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The map label for this gene is rcsB [H]

Identifier: 187930483

GI number: 187930483

Start: 3583728

End: 3584426

Strand: Reverse

Name: rcsB [H]

Synonym: Rpic_3417

Alternate gene names: 187930483

Gene position: 3584426-3583728 (Counterclockwise)

Preceding gene: 187930484

Following gene: 187930481

Centisome position: 90.92

GC content: 62.52

Gene sequence:

>699_bases
ATGAATTGGACCGCGACCCGGCCGATCCGCGTGATCGTGCTCGATGACCATGCGGTTGTCCGCCATGGTCTGGCTGCGCG
CCTGAAACAGGAGGCCGACATCGAGGTTTCCGGCATGTTCGCCTCGGGTCGCGAAATCGTGCAGGCACTCAAAGACAAAA
GCCTTGAGGTGGATGTCCTGCTGATGGACTACTCGCTCGGACCCACCGAGATTGACGGGCTGAACCTGATCCGCCTGATC
CGCGTGCGCTATCCGGACTTGAAGATCCTGGTGGCGTCGGCGCATCACAACATGGCGACGGTGGGCATGGTCATGCATGC
CGGCGCACGCGGTTTTGTCGGCAAGGAAGAGGATCTGTCGGAATTGGTACGCGCCATCCGCACGGTGGCCGCGGGCGGCA
AGCGCCTGAATGCCGCGCTGGCTGCCGAGATGGAGCGCGATGCGCTTTCCGCCGATGCGCCCGCGCCCGTCACCAATGGC
ACCAAGCTGTCCGCCCTGATCGACCGCTCCGAACTCAGCCCGCGCGAGCGCGAGGTACTGCGCTGCTGCCTGGACGGCAT
GTCGGTCACGGACATTGCCGAGAAATTTGCGCGCAGCATCAAGACGATCAGCTCGCAAAAGCAATCGGCCTATCGCAAGC
TGGGTATTCGCACCGATACCGAGCTGTTCAAGATCAAGCACGAGCTTGAGGGGCAGTGA

Upstream 100 bases:

>100_bases
ACCGTTGCTACGCCGGAATGCTATTAAGATGTCGGCCTCTGCGGCATCTTGGGGCGCTCTTGTGCTGCGAGTAATCCCCG
TCGAATAGGAACCTGCCAAC

Downstream 100 bases:

>100_bases
GCGCTAAGCGGCACCCGCCCGAGCCCCAGCGCACCGGCAACGCTGTCGGCTGAGACTGCCCAACCGAAAACGCCTGATCC
GATCAGGCGTTGTGCAGCAC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNWTATRPIRVIVLDDHAVVRHGLAARLKQEADIEVSGMFASGREIVQALKDKSLEVDVLLMDYSLGPTEIDGLNLIRLI
RVRYPDLKILVASAHHNMATVGMVMHAGARGFVGKEEDLSELVRAIRTVAAGGKRLNAALAAEMERDALSADAPAPVTNG
TKLSALIDRSELSPREREVLRCCLDGMSVTDIAEKFARSIKTISSQKQSAYRKLGIRTDTELFKIKHELEGQ

Sequences:

>Translated_232_residues
MNWTATRPIRVIVLDDHAVVRHGLAARLKQEADIEVSGMFASGREIVQALKDKSLEVDVLLMDYSLGPTEIDGLNLIRLI
RVRYPDLKILVASAHHNMATVGMVMHAGARGFVGKEEDLSELVRAIRTVAAGGKRLNAALAAEMERDALSADAPAPVTNG
TKLSALIDRSELSPREREVLRCCLDGMSVTDIAEKFARSIKTISSQKQSAYRKLGIRTDTELFKIKHELEGQ
>Mature_232_residues
MNWTATRPIRVIVLDDHAVVRHGLAARLKQEADIEVSGMFASGREIVQALKDKSLEVDVLLMDYSLGPTEIDGLNLIRLI
RVRYPDLKILVASAHHNMATVGMVMHAGARGFVGKEEDLSELVRAIRTVAAGGKRLNAALAAEMERDALSADAPAPVTNG
TKLSALIDRSELSPREREVLRCCLDGMSVTDIAEKFARSIKTISSQKQSAYRKLGIRTDTELFKIKHELEGQ

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=216, Percent_Identity=34.2592592592593, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790102, Length=215, Percent_Identity=32.5581395348837, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1788222, Length=223, Percent_Identity=31.8385650224215, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786747, Length=216, Percent_Identity=26.3888888888889, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25484; Mature: 25484

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWTATRPIRVIVLDDHAVVRHGLAARLKQEADIEVSGMFASGREIVQALKDKSLEVDVL
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCEEEEE
LMDYSLGPTEIDGLNLIRLIRVRYPDLKILVASAHHNMATVGMVMHAGARGFVGKEEDLS
EEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHH
ELVRAIRTVAAGGKRLNAALAAEMERDALSADAPAPVTNGTKLSALIDRSELSPREREVL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
RCCLDGMSVTDIAEKFARSIKTISSQKQSAYRKLGIRTDTELFKIKHELEGQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNWTATRPIRVIVLDDHAVVRHGLAARLKQEADIEVSGMFASGREIVQALKDKSLEVDVL
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCEEEEE
LMDYSLGPTEIDGLNLIRLIRVRYPDLKILVASAHHNMATVGMVMHAGARGFVGKEEDLS
EEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHH
ELVRAIRTVAAGGKRLNAALAAEMERDALSADAPAPVTNGTKLSALIDRSELSPREREVL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
RCCLDGMSVTDIAEKFARSIKTISSQKQSAYRKLGIRTDTELFKIKHELEGQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]