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The map label for this gene is nsrR [H]

Identifier: 187930672

GI number: 187930672

Start: 3778359

End: 3778838

Strand: Reverse

Name: nsrR [H]

Synonym: Rpic_3608

Alternate gene names: 187930672

Gene position: 3778838-3778359 (Counterclockwise)

Preceding gene: 187930678

Following gene: 187930671

Centisome position: 95.85

GC content: 67.08

Gene sequence:

>480_bases
ATGCGACTGACCGACTACACCGACTACGCCCTGCGCACGCTGATCTACGTGGCCGTGCACCCGGACGAGCTCGTCACGAT
CCAGCGCATTGCAGATGCCTTCGACATTCCCAAGAACCACCTCATCAAGATCGTCCAGCAGCTTGGGCAGGACGGCTTCC
TGCATACCGTGCGGGGGCGCGCGGGGGGCATCACGCTCGGCCGCCCGGCCGCCGAAATCAACCTCGGCGACGTGGTCCGC
GCCACCGAGCCCGACTTCCGCATGGTCGAGTGCTTCCACGGCGACGACAACCACTGCGTCATCACGCGCGTGTGCGGCCT
GCGTGGCGTGCTGCACGCGGCGTTGCGGGCGTACTTTGAGGTGCTCGACGGCTATACGCTGCAGGATCTGGCCGACAAAC
CGAATGCGGTCAGCCGCGCATTGGGCGAGGCACCGCTGCCGATGCCGCGTGCGGCCCGGCGCAAAGGCGTTGCAGCGTAG

Upstream 100 bases:

>100_bases
CAAATTGACCTGCGGCAAACCGGCGCATCTTGTGCGCAACTTCCCGATAAGATGTGCCTCTCATGAATGTTTCTACCTGC
GGCAACGCCGCACGCCCGCC

Downstream 100 bases:

>100_bases
GCGCTCGTCGGAGTTGCCGTAGCACAGCACTGAAGCACGATGTCGGGCCTACGTAACTCAGCTGTCGCCCGCCCCCAGCT
CTTTCCACCCCGCCGCACCG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRLTDYTDYALRTLIYVAVHPDELVTIQRIADAFDIPKNHLIKIVQQLGQDGFLHTVRGRAGGITLGRPAAEINLGDVVR
ATEPDFRMVECFHGDDNHCVITRVCGLRGVLHAALRAYFEVLDGYTLQDLADKPNAVSRALGEAPLPMPRAARRKGVAA

Sequences:

>Translated_159_residues
MRLTDYTDYALRTLIYVAVHPDELVTIQRIADAFDIPKNHLIKIVQQLGQDGFLHTVRGRAGGITLGRPAAEINLGDVVR
ATEPDFRMVECFHGDDNHCVITRVCGLRGVLHAALRAYFEVLDGYTLQDLADKPNAVSRALGEAPLPMPRAARRKGVAA
>Mature_159_residues
MRLTDYTDYALRTLIYVAVHPDELVTIQRIADAFDIPKNHLIKIVQQLGQDGFLHTVRGRAGGITLGRPAAEINLGDVVR
ATEPDFRMVECFHGDDNHCVITRVCGLRGVLHAALRAYFEVLDGYTLQDLADKPNAVSRALGEAPLPMPRAARRKGVAA

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=142, Percent_Identity=40.1408450704225, Blast_Score=116, Evalue=6e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17515; Mature: 17515

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTDYTDYALRTLIYVAVHPDELVTIQRIADAFDIPKNHLIKIVQQLGQDGFLHTVRGR
CCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCC
AGGITLGRPAAEINLGDVVRATEPDFRMVECFHGDDNHCVITRVCGLRGVLHAALRAYFE
CCCEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHH
VLDGYTLQDLADKPNAVSRALGEAPLPMPRAARRKGVAA
HHCCCCHHHHHCCCHHHHHHHCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MRLTDYTDYALRTLIYVAVHPDELVTIQRIADAFDIPKNHLIKIVQQLGQDGFLHTVRGR
CCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCC
AGGITLGRPAAEINLGDVVRATEPDFRMVECFHGDDNHCVITRVCGLRGVLHAALRAYFE
CCCEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHH
VLDGYTLQDLADKPNAVSRALGEAPLPMPRAARRKGVAA
HHCCCCHHHHHCCCHHHHHHHCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA