| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is nuoG [C]
Identifier: 187932399
GI number: 187932399
Start: 2376897
End: 2378594
Strand: Reverse
Name: nuoG [C]
Synonym: CLL_A2307
Alternate gene names: 187932399
Gene position: 2378594-2376897 (Counterclockwise)
Preceding gene: 187932967
Following gene: 187935499
Centisome position: 62.59
GC content: 33.16
Gene sequence:
>1698_bases ATGTCAAAATATATGATAATTGATGGTAACAGGGTAGAATTTGATAATGAAAAAAATATTTTAGATTTAGTAAGGAAAGC AGGAATTGACTTACCTACATTTTGTTATTATTCTGATCTATCTATTTATGGAGCGTGTAGAATGTGTGTGGTTGAAGATG AATGGGGAGGAATTATAGCTTCTTGCTCTACACCACCTAAGGATAAAATGTCAATTAAGACTAATACGCCTAAGCTTCAT AAGCACCGTAAGATGATATTAGAACTTTTATTAGCATCACATTGTAGAGATTGCACTGTGTGTGAAAAGAGTGGGAAATG TAGACTTCAAGAATTAGCTTTACGCTTTGGAGTGAAGACTATTAGATTTAAAAATGAAAATGAAAAAATTGAATTAGATA CTTCATCTAAATCAATAGTTCGTGATCCAAGCAAGTGTATATTGTGTGGAGATTGCGTTAGAATGTGTAATGAAATACAA AATGTTGGAGCTATTGATTTCGCATATCGTGGTTCTAATATGGTTGTTAGTCCAGCCTTTGGTAAATGTTTAGGAGAAAC AGATTGTGTAAATTGTGGACAATGTGCAAATGTATGTCCAACGGGAGCCATTGTTGTAAAAAGCGATGTAAAGCCAGTTT GGAAAGCGATATATAATCCTAAACAAAGAGTTGTAGCTCAAGTTGCACCTGCAGTAAGAGTTGCGTTAGGTGAAGAATTT GGAATAAAACCTGGTGAAAACGTTATGGATAAAATAGTTGCTGCAATGAGAAAATTAGGATTTGATGAAATATATGATAC TTCATTAACTGCTGATATGACAATAATAGAAGAATCTAATGAGTTTTTACAAAAGTTAGAATCGGGAGATGATAAACTTC CTTTATTTACATCTTGCTGTCCAGCTTGGGTAAGATATGTGGAAACAAAACATCCAGAACTTATGAAATATGTTTCTACA TGCAAGTCACCAATGCAAATGTTTGGATCAGTAATAAAAGAATATTTTAAAGAAAACGATTCTTTAGAAGAAAAAGAAAC TATATCAGTAGCTATTATGCCATGTACTGCTAAGAAAGCAGAGGCAGCTAGAGAAGAATTTATAACAAATGGAATTAAAG ATATTGATTATGTAATTACAACAACAGAATTGTGTAAGATGATTAATGAAGCGGGACTTCAATTTGATAAGATTGAACCA GAATCTTCAGATATGCCATTTTCTTTATATTCAGGAGCAGGAGTTATATTTGGAGTTACAGGTGGTGTAACTGAAGCAGT AATACGTGGAGTAGTTGAAGATAAGAGTTCAAAGGCTTTAAAAGAAATAGAATTTATTGGCGTTCGTGGAATGGATGGGG TAAAAATTTGTGAAGTTCCATTTGGAGAAAAGAATCTACGTATAGGGGTAGTTAGTGGACTTGCTAATGCAGAAAACTTA ATTGATAAGATACAAAGTGGAGAAGAACATTTTGATTTTGTTGAAGTCATGGCTTGCCCAGGAGGCTGTGTAGCAGGAGC AGGACAACCTTTTAGTTTAAAAGAAGGAAATAAAGAAAGGGCTAAGGGTCTTTATAAGGTAGATAAGGTTACGCAAATAA AGAGAAGTCAAGAAAATCCAGTATTAATATCTTTATATAATGGATTATTAAAAGAACGTTCTAAGGAATTATTACATGTT CATTATGAGCATGAGTAG
Upstream 100 bases:
>100_bases TATAAAATGTGGTGCTTGTATGGATGGATGTGCATTTAAAGCAATCCAGTTGGTTTAATAGCTCACAACGTATGAATTAG TGAAAGGAAGGTATAAAGTT
Downstream 100 bases:
>100_bases AAAGATAAGTAATCATATGGCCTCACCATTATTCCTATACCGCGTTTGGAAGGGGCGCATGGCTAAAAAATCGACAACTC TAAAGTCGCCTTAGAGATTT
Product: iron hydrogenase 1
Products: NA
Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MSKYMIIDGNRVEFDNEKNILDLVRKAGIDLPTFCYYSDLSIYGACRMCVVEDEWGGIIASCSTPPKDKMSIKTNTPKLH KHRKMILELLLASHCRDCTVCEKSGKCRLQELALRFGVKTIRFKNENEKIELDTSSKSIVRDPSKCILCGDCVRMCNEIQ NVGAIDFAYRGSNMVVSPAFGKCLGETDCVNCGQCANVCPTGAIVVKSDVKPVWKAIYNPKQRVVAQVAPAVRVALGEEF GIKPGENVMDKIVAAMRKLGFDEIYDTSLTADMTIIEESNEFLQKLESGDDKLPLFTSCCPAWVRYVETKHPELMKYVST CKSPMQMFGSVIKEYFKENDSLEEKETISVAIMPCTAKKAEAAREEFITNGIKDIDYVITTTELCKMINEAGLQFDKIEP ESSDMPFSLYSGAGVIFGVTGGVTEAVIRGVVEDKSSKALKEIEFIGVRGMDGVKICEVPFGEKNLRIGVVSGLANAENL IDKIQSGEEHFDFVEVMACPGGCVAGAGQPFSLKEGNKERAKGLYKVDKVTQIKRSQENPVLISLYNGLLKERSKELLHV HYEHE
Sequences:
>Translated_565_residues MSKYMIIDGNRVEFDNEKNILDLVRKAGIDLPTFCYYSDLSIYGACRMCVVEDEWGGIIASCSTPPKDKMSIKTNTPKLH KHRKMILELLLASHCRDCTVCEKSGKCRLQELALRFGVKTIRFKNENEKIELDTSSKSIVRDPSKCILCGDCVRMCNEIQ NVGAIDFAYRGSNMVVSPAFGKCLGETDCVNCGQCANVCPTGAIVVKSDVKPVWKAIYNPKQRVVAQVAPAVRVALGEEF GIKPGENVMDKIVAAMRKLGFDEIYDTSLTADMTIIEESNEFLQKLESGDDKLPLFTSCCPAWVRYVETKHPELMKYVST CKSPMQMFGSVIKEYFKENDSLEEKETISVAIMPCTAKKAEAAREEFITNGIKDIDYVITTTELCKMINEAGLQFDKIEP ESSDMPFSLYSGAGVIFGVTGGVTEAVIRGVVEDKSSKALKEIEFIGVRGMDGVKICEVPFGEKNLRIGVVSGLANAENL IDKIQSGEEHFDFVEVMACPGGCVAGAGQPFSLKEGNKERAKGLYKVDKVTQIKRSQENPVLISLYNGLLKERSKELLHV HYEHE >Mature_564_residues SKYMIIDGNRVEFDNEKNILDLVRKAGIDLPTFCYYSDLSIYGACRMCVVEDEWGGIIASCSTPPKDKMSIKTNTPKLHK HRKMILELLLASHCRDCTVCEKSGKCRLQELALRFGVKTIRFKNENEKIELDTSSKSIVRDPSKCILCGDCVRMCNEIQN VGAIDFAYRGSNMVVSPAFGKCLGETDCVNCGQCANVCPTGAIVVKSDVKPVWKAIYNPKQRVVAQVAPAVRVALGEEFG IKPGENVMDKIVAAMRKLGFDEIYDTSLTADMTIIEESNEFLQKLESGDDKLPLFTSCCPAWVRYVETKHPELMKYVSTC KSPMQMFGSVIKEYFKENDSLEEKETISVAIMPCTAKKAEAAREEFITNGIKDIDYVITTTELCKMINEAGLQFDKIEPE SSDMPFSLYSGAGVIFGVTGGVTEAVIRGVVEDKSSKALKEIEFIGVRGMDGVKICEVPFGEKNLRIGVVSGLANAENLI DKIQSGEEHFDFVEVMACPGGCVAGAGQPFSLKEGNKERAKGLYKVDKVTQIKRSQENPVLISLYNGLLKERSKELLHVH YEHE
Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat
COG id: COG4624
COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI11968051, Length=398, Percent_Identity=28.391959798995, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI6912524, Length=407, Percent_Identity=25.0614250614251, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI134284357, Length=348, Percent_Identity=27.0114942528736, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI84452151, Length=350, Percent_Identity=26.8571428571429, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI14165461, Length=448, Percent_Identity=24.7767857142857, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI33519475, Length=277, Percent_Identity=28.5198555956679, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI145693161, Length=245, Percent_Identity=26.9387755102041, Blast_Score=102, Evalue=8e-23, Organism=Caenorhabditis elegans, GI71995015, Length=386, Percent_Identity=31.0880829015544, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17565758, Length=207, Percent_Identity=31.8840579710145, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI32566231, Length=207, Percent_Identity=31.8840579710145, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI193209088, Length=207, Percent_Identity=31.8840579710145, Blast_Score=111, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6324089, Length=414, Percent_Identity=24.6376811594203, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI116007470, Length=350, Percent_Identity=28, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI116007466, Length=350, Percent_Identity=28, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI116007464, Length=350, Percent_Identity=28, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI116007468, Length=350, Percent_Identity=28, Blast_Score=149, Evalue=7e-36, Organism=Drosophila melanogaster, GI116007462, Length=285, Percent_Identity=29.4736842105263, Blast_Score=132, Evalue=8e-31, Organism=Drosophila melanogaster, GI24640559, Length=197, Percent_Identity=32.994923857868, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24640557, Length=197, Percent_Identity=32.994923857868, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012675 - InterPro: IPR009016 - InterPro: IPR004108 - InterPro: IPR003149 - InterPro: IPR013352 - InterPro: IPR001041 [H]
Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]
EC number: =1.12.7.2 [H]
Molecular weight: Translated: 62647; Mature: 62516
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00641 COMPLEX1_75K_1 ; PS51085 2FE2S_FER_2 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYMIIDGNRVEFDNEKNILDLVRKAGIDLPTFCYYSDLSIYGACRMCVVEDEWGGIIA CCCEEEEECCEEEECCCCCHHHHHHHCCCCCCCCCEECCCHHCCEEEEEEEECCCCCEEE SCSTPPKDKMSIKTNTPKLHKHRKMILELLLASHCRDCTVCEKSGKCRLQELALRFGVKT ECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCEE IRFKNENEKIELDTSSKSIVRDPSKCILCGDCVRMCNEIQNVGAIDFAYRGSNMVVSPAF EEEECCCCEEEEECCCCHHHCCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCCEEECCHH GKCLGETDCVNCGQCANVCPTGAIVVKSDVKPVWKAIYNPKQRVVAQVAPAVRVALGEEF HHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHC GIKPGENVMDKIVAAMRKLGFDEIYDTSLTADMTIIEESNEFLQKLESGDDKLPLFTSCC CCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHHHHH PAWVRYVETKHPELMKYVSTCKSPMQMFGSVIKEYFKENDSLEEKETISVAIMPCTAKKA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHH EAAREEFITNGIKDIDYVITTTELCKMINEAGLQFDKIEPESSDMPFSLYSGAGVIFGVT HHHHHHHHHCCCCHHHHEEEHHHHHHHHHHHCCEEECCCCCCCCCCEEEECCCEEEEEEC GGVTEAVIRGVVEDKSSKALKEIEFIGVRGMDGVKICEVPFGEKNLRIGVVSGLANAENL CCHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCCEEEECCCCCCCEEEEEECCCCHHHHH IDKIQSGEEHFDFVEVMACPGGCVAGAGQPFSLKEGNKERAKGLYKVDKVTQIKRSQENP HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCC VLISLYNGLLKERSKELLHVHYEHE EEEHHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure SKYMIIDGNRVEFDNEKNILDLVRKAGIDLPTFCYYSDLSIYGACRMCVVEDEWGGIIA CCEEEEECCEEEECCCCCHHHHHHHCCCCCCCCCEECCCHHCCEEEEEEEECCCCCEEE SCSTPPKDKMSIKTNTPKLHKHRKMILELLLASHCRDCTVCEKSGKCRLQELALRFGVKT ECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCEE IRFKNENEKIELDTSSKSIVRDPSKCILCGDCVRMCNEIQNVGAIDFAYRGSNMVVSPAF EEEECCCCEEEEECCCCHHHCCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCCEEECCHH GKCLGETDCVNCGQCANVCPTGAIVVKSDVKPVWKAIYNPKQRVVAQVAPAVRVALGEEF HHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHC GIKPGENVMDKIVAAMRKLGFDEIYDTSLTADMTIIEESNEFLQKLESGDDKLPLFTSCC CCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHHHHH PAWVRYVETKHPELMKYVSTCKSPMQMFGSVIKEYFKENDSLEEKETISVAIMPCTAKKA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHH EAAREEFITNGIKDIDYVITTTELCKMINEAGLQFDKIEPESSDMPFSLYSGAGVIFGVT HHHHHHHHHCCCCHHHHEEEHHHHHHHHHHHCCEEECCCCCCCCCCEEEECCCEEEEEEC GGVTEAVIRGVVEDKSSKALKEIEFIGVRGMDGVKICEVPFGEKNLRIGVVSGLANAENL CCHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCCEEEECCCCCCCEEEEEECCCCHHHHH IDKIQSGEEHFDFVEVMACPGGCVAGAGQPFSLKEGNKERAKGLYKVDKVTQIKRSQENP HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCC VLISLYNGLLKERSKELLHVHYEHE EEEHHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1911757; 9836629; 10529166 [H]