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The map label for this gene is dgoA [H]

Identifier: 187930059

GI number: 187930059

Start: 3118717

End: 3119343

Strand: Reverse

Name: dgoA [H]

Synonym: Rpic_2991

Alternate gene names: 187930059

Gene position: 3119343-3118717 (Counterclockwise)

Preceding gene: 187930060

Following gene: 187930058

Centisome position: 79.12

GC content: 70.65

Gene sequence:

>627_bases
ATGACCTGGACAACCCACCTTCCGCTGATCGCCATCCTGCGCGGCATCCGGCCTGACGAGGTGCTCGCGCACACGCAGGC
GCTGGTCGATGCGGGTTTCGATGCCATCGAGATTCCGCTCAACTCGCCCGACTGGGCGCAGAGCGTGCAACTTGCCGCGC
GCGCCTTCGGTGACCGCGCCTTGATCGGCGCAGGCACCGTGCTGCGCCCCGAAGACGTTGACCTGATGGTTGCGGCGGGC
GGCAAGCTGGTCATCACGCCCAACACGCATGCGCCTGTGATCCGCGCCGCCGCACAGGCCGGGCTCGTCACCTGCATCGG
CTGCATGACCGCCACCGAGGCTTTTGCCGCGCTCGACGCGGGCGCGCAGGCGCTGAAGATCTTCCCGGCCGGCGCGATCG
GCCCGGGCTACGTGCGCGCGCTCAAGGCCGTGCTGCCCGCCGAGGTGCCGGTGTTTGCCGTCGGTGGCATCACGCCGGAG
AACCTCGCCGATTACCTTGCCGCCGGCTGCATCGGCGCAGGCCTCGGCAGCGACCTGTATCGCCCGGGCCAGCCCGTCGA
GCGCACCGCCGAACGCGCGCGCGCCTTCGTCACCGCCTACCGCAGCGCCCAATCCGACCGCACTTGA

Upstream 100 bases:

>100_bases
AGGTGGCCTACACCGCGCTGTTCCTCGCTTCCGACGAGGCGCGTTTCATCAACGCGACCGACATCCTCATCGATGGCGGC
CGCTCGCAGCTCTATCAGGA

Downstream 100 bases:

>100_bases
ACGCACCATCGATTCGATCCATGAAAATCACCCGCCTGACCACGTACCGCCTGCCGCCGCGCTGGATGTTCCTGAAAGTC
GAGACCGACGAGGGCGTCAC

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTWTTHLPLIAILRGIRPDEVLAHTQALVDAGFDAIEIPLNSPDWAQSVQLAARAFGDRALIGAGTVLRPEDVDLMVAAG
GKLVITPNTHAPVIRAAAQAGLVTCIGCMTATEAFAALDAGAQALKIFPAGAIGPGYVRALKAVLPAEVPVFAVGGITPE
NLADYLAAGCIGAGLGSDLYRPGQPVERTAERARAFVTAYRSAQSDRT

Sequences:

>Translated_208_residues
MTWTTHLPLIAILRGIRPDEVLAHTQALVDAGFDAIEIPLNSPDWAQSVQLAARAFGDRALIGAGTVLRPEDVDLMVAAG
GKLVITPNTHAPVIRAAAQAGLVTCIGCMTATEAFAALDAGAQALKIFPAGAIGPGYVRALKAVLPAEVPVFAVGGITPE
NLADYLAAGCIGAGLGSDLYRPGQPVERTAERARAFVTAYRSAQSDRT
>Mature_207_residues
TWTTHLPLIAILRGIRPDEVLAHTQALVDAGFDAIEIPLNSPDWAQSVQLAARAFGDRALIGAGTVLRPEDVDLMVAAGG
KLVITPNTHAPVIRAAAQAGLVTCIGCMTATEAFAALDAGAQALKIFPAGAIGPGYVRALKAVLPAEVPVFAVGGITPEN
LADYLAAGCIGAGLGSDLYRPGQPVERTAERARAFVTAYRSAQSDRT

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=203, Percent_Identity=66.5024630541872, Blast_Score=280, Evalue=4e-77,
Organism=Escherichia coli, GI1788156, Length=152, Percent_Identity=32.8947368421053, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 21509; Mature: 21378

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWTTHLPLIAILRGIRPDEVLAHTQALVDAGFDAIEIPLNSPDWAQSVQLAARAFGDRA
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCE
LIGAGTVLRPEDVDLMVAAGGKLVITPNTHAPVIRAAAQAGLVTCIGCMTATEAFAALDA
EECCCCEECCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAQALKIFPAGAIGPGYVRALKAVLPAEVPVFAVGGITPENLADYLAAGCIGAGLGSDLY
CCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
RPGQPVERTAERARAFVTAYRSAQSDRT
CCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TWTTHLPLIAILRGIRPDEVLAHTQALVDAGFDAIEIPLNSPDWAQSVQLAARAFGDRA
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCE
LIGAGTVLRPEDVDLMVAAGGKLVITPNTHAPVIRAAAQAGLVTCIGCMTATEAFAALDA
EECCCCEECCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAQALKIFPAGAIGPGYVRALKAVLPAEVPVFAVGGITPENLADYLAAGCIGAGLGSDLY
CCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
RPGQPVERTAERARAFVTAYRSAQSDRT
CCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]