| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is apaG [H]
Identifier: 187930188
GI number: 187930188
Start: 3269226
End: 3269600
Strand: Reverse
Name: apaG [H]
Synonym: Rpic_3120
Alternate gene names: 187930188
Gene position: 3269600-3269226 (Counterclockwise)
Preceding gene: 187930198
Following gene: 187930186
Centisome position: 82.93
GC content: 64.0
Gene sequence:
>375_bases ATGCCAAGCTACGAACTCACCGTCCAGGTCCGGACGCGCTATCTGCCGGAGCAATCCGAGCCGGAGCAGGGCAGCTACGC CTTCGCCTACACCATCACCATCCGCAATACCGGCGACGTGCCGAGCCAGCTCATTTCACGCCACTGGGTGATTACCGACG CCGAAGAGCAGGTCCAGGAAGTGAACGGCCTCGGCGTGGTCGGCCATCAGCCGCTGCTCCCGCCGGGTGAATCCTTCGAG TACACGAGCTGGGCGACCATCAAGACGCCCGTGGGCACGATGCGCGGCGAATATTTCTGCGTGGCCGAAGACGGCCACCG TTTCGAGGCGCCCATCCCCGAATTTGCGCTGGTGATGCCGCGCATGCTGCACTGA
Upstream 100 bases:
>100_bases CAAGGAAGGGCGCTATTTTAGCCGGATCGGACGTCCGCTCGCGCCTTGCCGGTGCCACGGCCATGCCGCACAATGGGCGC CATTCTTATTGTGGATTGTC
Downstream 100 bases:
>100_bases TCGGGAATCAGGGCGCGTCGGAATTGGCGGCTTGAGAATCTTTTGGCGCTGCGTCGGTCGATTGCGAAGGCTTGGCAGCG TCGCCGTGGCGCGACGGATG
Product: ApaG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MPSYELTVQVRTRYLPEQSEPEQGSYAFAYTITIRNTGDVPSQLISRHWVITDAEEQVQEVNGLGVVGHQPLLPPGESFE YTSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALVMPRMLH
Sequences:
>Translated_124_residues MPSYELTVQVRTRYLPEQSEPEQGSYAFAYTITIRNTGDVPSQLISRHWVITDAEEQVQEVNGLGVVGHQPLLPPGESFE YTSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALVMPRMLH >Mature_123_residues PSYELTVQVRTRYLPEQSEPEQGSYAFAYTITIRNTGDVPSQLISRHWVITDAEEQVQEVNGLGVVGHQPLLPPGESFEY TSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALVMPRMLH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI15812188, Length=123, Percent_Identity=40.650406504065, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI15812186, Length=123, Percent_Identity=40.650406504065, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1786235, Length=119, Percent_Identity=47.8991596638655, Blast_Score=121, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356905, Length=105, Percent_Identity=35.2380952380952, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644238, Length=105, Percent_Identity=35.2380952380952, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 14027; Mature: 13896
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSYELTVQVRTRYLPEQSEPEQGSYAFAYTITIRNTGDVPSQLISRHWVITDAEEQVQE CCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHCCEEEECHHHHHHH VNGLGVVGHQPLLPPGESFEYTSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALVMP HCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEECCCCCHHHHHHH RMLH HHCC >Mature Secondary Structure PSYELTVQVRTRYLPEQSEPEQGSYAFAYTITIRNTGDVPSQLISRHWVITDAEEQVQE CCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHCCEEEECHHHHHHH VNGLGVVGHQPLLPPGESFEYTSWATIKTPVGTMRGEYFCVAEDGHRFEAPIPEFALVMP HCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCEECCCCCHHHHHHH RMLH HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]