Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is spoIIM [H]

Identifier: 187932329

GI number: 187932329

Start: 2460777

End: 2461409

Strand: Reverse

Name: spoIIM [H]

Synonym: CLL_A2369

Alternate gene names: 187932329

Gene position: 2461409-2460777 (Counterclockwise)

Preceding gene: 187935332

Following gene: 187933384

Centisome position: 64.77

GC content: 25.59

Gene sequence:

>633_bases
GTGGTGAATTATATGGTGAATAAGCTTGGTCAAACCTTTAAAGATAAAAAAGTATATTTCTTCATGGTATTAATAATGTT
TTGCATTGGAATATCTTTTGGACTTTATGTAGTAAAGTACATGAGCGAATCTAACAGAAATGATTTGTTAAGTTATTTTT
CAAGTTTTACATCTTCGATAGGGGACACGCCTATTAATTATGAAAATTTGTTAATTAATGTTATAAAAAAGAATATGTTG
TTAATTATACCTATATTCATGTTTGGTTTTACTTTTTTTGGAATGCCGTTCATATTAGTTTTAGATATGTTTAAAGGGTT
TACGTTAGGATATACGTTTTCGTTTATACTAACAACTTTTCAGGGCAAAGGTATTGGATTAGCATTAGTATCTGTAATTC
CTCAAAATTTAATTTATATTCCTTGTTTTATAGCATTAAGTGTTATAGCATTAGCTATGTCAACTCAAAAATTTAAAAGT
AAGTTTTTTAAAAGAGCAAATTTGAATGATCCATTTTTTAATTCTTTAGGAAATAAGTTGATTGTAATTTTAGGATTCTT
TGTATTTGCAGCAATTATAGAAACTTATGTGTCACCTAATTTTATAAAATTTGTGGTTACTAAATTTTATTAG

Upstream 100 bases:

>100_bases
GAAATTTTAATATTTTAATTAACATATATTTTCTTAAGTACTAAGAATAATATGGAAATATTAAACATAGTATAAAGTAG
AGTAACTCAAGGAGGAATAA

Downstream 100 bases:

>100_bases
TTTTATAATTAAAAAACATATATAGAAAATTATAAACTTAAGATATAAGTTTTAATTAAAAAGGAAAAATGATAATTTTG
TCGAATATTAATTCATAATC

Product: stage II sporulation protein M

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSIGDTPINYENLLINVIKKNML
LIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTFQGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKS
KFFKRANLNDPFFNSLGNKLIVILGFFVFAAIIETYVSPNFIKFVVTKFY

Sequences:

>Translated_210_residues
MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSIGDTPINYENLLINVIKKNML
LIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTFQGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKS
KFFKRANLNDPFFNSLGNKLIVILGFFVFAAIIETYVSPNFIKFVVTKFY
>Mature_210_residues
MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSIGDTPINYENLLINVIKKNML
LIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTFQGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKS
KFFKRANLNDPFFNSLGNKLIVILGFFVFAAIIETYVSPNFIKFVVTKFY

Specific function: Required for complete septum migration and engulfment of the forespore compartment during sporulation [H]

COG id: COG1300

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002798
- InterPro:   IPR014196 [H]

Pfam domain/function: PF01944 DUF95 [H]

EC number: NA

Molecular weight: Translated: 24035; Mature: 24035

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GDTPINYENLLINVIKKNMLLIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKSKFFKRANLNDPFFNSLGNKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IVILGFFVFAAIIETYVSPNFIKFVVTKFY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MVNYMVNKLGQTFKDKKVYFFMVLIMFCIGISFGLYVVKYMSESNRNDLLSYFSSFTSSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GDTPINYENLLINVIKKNMLLIIPIFMFGFTFFGMPFILVLDMFKGFTLGYTFSFILTTF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
QGKGIGLALVSVIPQNLIYIPCFIALSVIALAMSTQKFKSKFFKRANLNDPFFNSLGNKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IVILGFFVFAAIIETYVSPNFIKFVVTKFY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501064; 8969508; 9384377 [H]