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The map label for this gene is ynfM [H]

Identifier: 187930415

GI number: 187930415

Start: 3507537

End: 3508826

Strand: Reverse

Name: ynfM [H]

Synonym: Rpic_3349

Alternate gene names: 187930415

Gene position: 3508826-3507537 (Counterclockwise)

Preceding gene: 187930417

Following gene: 187930414

Centisome position: 89.0

GC content: 68.53

Gene sequence:

>1290_bases
GTGAACGCTCCGCTTCCGCCTTCGCCGACCCATTCGCCGTCTCCGCCGCCGTCCCCTCTACCCGCCATCGAACCCGCTGA
TCATTCCCGCTGGCTGGTCCGGGGCCATCCTGGCTATCTGCGCGCCAATCTGGCGCTGTTCGCGGCGGGATTTTCCACGT
TCTCGCTGCTGTATTGCGTGCAGCCGCTAATGCCGCTGCTGGCGCACGACTTTGGCCTCACCCCCGCGCAGACGAGCTTG
GTGCTGTCGGTGTCCACGCTGCTGCTGGCGTTTGCGATCCTGTTTGCGGGGCTGCTGTCGGAGTCGATCCATCGCAAGAC
GCTGATGGGCGTGTCACTGGTGCTGTCGTCGGTGCTCACGCTGGCGGCGGCGGTGTTGCCAGGCTGGCACGGGTTGCTGG
CCACGCGGGCGTTGCTCGGCGTGGTGCTGGGTGGCGTGCCTGCGGTGGCCATGGCGTATCTGGCCGAGGAGGTGCATCCG
CAAGGGCTGGGCATGGCGATGGGCCTGTACGTCGGCGGGACGGCGTTCGGCGGGATGGCGGGGCGTGTGATGACCGGCGC
CGTGGCGGACCATTTCGGTTGGCGCGCCGCCATCGGTTTTACCGGCATGCTGGGTTTGCTCGCGGCAATGGCCTTCCTGT
GGCTGCTGCCGCCGTCGCGCCGCTTTGTGCCGCGCAAGGGTGTGGCGCTGGCCGATCTGTTCGACACGCTGGGCGCCCAT
CTGCGCGAGCCGGGTCTGCGCGCGCTGTTCGCCATGGGCTTCTTGCTGATGGGCGGCTTCGTCACGATCTACAACTACGC
GAGTTTTCACTTGCTCGATGCGCCGTATGCTCTCAGCCAGACGGCGGTGGGCGGCATCTTCATGGTGTACCTGCTCGGCA
TTGGTGCCTCTGCATGGTTCGGCCGATTGGCGGATCGCCATGGCCGGGGCCGCATGCTGCTGGCGGGCACGGTGCTGATG
TCGGCGGGTGTGCTGCTGACCTTGGCGGGGCCGCTGCTGCTGGTGATTGGCGGCATCGCGCTGCTCACCTTTGGTTTTTT
CGGTGCGCACGCGGTGGCCAGCGGCTGGGTCGGGCGCCGCGCGCAGCGTGCCAAGGGGCAGGCGGCAGCGCTGTATTTGC
TGGCGTACTACCTGGGCTCCAGCCTGATCGGCACGACAGGCGGCAAGCTCTACGCGCCGTGGGGCTGGCCGGGCGTCGTG
ACGCTGGTGATGGGCTGCATGGCATGTGCGCTGGGCACGGCCGTCTGGCTCTGGCGGCGCGCCCCGCTGCCACCGGGCGC
CAAGCGCTGA

Upstream 100 bases:

>100_bases
ATGGAGGCTGCGCAGCAAGGTCGATGTCGCATCGCAGCAGGAACGGTGCCTGCGAACGATAATAGGCGCCCGCCCCTGCG
CTTGTTTCAACCCGCCCGCC

Downstream 100 bases:

>100_bases
GGTTGTACGCCCGGGGAATTCGCGTATCGTGCCGTGATCGATGTCTGCACGATCGCTTTCCCTGTCATGCGTACTCATTC
CCTGTTTTGCACGCGGCGAC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MNAPLPPSPTHSPSPPPSPLPAIEPADHSRWLVRGHPGYLRANLALFAAGFSTFSLLYCVQPLMPLLAHDFGLTPAQTSL
VLSVSTLLLAFAILFAGLLSESIHRKTLMGVSLVLSSVLTLAAAVLPGWHGLLATRALLGVVLGGVPAVAMAYLAEEVHP
QGLGMAMGLYVGGTAFGGMAGRVMTGAVADHFGWRAAIGFTGMLGLLAAMAFLWLLPPSRRFVPRKGVALADLFDTLGAH
LREPGLRALFAMGFLLMGGFVTIYNYASFHLLDAPYALSQTAVGGIFMVYLLGIGASAWFGRLADRHGRGRMLLAGTVLM
SAGVLLTLAGPLLLVIGGIALLTFGFFGAHAVASGWVGRRAQRAKGQAAALYLLAYYLGSSLIGTTGGKLYAPWGWPGVV
TLVMGCMACALGTAVWLWRRAPLPPGAKR

Sequences:

>Translated_429_residues
MNAPLPPSPTHSPSPPPSPLPAIEPADHSRWLVRGHPGYLRANLALFAAGFSTFSLLYCVQPLMPLLAHDFGLTPAQTSL
VLSVSTLLLAFAILFAGLLSESIHRKTLMGVSLVLSSVLTLAAAVLPGWHGLLATRALLGVVLGGVPAVAMAYLAEEVHP
QGLGMAMGLYVGGTAFGGMAGRVMTGAVADHFGWRAAIGFTGMLGLLAAMAFLWLLPPSRRFVPRKGVALADLFDTLGAH
LREPGLRALFAMGFLLMGGFVTIYNYASFHLLDAPYALSQTAVGGIFMVYLLGIGASAWFGRLADRHGRGRMLLAGTVLM
SAGVLLTLAGPLLLVIGGIALLTFGFFGAHAVASGWVGRRAQRAKGQAAALYLLAYYLGSSLIGTTGGKLYAPWGWPGVV
TLVMGCMACALGTAVWLWRRAPLPPGAKR
>Mature_429_residues
MNAPLPPSPTHSPSPPPSPLPAIEPADHSRWLVRGHPGYLRANLALFAAGFSTFSLLYCVQPLMPLLAHDFGLTPAQTSL
VLSVSTLLLAFAILFAGLLSESIHRKTLMGVSLVLSSVLTLAAAVLPGWHGLLATRALLGVVLGGVPAVAMAYLAEEVHP
QGLGMAMGLYVGGTAFGGMAGRVMTGAVADHFGWRAAIGFTGMLGLLAAMAFLWLLPPSRRFVPRKGVALADLFDTLGAH
LREPGLRALFAMGFLLMGGFVTIYNYASFHLLDAPYALSQTAVGGIFMVYLLGIGASAWFGRLADRHGRGRMLLAGTVLM
SAGVLLTLAGPLLLVIGGIALLTFGFFGAHAVASGWVGRRAQRAKGQAAALYLLAYYLGSSLIGTTGGKLYAPWGWPGVV
TLVMGCMACALGTAVWLWRRAPLPPGAKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=405, Percent_Identity=44.9382716049383, Blast_Score=338, Evalue=3e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44891; Mature: 44891

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPLPPSPTHSPSPPPSPLPAIEPADHSRWLVRGHPGYLRANLALFAAGFSTFSLLYCV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
QPLMPLLAHDFGLTPAQTSLVLSVSTLLLAFAILFAGLLSESIHRKTLMGVSLVLSSVLT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAAVLPGWHGLLATRALLGVVLGGVPAVAMAYLAEEVHPQGLGMAMGLYVGGTAFGGMA
HHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCHH
GRVMTGAVADHFGWRAAIGFTGMLGLLAAMAFLWLLPPSRRFVPRKGVALADLFDTLGAH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LREPGLRALFAMGFLLMGGFVTIYNYASFHLLDAPYALSQTAVGGIFMVYLLGIGASAWF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCHHHHH
GRLADRHGRGRMLLAGTVLMSAGVLLTLAGPLLLVIGGIALLTFGFFGAHAVASGWVGRR
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRAKGQAAALYLLAYYLGSSLIGTTGGKLYAPWGWPGVVTLVMGCMACALGTAVWLWRR
HHHHCCHHHHHHHHHHHHCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
APLPPGAKR
CCCCCCCCC
>Mature Secondary Structure
MNAPLPPSPTHSPSPPPSPLPAIEPADHSRWLVRGHPGYLRANLALFAAGFSTFSLLYCV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
QPLMPLLAHDFGLTPAQTSLVLSVSTLLLAFAILFAGLLSESIHRKTLMGVSLVLSSVLT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAAVLPGWHGLLATRALLGVVLGGVPAVAMAYLAEEVHPQGLGMAMGLYVGGTAFGGMA
HHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCHH
GRVMTGAVADHFGWRAAIGFTGMLGLLAAMAFLWLLPPSRRFVPRKGVALADLFDTLGAH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LREPGLRALFAMGFLLMGGFVTIYNYASFHLLDAPYALSQTAVGGIFMVYLLGIGASAWF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCHHHHH
GRLADRHGRGRMLLAGTVLMSAGVLLTLAGPLLLVIGGIALLTFGFFGAHAVASGWVGRR
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRAKGQAAALYLLAYYLGSSLIGTTGGKLYAPWGWPGVVTLVMGCMACALGTAVWLWRR
HHHHCCHHHHHHHHHHHHCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
APLPPGAKR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]