| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187930246
Identifier: 187930246
GI number: 187930246
Start: 3334408
End: 3334695
Strand: Reverse
Name: 187930246
Synonym: Rpic_3179
Alternate gene names: NA
Gene position: 3334695-3334408 (Counterclockwise)
Preceding gene: 187930247
Following gene: 187930245
Centisome position: 84.58
GC content: 67.01
Gene sequence:
>288_bases TTGACGCTGGCGCTGCTCTGGAACCCAAGGGCGCGTGAGGACCGCGCCGCCATCATGGACTACATCGGCCAGGACAACCC GGTGGCCGCGCTTGAGCTGGACGAACTGATCGAGCAGAGGGCCGAAGCCTTGCCGGCGCATCCGAAGCAGTATCGGCCGG GGCGCGTGCGCGGCACGCGCGAGGCCGTGGTGACGGAAAACTACCTGATCGTTTATCGCGTGACGGACAAGCGCGTGGAG ATCCTCCGCGTGCTGCACGCGCGCCAGCAGTGGCCTGCAGAAGGGTGA
Upstream 100 bases:
>100_bases ATGACCCGCGCCCATCCATTCCTCACGCCGAGGTCAAGGCCGAGTTTGCCGCGCGCCGCGCGGCGCTGCGGCAGCGGATC GCGAAGCGCGGGGGTAACGC
Downstream 100 bases:
>100_bases GCCCATGTCGAATCGGAAGTTCACATGCCTCTCTACAACCCGTGGACACGGATGTACCACCTCTACCGGGTGGGGACGGA CAGCCTGATGAGGTTTCGCA
Product: RelE/StbE family addiction module toxin
Products: NA
Alternate protein names: Addiction Module xin RelE/StbE Family; Plasmid Stabilization System Protein; Plasmid Stabilization System; Addiction Module xin RelE/StbE; YacB Protein; Stability Determinant; RelE/ParE Family Addiction Module xin; Addiction Module; Plasmid Stabilization System Protein RelE/ParE Family; Plasmid Stabilisation System Protein; Plasmid Stabilization-Like Protein Prophage; Plasmid Stabilisation System Protein YacB; Addiction Module xin RelE/StbE Family Protein; DNA Damage Inducible Protein YafQ; Addiction Module xin
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MTLALLWNPRAREDRAAIMDYIGQDNPVAALELDELIEQRAEALPAHPKQYRPGRVRGTREAVVTENYLIVYRVTDKRVE ILRVLHARQQWPAEG
Sequences:
>Translated_95_residues MTLALLWNPRAREDRAAIMDYIGQDNPVAALELDELIEQRAEALPAHPKQYRPGRVRGTREAVVTENYLIVYRVTDKRVE ILRVLHARQQWPAEG >Mature_94_residues TLALLWNPRAREDRAAIMDYIGQDNPVAALELDELIEQRAEALPAHPKQYRPGRVRGTREAVVTENYLIVYRVTDKRVEI LRVLHARQQWPAEG
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10990; Mature: 10859
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLALLWNPRAREDRAAIMDYIGQDNPVAALELDELIEQRAEALPAHPKQYRPGRVRGTR CEEEEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EAVVTENYLIVYRVTDKRVEILRVLHARQQWPAEG CEEEECCEEEEEEECCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLALLWNPRAREDRAAIMDYIGQDNPVAALELDELIEQRAEALPAHPKQYRPGRVRGTR EEEEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EAVVTENYLIVYRVTDKRVEILRVLHARQQWPAEG CEEEECCEEEEEEECCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA