| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yicG [C]
Identifier: 187929597
GI number: 187929597
Start: 2637443
End: 2638072
Strand: Reverse
Name: yicG [C]
Synonym: Rpic_2523
Alternate gene names: 187929597
Gene position: 2638072-2637443 (Counterclockwise)
Preceding gene: 187929598
Following gene: 187929595
Centisome position: 66.91
GC content: 64.13
Gene sequence:
>630_bases ATGATGGAGCACAACCTCTTTGTCCTGGTCGACTTGCTGGGCACCCTCGCCTTCGCGGTCAGTGGTGCCCTCGCAGCCGA ACAGAAGCGGCTCGACCTGTTTGGCGTTCTTGCGATCAGCTATCTGACGGCGTGCGGCGGCGGCGTGATTCGAGACCTGT GTATCGGTGCACTGCCGCCGGTGGGCATTTCGGACTGGCGCTACCTCGCCACCTCAGCGCTCGCGTCAGCGATTGCGATC TGGGCACGCCCCATGATTGACCACCTCAAACAGCCGATCATCTTTTTCGATTCGCTCGGGCTGGGCTTCTTTGCCGTCGT CGGGGCGCATAAGGCGTTGGGGTTCGGCCACAACATTGAGGTGGCCATCCTTCTCGGCATGGTGACGGCCGTCGGCGGCG GCGTGGCACGGGACGTGGTGCTCAACCGCGTGCCGATCATCCTCGAGAAGGAAATCTACGCCGTGGCAGCGCTGGTCGGG GCGGCCATCCAGGTGCTTGGACAGCGCATGGACTGGACGCTCACGCTCACGCCGTGGTTTGGCGCCTTAATCTGCTTTGC TATCCGCACCCTCGCGCTGCACTACTCCTGGGGGCTGCCGGTGATCCGGCGCAGCGACGCCGCGCAGTGA
Upstream 100 bases:
>100_bases ATTCACCCAAGTTCGCACCGGTCATTCATCCGACGCTGGAAACCGGCCTGCACGCGATGCTCACGGCGGCCTCGGCATGG CTTTGCACTTCTCCGGCAAC
Downstream 100 bases:
>100_bases TTGGGCTGGGCAGCGACGGGCTGTACGTACGCAGTCAGTGATTTCACCGCCGTGGGCGACGCCCCAAACTCGGACCAAAC CGCGCGATCCGTTTCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MMEHNLFVLVDLLGTLAFAVSGALAAEQKRLDLFGVLAISYLTACGGGVIRDLCIGALPPVGISDWRYLATSALASAIAI WARPMIDHLKQPIIFFDSLGLGFFAVVGAHKALGFGHNIEVAILLGMVTAVGGGVARDVVLNRVPIILEKEIYAVAALVG AAIQVLGQRMDWTLTLTPWFGALICFAIRTLALHYSWGLPVIRRSDAAQ
Sequences:
>Translated_209_residues MMEHNLFVLVDLLGTLAFAVSGALAAEQKRLDLFGVLAISYLTACGGGVIRDLCIGALPPVGISDWRYLATSALASAIAI WARPMIDHLKQPIIFFDSLGLGFFAVVGAHKALGFGHNIEVAILLGMVTAVGGGVARDVVLNRVPIILEKEIYAVAALVG AAIQVLGQRMDWTLTLTPWFGALICFAIRTLALHYSWGLPVIRRSDAAQ >Mature_209_residues MMEHNLFVLVDLLGTLAFAVSGALAAEQKRLDLFGVLAISYLTACGGGVIRDLCIGALPPVGISDWRYLATSALASAIAI WARPMIDHLKQPIIFFDSLGLGFFAVVGAHKALGFGHNIEVAILLGMVTAVGGGVARDVVLNRVPIILEKEIYAVAALVG AAIQVLGQRMDWTLTLTPWFGALICFAIRTLALHYSWGLPVIRRSDAAQ
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=169, Percent_Identity=34.9112426035503, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1786352, Length=193, Percent_Identity=32.1243523316062, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22295; Mature: 22295
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEHNLFVLVDLLGTLAFAVSGALAAEQKRLDLFGVLAISYLTACGGGVIRDLCIGALPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC VGISDWRYLATSALASAIAIWARPMIDHLKQPIIFFDSLGLGFFAVVGAHKALGFGHNIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHH VAILLGMVTAVGGGVARDVVLNRVPIILEKEIYAVAALVGAAIQVLGQRMDWTLTLTPWF HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHH GALICFAIRTLALHYSWGLPVIRRSDAAQ HHHHHHHHHHHHHHHHCCCCEECCCCCCC >Mature Secondary Structure MMEHNLFVLVDLLGTLAFAVSGALAAEQKRLDLFGVLAISYLTACGGGVIRDLCIGALPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC VGISDWRYLATSALASAIAIWARPMIDHLKQPIIFFDSLGLGFFAVVGAHKALGFGHNIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHH VAILLGMVTAVGGGVARDVVLNRVPIILEKEIYAVAALVGAAIQVLGQRMDWTLTLTPWF HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHH GALICFAIRTLALHYSWGLPVIRRSDAAQ HHHHHHHHHHHHHHHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]