Click here to switch to the map view.

The map label for this gene is 187930308

Identifier: 187930308

GI number: 187930308

Start: 3385439

End: 3386479

Strand: Reverse

Name: 187930308

Synonym: Rpic_3241

Alternate gene names: NA

Gene position: 3386479-3385439 (Counterclockwise)

Preceding gene: 187930309

Following gene: 187930307

Centisome position: 85.9

GC content: 69.45

Gene sequence:

>1041_bases
ATGCGACCTCGCGCCCGCAATGTGCGTGCAGATGTGCCCCACGCGCCCGATGTGCTGGATCGGCAGCGGCGGCGAGCGCT
TGCGTGGCTTGGCGTGCTGCCGGCGATGCTGGCGTCGCCCGCGCGTGCTTTGCTGCAAGGGTATCCGTCGCAACCGCTGC
GTCTGGTCGTGCCGGCGGCGGAAGGCAGCGCATTCGATGCACTGGCGCGCGCACTCGCGACGCAACTGCAGCAGCAGGTC
GGCCGCGAGGTGGGCGTCGAAGATCGCCCGGCAGCCAATGGCATGGCCGCCGGCGAGGCCGTCGCCCGCGCGCCCTCCGA
TGGCCACACGTTGCTGCTCCAGCAGACCACGTTCGTCGCCCAGCCCGCGCTCGAGCCGGCGTCATATGACCCGCTGCGCG
ATTTCCAGCCGGTCGCGATGGTGGCCACGCTGCCCCTGTTTCTCGCGGTCGATGCGCGCTTGCCGATCCATTCCGTGACC
GATCTGCTCGCGCAGGCGCGCGGTGAGTCCGTCACGGTCAATTGCGGCTCGGATATCGTCGGCACGTGGTCGCACCTTGT
CGCCGAGCAGTTTGTGCGCGACTACGCTTTCCATGCGCCGCATGTGGTCGTCCGCGGTGAAGCAGGGCTCGTGCAACAGA
TCCTGGCTGGGCGCATGACGGCGTGTTTCGCCTGCTATCCGAGTGTGGCGGCCGCCGCGGCCAACGGCCAGCTACGGTTG
CTCGGGGTGACGGGCGGGGCTCGCTCGCGTTTCGCGCCCGCTGTGCCGACCCTGCGCGAAGGCGGTCTCGCCGGATTCGA
TCGCAGCGCCTGGATCGGCACCTTCATGCCGGCGCGCACACCCCGGCCTTTCTCGATGCGCGCGGCGGCCGAATTGCGGC
GCGCCGTCGCTTCAGGTGATGTCCACGCTACGCTGCGTGCCGGCGGCTTTGAACCCGAATGGGATGCCCCCGACACGTTC
GCCCAGACCGTGCGCAGTGACGCGACGCACTGGCAGGGGGTGATTCGCCAAGCCGATCTACGGCTGGATAGCGGCGAATA
G

Upstream 100 bases:

>100_bases
AGCGTCATGCCTCATGGTTTACGTCGACATGGTTTACATGAGTGCAGTGCGGACAGGCGGATTTCTAGAATGAGATCTCC
CCGTGATCCCCAACTGCCTC

Downstream 100 bases:

>100_bases
GCTGCTCCCGCTGTCGCCGCAGGTGCCAACGCCAGCTTCGCAGGTGCACCACTTTCAGCAGCCCGCAAGACCCGGAAACC
CCCAGCGCGGCGAACAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRPRARNVRADVPHAPDVLDRQRRRALAWLGVLPAMLASPARALLQGYPSQPLRLVVPAAEGSAFDALARALATQLQQQV
GREVGVEDRPAANGMAAGEAVARAPSDGHTLLLQQTTFVAQPALEPASYDPLRDFQPVAMVATLPLFLAVDARLPIHSVT
DLLAQARGESVTVNCGSDIVGTWSHLVAEQFVRDYAFHAPHVVVRGEAGLVQQILAGRMTACFACYPSVAAAAANGQLRL
LGVTGGARSRFAPAVPTLREGGLAGFDRSAWIGTFMPARTPRPFSMRAAAELRRAVASGDVHATLRAGGFEPEWDAPDTF
AQTVRSDATHWQGVIRQADLRLDSGE

Sequences:

>Translated_346_residues
MRPRARNVRADVPHAPDVLDRQRRRALAWLGVLPAMLASPARALLQGYPSQPLRLVVPAAEGSAFDALARALATQLQQQV
GREVGVEDRPAANGMAAGEAVARAPSDGHTLLLQQTTFVAQPALEPASYDPLRDFQPVAMVATLPLFLAVDARLPIHSVT
DLLAQARGESVTVNCGSDIVGTWSHLVAEQFVRDYAFHAPHVVVRGEAGLVQQILAGRMTACFACYPSVAAAAANGQLRL
LGVTGGARSRFAPAVPTLREGGLAGFDRSAWIGTFMPARTPRPFSMRAAAELRRAVASGDVHATLRAGGFEPEWDAPDTF
AQTVRSDATHWQGVIRQADLRLDSGE
>Mature_346_residues
MRPRARNVRADVPHAPDVLDRQRRRALAWLGVLPAMLASPARALLQGYPSQPLRLVVPAAEGSAFDALARALATQLQQQV
GREVGVEDRPAANGMAAGEAVARAPSDGHTLLLQQTTFVAQPALEPASYDPLRDFQPVAMVATLPLFLAVDARLPIHSVT
DLLAQARGESVTVNCGSDIVGTWSHLVAEQFVRDYAFHAPHVVVRGEAGLVQQILAGRMTACFACYPSVAAAAANGQLRL
LGVTGGARSRFAPAVPTLREGGLAGFDRSAWIGTFMPARTPRPFSMRAAAELRRAVASGDVHATLRAGGFEPEWDAPDTF
AQTVRSDATHWQGVIRQADLRLDSGE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 36922; Mature: 36922

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRARNVRADVPHAPDVLDRQRRRALAWLGVLPAMLASPARALLQGYPSQPLRLVVPAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
EGSAFDALARALATQLQQQVGREVGVEDRPAANGMAAGEAVARAPSDGHTLLLQQTTFVA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECHHHHH
QPALEPASYDPLRDFQPVAMVATLPLFLAVDARLPIHSVTDLLAQARGESVTVNCGSDIV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHH
GTWSHLVAEQFVRDYAFHAPHVVVRGEAGLVQQILAGRMTACFACYPSVAAAAANGQLRL
HHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LGVTGGARSRFAPAVPTLREGGLAGFDRSAWIGTFMPARTPRPFSMRAAAELRRAVASGD
EEECCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
VHATLRAGGFEPEWDAPDTFAQTVRSDATHWQGVIRQADLRLDSGE
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRPRARNVRADVPHAPDVLDRQRRRALAWLGVLPAMLASPARALLQGYPSQPLRLVVPAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
EGSAFDALARALATQLQQQVGREVGVEDRPAANGMAAGEAVARAPSDGHTLLLQQTTFVA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECHHHHH
QPALEPASYDPLRDFQPVAMVATLPLFLAVDARLPIHSVTDLLAQARGESVTVNCGSDIV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHH
GTWSHLVAEQFVRDYAFHAPHVVVRGEAGLVQQILAGRMTACFACYPSVAAAAANGQLRL
HHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LGVTGGARSRFAPAVPTLREGGLAGFDRSAWIGTFMPARTPRPFSMRAAAELRRAVASGD
EEECCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
VHATLRAGGFEPEWDAPDTFAQTVRSDATHWQGVIRQADLRLDSGE
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]