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The map label for this gene is 187930090

Identifier: 187930090

GI number: 187930090

Start: 3149736

End: 3150650

Strand: Reverse

Name: 187930090

Synonym: Rpic_3022

Alternate gene names: NA

Gene position: 3150650-3149736 (Counterclockwise)

Preceding gene: 187930091

Following gene: 187930089

Centisome position: 79.91

GC content: 65.9

Gene sequence:

>915_bases
ATGGCCGCCCTCGCAAACCGTCCGGACTGGTCCGGCAGCAGCACGCTCACCAAGGCGCTGGTGGTGTCGCTGGCCGTGCA
TGTTGTACTGCTGTTCGTGCGCGTGGTGGCCCCCGAGGCGTTCGATATCAAGCGCGACGATCCGGGCCTGGATGTGGTGC
TGGTCAACGCCAAGTCGTCGACGGCACCGTCCAAGGCGACGGCCGTGGCCCAGGTCAACCTGAACGGCGGTGGCGAATAT
GACCAGCAGCGCGCCACCACGCCGCTGCCCGCTGACACCAATGAGCAGACCGGCGACGCCATCAAGCTCACACAGCGCCG
CGTTGAGTATCTCGAGCAAGAGCAGCGCCGCCTGCTGACGCAATCGACCGAGCGCGCGCCGCTGGTCAACGATCGTCAGG
TCAAGCCCGGCGAGCGTCCGCAGCCGTCGCCCACCAACGGCACCGACGACCGCACCACGCAAGACGAAATCGCCCGGCTG
CAGGCCGAGATCGACCGGAATCTCGAGAACTACGCCAAGCGCCCGCGCCGCAATGTGCTGACAGCCGCCAGCGCCCGCCA
GGTGGATTACGCCCGCTACTACGATGCCGTGCGGCGCAAGATCGAAGCCCGCGGCACCGCAAACTTTCCCAGCCAGAACG
GCCGCCCGCTGTATGGCGAGCTGATCGTCGTGATCAGCATCAACCGCGAAGGCCAGCTCGGCTATAACCAGGACGGCTAC
AAGATCGAAGGCATCGAGATCGCAAAGAGCTCGGGCAACCCCGCGCTGGATCGCCAGGCCGTGGCCATCGTGCGTTCGTC
TTCACCGTTTGGCGCCTTCCCGGCCGAGATGCGCAAGCGCGTCGACATCCAGGATGTGGTCGCCACGTTCAAGTTCACCC
GCGCAGGCTTGGAAACCCACCTGCAGACCCGTTGA

Upstream 100 bases:

>100_bases
CCGCCGCCGCAAGACGGCGAGAGCGGTGGAACGCCTGCCGCTGCCTAACTACAATCGCAGCCTGACCTTCATTCTTCGCG
CATCGACCAGGAATCGCCCC

Downstream 100 bases:

>100_bases
TTTCGTCGTCCATGCCGTCGTCGTTTCAAGAGGCCATCCTCGCCGCCGCGAGCGCGCCGCCCACAGATCGCTATGGCGTG
ATCGGCAACCCGATCGCGCA

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like Protein; NB Family C-Terminal Domain Protein; NB Protein; NB-Like; NB C-Terminal; NB Domain-Containing Protein; Periplasmic Protein nB Links Inner And Outer Membranes; NB-Related Transmembrane Protein; Nb Family Protein; NB Domain Protein; NB-Like Domain-Containing Protein; Periplasmic Protein/ Biopolymer Transport; NB Family C-Terminal Domain-Containing; Nb Protein

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MAALANRPDWSGSSTLTKALVVSLAVHVVLLFVRVVAPEAFDIKRDDPGLDVVLVNAKSSTAPSKATAVAQVNLNGGGEY
DQQRATTPLPADTNEQTGDAIKLTQRRVEYLEQEQRRLLTQSTERAPLVNDRQVKPGERPQPSPTNGTDDRTTQDEIARL
QAEIDRNLENYAKRPRRNVLTAASARQVDYARYYDAVRRKIEARGTANFPSQNGRPLYGELIVVISINREGQLGYNQDGY
KIEGIEIAKSSGNPALDRQAVAIVRSSSPFGAFPAEMRKRVDIQDVVATFKFTRAGLETHLQTR

Sequences:

>Translated_304_residues
MAALANRPDWSGSSTLTKALVVSLAVHVVLLFVRVVAPEAFDIKRDDPGLDVVLVNAKSSTAPSKATAVAQVNLNGGGEY
DQQRATTPLPADTNEQTGDAIKLTQRRVEYLEQEQRRLLTQSTERAPLVNDRQVKPGERPQPSPTNGTDDRTTQDEIARL
QAEIDRNLENYAKRPRRNVLTAASARQVDYARYYDAVRRKIEARGTANFPSQNGRPLYGELIVVISINREGQLGYNQDGY
KIEGIEIAKSSGNPALDRQAVAIVRSSSPFGAFPAEMRKRVDIQDVVATFKFTRAGLETHLQTR
>Mature_303_residues
AALANRPDWSGSSTLTKALVVSLAVHVVLLFVRVVAPEAFDIKRDDPGLDVVLVNAKSSTAPSKATAVAQVNLNGGGEYD
QQRATTPLPADTNEQTGDAIKLTQRRVEYLEQEQRRLLTQSTERAPLVNDRQVKPGERPQPSPTNGTDDRTTQDEIARLQ
AEIDRNLENYAKRPRRNVLTAASARQVDYARYYDAVRRKIEARGTANFPSQNGRPLYGELIVVISINREGQLGYNQDGYK
IEGIEIAKSSGNPALDRQAVAIVRSSSPFGAFPAEMRKRVDIQDVVATFKFTRAGLETHLQTR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33583; Mature: 33452

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALANRPDWSGSSTLTKALVVSLAVHVVLLFVRVVAPEAFDIKRDDPGLDVVLVNAKSS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
TAPSKATAVAQVNLNGGGEYDQQRATTPLPADTNEQTGDAIKLTQRRVEYLEQEQRRLLT
CCCCCEEEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QSTERAPLVNDRQVKPGERPQPSPTNGTDDRTTQDEIARLQAEIDRNLENYAKRPRRNVL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCHHHHHH
TAASARQVDYARYYDAVRRKIEARGTANFPSQNGRPLYGELIVVISINREGQLGYNQDGY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCE
KIEGIEIAKSSGNPALDRQAVAIVRSSSPFGAFPAEMRKRVDIQDVVATFKFTRAGLETH
EEEEEEEECCCCCCCCCHHEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
LQTR
CCCC
>Mature Secondary Structure 
AALANRPDWSGSSTLTKALVVSLAVHVVLLFVRVVAPEAFDIKRDDPGLDVVLVNAKSS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
TAPSKATAVAQVNLNGGGEYDQQRATTPLPADTNEQTGDAIKLTQRRVEYLEQEQRRLLT
CCCCCEEEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QSTERAPLVNDRQVKPGERPQPSPTNGTDDRTTQDEIARLQAEIDRNLENYAKRPRRNVL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCHHHHHH
TAASARQVDYARYYDAVRRKIEARGTANFPSQNGRPLYGELIVVISINREGQLGYNQDGY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCE
KIEGIEIAKSSGNPALDRQAVAIVRSSSPFGAFPAEMRKRVDIQDVVATFKFTRAGLETH
EEEEEEEECCCCCCCCCHHEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
LQTR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA