| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is cls [H]
Identifier: 187932465
GI number: 187932465
Start: 3258232
End: 3259665
Strand: Reverse
Name: cls [H]
Synonym: CLL_A3147
Alternate gene names: 187932465
Gene position: 3259665-3258232 (Counterclockwise)
Preceding gene: 187932981
Following gene: 187934416
Centisome position: 85.77
GC content: 27.2
Gene sequence:
>1434_bases ATGAATATATTATTAGGAATAGGTATGTTAGTTTTAATATTAAATATATTCTTTTCATTATCATTAATATTTATAGAAAG AAAAGATCCAACAACAACATGGGCATGGCTTTTAATATTAATTATTTTACCGGGATTTGGTTTTGTATTATATCTTCTAT TTGGACAAAACTTAAGTAGGCAAAAGATTTTTAAAGAAAAAACACAAATTGATGAAATAAAGAGAAGAAATTTAAGTAGT AGATATGGTAATAGGAGTAATTGTCATGATGGAGGAGATAAATTTTTTGATTTAAGAAAAATGAATTATAATCATTCGGG TTCTCAATATACAACTAACAATGATCTTGATGTGTATGTTAATGGAGAAGATAAGTTTAGACAATTAATTGAAGATATAA AGAATGCAAAGGAATATATACATATAGAATATTATATTTTTCGTAATGATTGTTTAGGAAAAGAAATAATAGCAGAATTA ACAAAAAAGGCAGCAAGTGGAGTTGAAGTAAGACTTTTAGCAGACAGTATGGGTTCTTATACATTAACCAAAGGTGCATT AAAGAATTATTTAAAATCAGGAGGAAAATTTGCAATATTTTTCCCAGGAATATTACCACACATAAATACACGTATAAATT ATAGAAATCATAGAAAAATAGTAGTAATAGATGGAGAATATGGGTATGTTGGTGGATTTAATGTTGGTAAGGAATATATA AATAGAGATCCTAAGGTTGGATTTTGGAGAGATACTCACGTTAGAATAAGAGGCGGGGCAGTAAATGATTTAAATGAAAG ATTCTTATTAGATTGGTGTTATGCATCAGAAGAGGTAATAAGTGATTATAATAAATATTTATCAGATAAAAATGAAGAAG TGGGCGATGTTGGTATACAAATAGTTACTAGTGGACCTGATCATGAAGAAGAATATATTAGAAATGCTTATATTAAACTT ATAAACAATGCTAAAAATAATTTATATTTAGAAACGCCTTATTTAGTACCAGATTTACCTATATTAGAAGCTTTAAAAAT ATCAGCATTATCAGGTGTTGACGTTAGAATAATAATTCCAGGAAATCCAGATCACTTTTTTATGCAATGGGCAGCTAGTT CTTATATAGGTGAACTTTTAAATGCTGGAATAAAAATATATTATTATAAAAATGGATTTATCCATGCTAAGGCTATGGTT GCAGATAGCACTGTAGTATCTATAGGAACAGCTAACATGGATATAAGAAGTTTCAAATTAAATTTTGAAGTTAATGCTTT TATATTTGATGATAGAGTAGCTATTGATTATGAGAAACAATTCATGGAAGATATTGAATTTTCTGAAGAAATAACAATAG AATCGCATGCTAATAGAAGTACGTCTATTAAGATAAAAGAATCTTTAGCAAGATTAGTTTCACCAATACTTTAA
Upstream 100 bases:
>100_bases AACATGATAAAATATTAAATATAGCATATAAATTGAATGAAGAATTATAATAGAATGATTTAATTTTAAATAATAACCTA AACGAAGGAAGTGAGAAAAT
Downstream 100 bases:
>100_bases TAATTATAAATTATGGATTATGTATAAAAATTATTTTTTACTTTAACTTGGAATAAATCCTTAAATAAAATAATAAGATG TGAAAAGAGGAATGAATCAT
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MNILLGIGMLVLILNIFFSLSLIFIERKDPTTTWAWLLILIILPGFGFVLYLLFGQNLSRQKIFKEKTQIDEIKRRNLSS RYGNRSNCHDGGDKFFDLRKMNYNHSGSQYTTNNDLDVYVNGEDKFRQLIEDIKNAKEYIHIEYYIFRNDCLGKEIIAEL TKKAASGVEVRLLADSMGSYTLTKGALKNYLKSGGKFAIFFPGILPHINTRINYRNHRKIVVIDGEYGYVGGFNVGKEYI NRDPKVGFWRDTHVRIRGGAVNDLNERFLLDWCYASEEVISDYNKYLSDKNEEVGDVGIQIVTSGPDHEEEYIRNAYIKL INNAKNNLYLETPYLVPDLPILEALKISALSGVDVRIIIPGNPDHFFMQWAASSYIGELLNAGIKIYYYKNGFIHAKAMV ADSTVVSIGTANMDIRSFKLNFEVNAFIFDDRVAIDYEKQFMEDIEFSEEITIESHANRSTSIKIKESLARLVSPIL
Sequences:
>Translated_477_residues MNILLGIGMLVLILNIFFSLSLIFIERKDPTTTWAWLLILIILPGFGFVLYLLFGQNLSRQKIFKEKTQIDEIKRRNLSS RYGNRSNCHDGGDKFFDLRKMNYNHSGSQYTTNNDLDVYVNGEDKFRQLIEDIKNAKEYIHIEYYIFRNDCLGKEIIAEL TKKAASGVEVRLLADSMGSYTLTKGALKNYLKSGGKFAIFFPGILPHINTRINYRNHRKIVVIDGEYGYVGGFNVGKEYI NRDPKVGFWRDTHVRIRGGAVNDLNERFLLDWCYASEEVISDYNKYLSDKNEEVGDVGIQIVTSGPDHEEEYIRNAYIKL INNAKNNLYLETPYLVPDLPILEALKISALSGVDVRIIIPGNPDHFFMQWAASSYIGELLNAGIKIYYYKNGFIHAKAMV ADSTVVSIGTANMDIRSFKLNFEVNAFIFDDRVAIDYEKQFMEDIEFSEEITIESHANRSTSIKIKESLARLVSPIL >Mature_477_residues MNILLGIGMLVLILNIFFSLSLIFIERKDPTTTWAWLLILIILPGFGFVLYLLFGQNLSRQKIFKEKTQIDEIKRRNLSS RYGNRSNCHDGGDKFFDLRKMNYNHSGSQYTTNNDLDVYVNGEDKFRQLIEDIKNAKEYIHIEYYIFRNDCLGKEIIAEL TKKAASGVEVRLLADSMGSYTLTKGALKNYLKSGGKFAIFFPGILPHINTRINYRNHRKIVVIDGEYGYVGGFNVGKEYI NRDPKVGFWRDTHVRIRGGAVNDLNERFLLDWCYASEEVISDYNKYLSDKNEEVGDVGIQIVTSGPDHEEEYIRNAYIKL INNAKNNLYLETPYLVPDLPILEALKISALSGVDVRIIIPGNPDHFFMQWAASSYIGELLNAGIKIYYYKNGFIHAKAMV ADSTVVSIGTANMDIRSFKLNFEVNAFIFDDRVAIDYEKQFMEDIEFSEEITIESHANRSTSIKIKESLARLVSPIL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=463, Percent_Identity=26.7818574514039, Blast_Score=184, Evalue=8e-48, Organism=Escherichia coli, GI1787007, Length=323, Percent_Identity=26.9349845201238, Blast_Score=124, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 54638; Mature: 54638
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILLGIGMLVLILNIFFSLSLIFIERKDPTTTWAWLLILIILPGFGFVLYLLFGQNLSR CCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QKIFKEKTQIDEIKRRNLSSRYGNRSNCHDGGDKFFDLRKMNYNHSGSQYTTNNDLDVYV HHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEEE NGEDKFRQLIEDIKNAKEYIHIEYYIFRNDCLGKEIIAELTKKAASGVEVRLLADSMGSY CCHHHHHHHHHHHHCCHHEEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCE TLTKGALKNYLKSGGKFAIFFPGILPHINTRINYRNHRKIVVIDGEYGYVGGFNVGKEYI EECHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCEECCCHHHHHHH NRDPKVGFWRDTHVRIRGGAVNDLNERFLLDWCYASEEVISDYNKYLSDKNEEVGDVGIQ CCCCCCCEEECCEEEEECCCCCCCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCEE IVTSGPDHEEEYIRNAYIKLINNAKNNLYLETPYLVPDLPILEALKISALSGVDVRIIIP EEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEC GNPDHFFMQWAASSYIGELLNAGIKIYYYKNGFIHAKAMVADSTVVSIGTANMDIRSFKL CCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEEEEEEECCEEEEEECCCCEEEEEEE NFEVNAFIFDDRVAIDYEKQFMEDIEFSEEITIESHANRSTSIKIKESLARLVSPIL EEEEEEEEEECEEEECHHHHHHHHCCCCCEEEEECCCCCCCEEEHHHHHHHHHHCCC >Mature Secondary Structure MNILLGIGMLVLILNIFFSLSLIFIERKDPTTTWAWLLILIILPGFGFVLYLLFGQNLSR CCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QKIFKEKTQIDEIKRRNLSSRYGNRSNCHDGGDKFFDLRKMNYNHSGSQYTTNNDLDVYV HHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEEE NGEDKFRQLIEDIKNAKEYIHIEYYIFRNDCLGKEIIAELTKKAASGVEVRLLADSMGSY CCHHHHHHHHHHHHCCHHEEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCE TLTKGALKNYLKSGGKFAIFFPGILPHINTRINYRNHRKIVVIDGEYGYVGGFNVGKEYI EECHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCEECCCHHHHHHH NRDPKVGFWRDTHVRIRGGAVNDLNERFLLDWCYASEEVISDYNKYLSDKNEEVGDVGIQ CCCCCCCEEECCEEEEECCCCCCCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCEE IVTSGPDHEEEYIRNAYIKLINNAKNNLYLETPYLVPDLPILEALKISALSGVDVRIIIP EEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEC GNPDHFFMQWAASSYIGELLNAGIKIYYYKNGFIHAKAMVADSTVVSIGTANMDIRSFKL CCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEEEEEEECCEEEEEECCCCEEEEEEE NFEVNAFIFDDRVAIDYEKQFMEDIEFSEEITIESHANRSTSIKIKESLARLVSPIL EEEEEEEEEECEEEECHHHHHHHHCCCCCEEEEECCCCCCCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10585141 [H]