTTCTTATCAGAATTTAAAATACAATACTCTATATCACATGTTTTTTCTATTTT
AGGTAAAGATCCTAATTTTCATAAGGATTTATTTAAATTCTTAAGTCAAGAGGATGTTAAGTTATACCTAAAAAATTATA
AAATTCAAAAGTTTGATAAAAATAATATAAGATACTTAATTCAATGTAGTGGCATGAGATTTTGTCCAAAGTTACTAATA
AATGCGTTAAATAAAATGAGGTAA

Upstream 100 bases:

>100_bases
AAGAATATTTAAAATGTAATAAAAAAGTAAGAATTTTATTAGAAAAGATTCAAAAAAGTCATGTGGAATCTATTATAATA
AATAAAGGGAGAGAATAATT

Downstream 100 bases:

>100_bases
TTAAAATAGAGTCTTACTTGCTATAAAGTTTAGCAGGAATCTCTCCAGGTAGGAGGAAACTATAATGAGAAATTGGAAGA
CATTAATAATTATGATAATC

Product: glycosyltransferase, GT2 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MFKVSIITPVYNVEECIEKSIKSVINQTCKEFEFLLIDDGSKDRSIEIAKSLLENSDINFKIITQENAGVSCARNRGINI
ASGEYITFLDSDDYIDSRFVELMYDKAKKTECDVVFCDYSEVDNNGNVLVKNRTNYLNDFISGKEAALLQLKDEITIGMR
SAIYKNSVIQNNNLLFDTNRKYGEDMVFVVKALLYSNKVISVNEILAFYVIWGNSVTQNVSLKHLDCYYSYIDLLNYVKK
DSNLKEIENFLSEFKIQYSISHVFSILGKDPNFHKDLFKFLSQEDVKLYLKNYKIQKFDKNNIRYLIQCSGMRFCPKLLI
NALNKMR

Sequences:

>Translated_327_residues
MFKVSIITPVYNVEECIEKSIKSVINQTCKEFEFLLIDDGSKDRSIEIAKSLLENSDINFKIITQENAGVSCARNRGINI
ASGEYITFLDSDDYIDSRFVELMYDKAKKTECDVVFCDYSEVDNNGNVLVKNRTNYLNDFISGKEAALLQLKDEITIGMR
SAIYKNSVIQNNNLLFDTNRKYGEDMVFVVKALLYSNKVISVNEILAFYVIWGNSVTQNVSLKHLDCYYSYIDLLNYVKK
DSNLKEIENFLSEFKIQYSISHVFSILGKDPNFHKDLFKFLSQEDVKLYLKNYKIQKFDKNNIRYLIQCSGMRFCPKLLI
NALNKMR
>Mature_327_residues
MFKVSIITPVYNVEECIEKSIKSVINQTCKEFEFLLIDDGSKDRSIEIAKSLLENSDINFKIITQENAGVSCARNRGINI
ASGEYITFLDSDDYIDSRFVELMYDKAKKTECDVVFCDYSEVDNNGNVLVKNRTNYLNDFISGKEAALLQLKDEITIGMR
SAIYKNSVIQNNNLLFDTNRKYGEDMVFVVKALLYSNKVISVNEILAFYVIWGNSVTQNVSLKHLDCYYSYIDLLNYVKK
DSNLKEIENFLSEFKIQYSISHVFSILGKDPNFHKDLFKFLSQEDVKLYLKNYKIQKFDKNNIRYLIQCSGMRFCPKLLI
NALNKMR

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=202, Percent_Identity=29.7029702970297, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37916; Mature: 37916

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVSIITPVYNVEECIEKSIKSVINQTCKEFEFLLIDDGSKDRSIEIAKSLLENSDINF
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCCCCCE
KIITQENAGVSCARNRGINIASGEYITFLDSDDYIDSRFVELMYDKAKKTECDVVFCDYS
EEEEECCCCCCHHHCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHH
EVDNNGNVLVKNRTNYLNDFISGKEAALLQLKDEITIGMRSAIYKNSVIQNNNLLFDTNR
HCCCCCCEEEECCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCEEECCCEEEECCC
KYGEDMVFVVKALLYSNKVISVNEILAFYVIWGNSVTQNVSLKHLDCYYSYIDLLNYVKK
CCCCHHHHHHHHHHHCCCCEEHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC
DSNLKEIENFLSEFKIQYSISHVFSILGKDPNFHKDLFKFLSQEDVKLYLKNYKIQKFDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCEEEEECC
NNIRYLIQCSGMRFCPKLLINALNKMR
CCCEEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKVSIITPVYNVEECIEKSIKSVINQTCKEFEFLLIDDGSKDRSIEIAKSLLENSDINF
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCCCCCE
KIITQENAGVSCARNRGINIASGEYITFLDSDDYIDSRFVELMYDKAKKTECDVVFCDYS
EEEEECCCCCCHHHCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHH
EVDNNGNVLVKNRTNYLNDFISGKEAALLQLKDEITIGMRSAIYKNSVIQNNNLLFDTNR
HCCCCCCEEEECCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCEEECCCEEEECCC
KYGEDMVFVVKALLYSNKVISVNEILAFYVIWGNSVTQNVSLKHLDCYYSYIDLLNYVKK
CCCCHHHHHHHHHHHCCCCEEHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC
DSNLKEIENFLSEFKIQYSISHVFSILGKDPNFHKDLFKFLSQEDVKLYLKNYKIQKFDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCEEEEECC
NNIRYLIQCSGMRFCPKLLINALNKMR
CCCEEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]