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The map label for this gene is yaaD [H]

Identifier: 187929781

GI number: 187929781

Start: 2825381

End: 2825869

Strand: Reverse

Name: yaaD [H]

Synonym: Rpic_2711

Alternate gene names: 187929781

Gene position: 2825869-2825381 (Counterclockwise)

Preceding gene: 187929786

Following gene: 187929780

Centisome position: 71.68

GC content: 63.19

Gene sequence:

>489_bases
GTGCAAAATTTGGTGAACGAGGCGTCCGCGGCGACGCCAAGCGGCACAGGCAAGGTGGTTGGCCCGGATTCCTTTCTGAC
GCTGCACTACCGCATCGCGCTGGAAAACGACACCGACATCGTTACCACCTTCGACGACAAACCGGCCACGCTGCTGCTCG
GCCAGGGCCAGATGGCGCCCACGCTGGAGCAGGCGCTGCTTGGTATGCGCGAGGGCGAGCGCACGACGTTCCGGCTGGCA
CCGGAGCATGCGTTCGGCCCACGCAATCCGGAACTGCTGCAGCGCGTGTCGCTGGCCACGCTGCGGGAGAACTCCTCGTT
CGAAGAGGATTACCAGCCGGGCGACCTGGTTGAGTTCAATGCGCCGAGCGGCGGCAAATATGCCGGTGTGCTCAAGGAAG
TGGGCGAGACCTCGGCATTGTTTGACTTCAACCACCCGCTGGCCGGTCAGACGATCGTGTTTGAAGTCCAGCTGATCGGC
ATCCTCTGA

Upstream 100 bases:

>100_bases
GAAAGGCCCTGCCAGCGGGAGTGCGGCGCGCGTCGCGCCTGCGGCAGCGCGGAGGGCTGACGTACAATAACGGGTTACTT
TTTGGTCAAGCAGGTTGAGC

Downstream 100 bases:

>100_bases
TATGAGCAACGCTGTGAACGCCCCGCTCGATCCCATTGATCCTGTCACCCAGGCCGACGCCGAGGTCTTGCTGGCGCAGC
CGCGCGGCTTCTGCGCCGGC

Product: FKBP-type peptidylprolyl isomerase

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQNLVNEASAATPSGTGKVVGPDSFLTLHYRIALENDTDIVTTFDDKPATLLLGQGQMAPTLEQALLGMREGERTTFRLA
PEHAFGPRNPELLQRVSLATLRENSSFEEDYQPGDLVEFNAPSGGKYAGVLKEVGETSALFDFNHPLAGQTIVFEVQLIG
IL

Sequences:

>Translated_162_residues
MQNLVNEASAATPSGTGKVVGPDSFLTLHYRIALENDTDIVTTFDDKPATLLLGQGQMAPTLEQALLGMREGERTTFRLA
PEHAFGPRNPELLQRVSLATLRENSSFEEDYQPGDLVEFNAPSGGKYAGVLKEVGETSALFDFNHPLAGQTIVFEVQLIG
IL
>Mature_162_residues
MQNLVNEASAATPSGTGKVVGPDSFLTLHYRIALENDTDIVTTFDDKPATLLLGQGQMAPTLEQALLGMREGERTTFRLA
PEHAFGPRNPELLQRVSLATLRENSSFEEDYQPGDLVEFNAPSGGKYAGVLKEVGETSALFDFNHPLAGQTIVFEVQLIG
IL

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=145, Percent_Identity=35.8620689655172, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 17562; Mature: 17562

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLVNEASAATPSGTGKVVGPDSFLTLHYRIALENDTDIVTTFDDKPATLLLGQGQMAP
CCCHHHHHHCCCCCCCCEEECCCCEEEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCH
TLEQALLGMREGERTTFRLAPEHAFGPRNPELLQRVSLATLRENSSFEEDYQPGDLVEFN
HHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
APSGGKYAGVLKEVGETSALFDFNHPLAGQTIVFEVQLIGIL
CCCCCCHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MQNLVNEASAATPSGTGKVVGPDSFLTLHYRIALENDTDIVTTFDDKPATLLLGQGQMAP
CCCHHHHHHCCCCCCCCEEECCCCEEEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCH
TLEQALLGMREGERTTFRLAPEHAFGPRNPELLQRVSLATLRENSSFEEDYQPGDLVEFN
HHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
APSGGKYAGVLKEVGETSALFDFNHPLAGQTIVFEVQLIGIL
CCCCCCHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]