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The map label for this gene is yphA [H]

Identifier: 187929833

GI number: 187929833

Start: 2876179

End: 2876589

Strand: Reverse

Name: yphA [H]

Synonym: Rpic_2764

Alternate gene names: 187929833

Gene position: 2876589-2876179 (Counterclockwise)

Preceding gene: 187929834

Following gene: 187929830

Centisome position: 72.96

GC content: 62.29

Gene sequence:

>411_bases
ATGGACGCGTTCATCGAACGTTGGCGCAACGAACTAATGCTGCTCGCCCGCATCCTCATGATGGTGCTGTTCGTGATGTC
CGGGTGGGGCAAGCTGACGGGCTTTCAGGGCACCGTCGGCTACATGGCCAGCACGGGCGCGCCCATGCCGATGGTGGCCG
CAGCGGTTGCCGTCGTCATGGAGTTTGGCGTGGGTATCGCCTTGCTGATCGGTTTCTGGACGCGGCCGCTGGCGCTGCTG
ATGGCGTTGTTCGTGCTGGGCACTTCGTTCATCGCCCACAGCTACTGGAGTATGGAAGGCTCCATGGAGGCCGCCAACAA
GATCCAGTTCTACAAGAACCTGAGCATCATGGGCGGGCTGTTCCTGCTGGCAGCGGTGGGGCCGGGCAAGTACGCGGTGC
AGAAGTCGTAG

Upstream 100 bases:

>100_bases
GGCACGGTGTGATTCAGGCGGTACTCGATGCGCTCGAAACCACACTTGGTAAATCCAGCGCCTAGACTGCAATCACCAAA
GCCCGCCCTGGAGGCCCAAA

Downstream 100 bases:

>100_bases
TGCGCGCTCAGCGCAACGACCGCTGCACCAGCACCAGCACGGCAAACACGCCGCACGCCACGGCAAACCAGCTGAAGAGC
TGCGTGCCGGCCAGCAGCGT

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MDAFIERWRNELMLLARILMMVLFVMSGWGKLTGFQGTVGYMASTGAPMPMVAAAVAVVMEFGVGIALLIGFWTRPLALL
MALFVLGTSFIAHSYWSMEGSMEAANKIQFYKNLSIMGGLFLLAAVGPGKYAVQKS

Sequences:

>Translated_136_residues
MDAFIERWRNELMLLARILMMVLFVMSGWGKLTGFQGTVGYMASTGAPMPMVAAAVAVVMEFGVGIALLIGFWTRPLALL
MALFVLGTSFIAHSYWSMEGSMEAANKIQFYKNLSIMGGLFLLAAVGPGKYAVQKS
>Mature_136_residues
MDAFIERWRNELMLLARILMMVLFVMSGWGKLTGFQGTVGYMASTGAPMPMVAAAVAVVMEFGVGIALLIGFWTRPLALL
MALFVLGTSFIAHSYWSMEGSMEAANKIQFYKNLSIMGGLFLLAAVGPGKYAVQKS

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=127, Percent_Identity=49.6062992125984, Blast_Score=129, Evalue=6e-32,
Organism=Escherichia coli, GI87082210, Length=134, Percent_Identity=42.5373134328358, Blast_Score=102, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14797; Mature: 14797

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.6 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
9.6 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAFIERWRNELMLLARILMMVLFVMSGWGKLTGFQGTVGYMASTGAPMPMVAAAVAVVM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH
EFGVGIALLIGFWTRPLALLMALFVLGTSFIAHSYWSMEGSMEAANKIQFYKNLSIMGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FLLAAVGPGKYAVQKS
HHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDAFIERWRNELMLLARILMMVLFVMSGWGKLTGFQGTVGYMASTGAPMPMVAAAVAVVM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH
EFGVGIALLIGFWTRPLALLMALFVLGTSFIAHSYWSMEGSMEAANKIQFYKNLSIMGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FLLAAVGPGKYAVQKS
HHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]