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The map label for this gene is 187930106

Identifier: 187930106

GI number: 187930106

Start: 3164507

End: 3165067

Strand: Reverse

Name: 187930106

Synonym: Rpic_3038

Alternate gene names: NA

Gene position: 3165067-3164507 (Counterclockwise)

Preceding gene: 187930113

Following gene: 187930094

Centisome position: 80.28

GC content: 63.99

Gene sequence:

>561_bases
ATGGCAACTGCTGCTAAGAAGAAACCGGCCGCCAAGGCCCCGGCCAAGAAGGCCGCTGCAAAGAAGGCTCCGGCCGCCAA
GAAGGCTGCTGCAAAGAAGGCTGCTCCGGCCGCTAAGAAGGCTCCGGCCAAGAAGGTCGCTGCCAAGAAGGCTCCGGCCA
AGAAAGCTGCAGTGAAGAAGGTTGCAGCCAAGAAGGCCCCGGCCAAGAAAGCTGCAGTGAAGAAGGTTGCAGCCAAGAAG
GCCCCGGCCAAGAAAGCTGCAGTGAAGAAGGTTGCAGCCAAGAAGGCCCCGGCCAAGAAAGCTGCAGTGAAGAAGGTTGC
AGCCAAGAAGGCTCCGGCTGCGAAGAAGGCTGCTGCCAAGCCGGCCGCCAAGAAGGCTGCCGCGAAGAAGGCCCCGGCCG
CCAAGAAGGCTGCTGCCAAGCCTGCTGCGAAGAAGGCTCCGGCCAAGAAGGCTGTCGCCAAGCCCGCTGCTGCTCCGGCC
GCTGCACCTGCTGCACCCGCTGCCAAGACCGCGCTGAACCCGGCTGCGGCATGGCCGTTCCCGACCGGCAACCGTCCGTA
A

Upstream 100 bases:

>100_bases
GCTCGCTCGGTTGGTCTGGCGGTGCCAATGCATCGTGGGATCGGGCCGGTCGGGTTGCTCAATCTCGATAGTTCGATACC
CAATCTTGAAGGAGTTTCCC

Downstream 100 bases:

>100_bases
GTCATTCTTACGACGGTGATCCTCCGGGGCCACAGCGGCGCGCACGTCGCGCCCACCTGATCGGATACTGCGTATCCGGT
CCGCAAGACCTTGGTGTCTT

Product: putative histone H1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MATAAKKKPAAKAPAKKAAAKKAPAAKKAAAKKAAPAAKKAPAKKVAAKKAPAKKAAVKKVAAKKAPAKKAAVKKVAAKK
APAKKAAVKKVAAKKAPAKKAAVKKVAAKKAPAAKKAAAKPAAKKAAAKKAPAAKKAAAKPAAKKAPAKKAVAKPAAAPA
AAPAAPAAKTALNPAAAWPFPTGNRP

Sequences:

>Translated_186_residues
MATAAKKKPAAKAPAKKAAAKKAPAAKKAAAKKAAPAAKKAPAKKVAAKKAPAKKAAVKKVAAKKAPAKKAAVKKVAAKK
APAKKAAVKKVAAKKAPAKKAAVKKVAAKKAPAAKKAAAKPAAKKAAAKKAPAAKKAAAKPAAKKAPAKKAVAKPAAAPA
AAPAAPAAKTALNPAAAWPFPTGNRP
>Mature_185_residues
ATAAKKKPAAKAPAKKAAAKKAPAAKKAAAKKAAPAAKKAPAKKVAAKKAPAKKAAVKKVAAKKAPAKKAAVKKVAAKKA
PAKKAAVKKVAAKKAPAKKAAVKKVAAKKAPAAKKAAAKPAAKKAAAKKAPAAKKAAAKPAAKKAPAKKAVAKPAAAPAA
APAAPAAKTALNPAAAWPFPTGNRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17944; Mature: 17813

Theoretical pI: Translated: 12.75; Mature: 12.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAAKKKPAAKAPAKKAAAKKAPAAKKAAAKKAAPAAKKAPAKKVAAKKAPAKKAAVKK
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
VAAKKAPAKKAAVKKVAAKKAPAKKAAVKKVAAKKAPAKKAAVKKVAAKKAPAAKKAAAK
HHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
PAAKKAAAKKAPAAKKAAAKPAAKKAPAKKAVAKPAAAPAAAPAAPAAKTALNPAAAWPF
HHHHHHHHHHCCHHHHHHHCCHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHCCCC
PTGNRP
CCCCCC
>Mature Secondary Structure 
ATAAKKKPAAKAPAKKAAAKKAPAAKKAAAKKAAPAAKKAPAKKVAAKKAPAKKAAVKK
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
VAAKKAPAKKAAVKKVAAKKAPAKKAAVKKVAAKKAPAKKAAVKKVAAKKAPAAKKAAAK
HHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
PAAKKAAAKKAPAAKKAAAKPAAKKAPAKKAVAKPAAAPAAAPAAPAAKTALNPAAAWPF
HHHHHHHHHHCCHHHHHHHCCHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHCCCC
PTGNRP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA