Click here to switch to the map view.

The map label for this gene is sspA [H]

Identifier: 187930270

GI number: 187930270

Start: 3351822

End: 3352433

Strand: Reverse

Name: sspA [H]

Synonym: Rpic_3203

Alternate gene names: 187930270

Gene position: 3352433-3351822 (Counterclockwise)

Preceding gene: 187930271

Following gene: 187930269

Centisome position: 85.03

GC content: 58.99

Gene sequence:

>612_bases
ATGATGGTCTTGTACTCGGGCACCACTTGCCCGTTCTCGCAGCGTTGCCGCCTCGTCCTGTTCGAAAAGGGCATGGATTT
CGAGATTCGCGACGTCGATCTCTTCAACAAGCCGGAAGATATCGCGGTGATGAACCCGTACGGCCAGGTGCCCATCCTGG
TTGAACGCGACCTGATTCTGTACGAGTCGAACATCATCAATGAGTACATCGACGAGCGCTTCCCGCACCCGCAGCTGATG
CCGGCCGATCCGGTGCAGCGCGCCCGCGCCCGCCTGTTCCTGTTCAACTTCGAGAAGGAACTGTTCACGCACGTCTCCGT
GCTCGAGAACGAAAAGGGCAAGGCCGCCGAGAAGAATCACGAGAAGGCACGTGCGGCCATCCGCGATCGCCTTACGCAGC
TGGCTCCGATCTTCCTGAAGAACAAGTACATGCTGGGCGAAGAGTTCTCGATGCTCGACGTGGCGATTGCGCCGCTGCTG
TGGCGCCTGGACCACTACGGCATTGAAGTCTCGAAGAACGCCGCCCCGCTGATGAAATACGCTGAGCGTATCTTTAGCCG
TCCGGCGTATATTGAAGCGCTGACGCCGTCGGAAAAGGTCATGCGCCGCTGA

Upstream 100 bases:

>100_bases
CCTTTGCCTTTTCGCTTTTTGTGCCGTGGCGATGTCATTTGTCGTCACGGTTGTACCGTCATCGGGCCGCCCCCGGCCCA
TGCGCCAAGGAACTACAACC

Downstream 100 bases:

>100_bases
TTGCCGCCGGGTCGCGCCGCGCTCGGGTCGAGCCTGCGCGCGGCCGCGCCCAACGGTCACTGATTTCATCATGTCGGAAA
CTTCCACCAAGCCCTATCTG

Product: glutathione S-transferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MMVLYSGTTCPFSQRCRLVLFEKGMDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLM
PADPVQRARARLFLFNFEKELFTHVSVLENEKGKAAEKNHEKARAAIRDRLTQLAPIFLKNKYMLGEEFSMLDVAIAPLL
WRLDHYGIEVSKNAAPLMKYAERIFSRPAYIEALTPSEKVMRR

Sequences:

>Translated_203_residues
MMVLYSGTTCPFSQRCRLVLFEKGMDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLM
PADPVQRARARLFLFNFEKELFTHVSVLENEKGKAAEKNHEKARAAIRDRLTQLAPIFLKNKYMLGEEFSMLDVAIAPLL
WRLDHYGIEVSKNAAPLMKYAERIFSRPAYIEALTPSEKVMRR
>Mature_203_residues
MMVLYSGTTCPFSQRCRLVLFEKGMDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLM
PADPVQRARARLFLFNFEKELFTHVSVLENEKGKAAEKNHEKARAAIRDRLTQLAPIFLKNKYMLGEEFSMLDVAIAPLL
WRLDHYGIEVSKNAAPLMKYAERIFSRPAYIEALTPSEKVMRR

Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI38016131, Length=184, Percent_Identity=33.695652173913, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI4758484, Length=200, Percent_Identity=32, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI300360569, Length=175, Percent_Identity=34.2857142857143, Blast_Score=94, Evalue=6e-20,
Organism=Homo sapiens, GI300360534, Length=194, Percent_Identity=31.9587628865979, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI300360532, Length=197, Percent_Identity=30.9644670050761, Blast_Score=84, Evalue=6e-17,
Organism=Homo sapiens, GI300360567, Length=180, Percent_Identity=29.4444444444444, Blast_Score=80, Evalue=9e-16,
Organism=Homo sapiens, GI300360571, Length=171, Percent_Identity=29.8245614035088, Blast_Score=78, Evalue=4e-15,
Organism=Escherichia coli, GI1789624, Length=203, Percent_Identity=44.8275862068966, Blast_Score=174, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI17551302, Length=198, Percent_Identity=29.7979797979798, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25144449, Length=164, Percent_Identity=27.4390243902439, Blast_Score=63, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24660979, Length=176, Percent_Identity=30.1136363636364, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355779, Length=164, Percent_Identity=30.4878048780488, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23686; Mature: 23686

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVLYSGTTCPFSQRCRLVLFEKGMDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLIL
CEEEEECCCCCHHHCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCCEEEECCEEE
YESNIINEYIDERFPHPQLMPADPVQRARARLFLFNFEKELFTHVSVLENEKGKAAEKNH
EHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCCHHHHH
EKARAAIRDRLTQLAPIFLKNKYMLGEEFSMLDVAIAPLLWRLDHYGIEVSKNAAPLMKY
HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHH
AERIFSRPAYIEALTPSEKVMRR
HHHHHCCCCEEEEECCHHHHHCC
>Mature Secondary Structure
MMVLYSGTTCPFSQRCRLVLFEKGMDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLIL
CEEEEECCCCCHHHCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCCCEEEECCEEE
YESNIINEYIDERFPHPQLMPADPVQRARARLFLFNFEKELFTHVSVLENEKGKAAEKNH
EHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCCHHHHH
EKARAAIRDRLTQLAPIFLKNKYMLGEEFSMLDVAIAPLLWRLDHYGIEVSKNAAPLMKY
HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHH
AERIFSRPAYIEALTPSEKVMRR
HHHHHCCCCEEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]