BacMap

Definition	Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession	NC_010682
Length	3,942,557

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The map label for this gene is livG [H]

Identifier: 187929530

GI number: 187929530

Start: 2561929

End: 2562702

Strand: Reverse

Name: livG [H]

Synonym: Rpic_2451

Alternate gene names: 187929530

Gene position: 2562702-2561929 (Counterclockwise)

Preceding gene: 187929531

Following gene: 187929529

Centisome position: 65.0

GC content: 64.73

Gene sequence:

>774_bases
ATGACTGCGCCCACGATCCATCCTCCGCCCACATTGAGCACGCGTGGCCTGTCCAGGCGCTGGGGCGGCTTTCACGCCAA
TTCCGATATCTCGCTGTCTTTTGCGCCCGGCGCGCGCCACGCGCTGATCGGGCCGAACGGCGCGGGCAAGACCACCTTCA
TCAATCTGCTCACCGGCACGCTCGCACCCACTGCGGGCCAAGTGCTGCTGGATGATGAAGACATCACCCGCCTGCCCGCA
CACCAGCGCGTCAAGCGCGGCATCACGCGCACTTTCCAGATCAACACGTTGTTTCCCGTATTGACGGTGCTGGAATCGGT
GATGCTCGCCATCTTCGAGCGCACGGGCGCGTCGTGGCATTGGCATCGCACCGTTGCATCGCATAAGGACGCCCGCGACG
AAGCGATGGCATTGCTATGCCGCTTGCAACTCGGTGCCGACGCGCTGGCGCCCACGCATGCGTTGCCTTACGGCAAACAG
CGCCTGGTGGAGATCGCCCTGGCGCTCGCGACGCACCCACGCATCCTGCTTCTCGACGAGCCTGCCGCCGGTATCCCGAG
CAGAGAAAGCACCGAACTGTTCGAGGTCATCGCCAGCCTGCCGCGCGACATCACGATCCTCTTCATCGAGCACGACATGA
ACCTTGTCTTCCGCTTTGCCGAGCGGATCACCGTGCTGCTGGCCGGCCGCGTGCTGACTGAAGGCACGCCGCAGGAGATC
GCGGCCGACCCGCGTGTGCGCGAGGTCTACCTCGGGGAGGTTGAGCATGCGTGA

Upstream 100 bases:

>100_bases
TGATGGTGATCGTGTTGTTTGCGCGGGGTGGCATTCTCGGTGGGCTGGAAACTGCGGTGTCTGCGGTCAGGGCGCGGCGC
GCTCGCAAGGGAGGTGCTTC

Downstream 100 bases:

>100_bases
ACTGTTGTCGCTCGAAAATGTGACCGCCGGCTACGGCAATGCTGTCGTGCTGGACGATGTGTCGTTCGCGCTCGAAGCAG
GCGGCAGCCTTGCGCTGCTG

Product: ABC transporter-like protein

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein G [H]

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTAPTIHPPPTLSTRGLSRRWGGFHANSDISLSFAPGARHALIGPNGAGKTTFINLLTGTLAPTAGQVLLDDEDITRLPA
HQRVKRGITRTFQINTLFPVLTVLESVMLAIFERTGASWHWHRTVASHKDARDEAMALLCRLQLGADALAPTHALPYGKQ
RLVEIALALATHPRILLLDEPAAGIPSRESTELFEVIASLPRDITILFIEHDMNLVFRFAERITVLLAGRVLTEGTPQEI
AADPRVREVYLGEVEHA

Sequences:

>Translated_257_residues
MTAPTIHPPPTLSTRGLSRRWGGFHANSDISLSFAPGARHALIGPNGAGKTTFINLLTGTLAPTAGQVLLDDEDITRLPA
HQRVKRGITRTFQINTLFPVLTVLESVMLAIFERTGASWHWHRTVASHKDARDEAMALLCRLQLGADALAPTHALPYGKQ
RLVEIALALATHPRILLLDEPAAGIPSRESTELFEVIASLPRDITILFIEHDMNLVFRFAERITVLLAGRVLTEGTPQEI
AADPRVREVYLGEVEHA
>Mature_256_residues
TAPTIHPPPTLSTRGLSRRWGGFHANSDISLSFAPGARHALIGPNGAGKTTFINLLTGTLAPTAGQVLLDDEDITRLPAH
QRVKRGITRTFQINTLFPVLTVLESVMLAIFERTGASWHWHRTVASHKDARDEAMALLCRLQLGADALAPTHALPYGKQR
LVEIALALATHPRILLLDEPAAGIPSRESTELFEVIASLPRDITILFIEHDMNLVFRFAERITVLLAGRVLTEGTPQEIA
ADPRVREVYLGEVEHA

Specific function: Component of the leucine-specific transport system [H]

COG id: COG0411

COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=229, Percent_Identity=27.5109170305677, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI27881501, Length=242, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI30795238, Length=242, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI105990541, Length=209, Percent_Identity=30.622009569378, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI21536376, Length=210, Percent_Identity=29.0476190476191, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI150417984, Length=231, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI27262624, Length=219, Percent_Identity=29.2237442922374, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI27262626, Length=219, Percent_Identity=29.2237442922374, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI47078218, Length=227, Percent_Identity=27.3127753303965, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI45446740, Length=227, Percent_Identity=27.3127753303965, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI27436953, Length=217, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI153792144, Length=238, Percent_Identity=23.5294117647059, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI116734710, Length=208, Percent_Identity=25.4807692307692, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI171184400, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI156105685, Length=220, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI27477115, Length=202, Percent_Identity=26.7326732673267, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789864, Length=251, Percent_Identity=42.6294820717131, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1788210, Length=240, Percent_Identity=32.5, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787370, Length=249, Percent_Identity=31.3253012048193, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1789593, Length=245, Percent_Identity=33.0612244897959, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI87081791, Length=240, Percent_Identity=30.4166666666667, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1790525, Length=239, Percent_Identity=27.1966527196653, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789672, Length=252, Percent_Identity=28.1746031746032, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87081709, Length=235, Percent_Identity=29.3617021276596, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87082268, Length=244, Percent_Identity=28.6885245901639, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788472, Length=220, Percent_Identity=27.7272727272727, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=30.2222222222222, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1787029, Length=232, Percent_Identity=27.1551724137931, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1790739, Length=246, Percent_Identity=28.8617886178862, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789032, Length=222, Percent_Identity=31.5315315315315, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI48995001, Length=219, Percent_Identity=28.310502283105, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787792, Length=251, Percent_Identity=27.8884462151394, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788761, Length=250, Percent_Identity=28.8, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789991, Length=225, Percent_Identity=27.1111111111111, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787712, Length=231, Percent_Identity=26.8398268398268, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786803, Length=236, Percent_Identity=28.3898305084746, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788225, Length=241, Percent_Identity=26.9709543568465, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786398, Length=226, Percent_Identity=27.8761061946903, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081782, Length=250, Percent_Identity=24.8, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786872, Length=242, Percent_Identity=26.8595041322314, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1786253, Length=236, Percent_Identity=28.3898305084746, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788450, Length=223, Percent_Identity=29.1479820627803, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790467, Length=242, Percent_Identity=24.7933884297521, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788897, Length=234, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788165, Length=235, Percent_Identity=27.6595744680851, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786345, Length=256, Percent_Identity=26.953125, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790162, Length=254, Percent_Identity=25.1968503937008, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1787089, Length=231, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994943, Length=231, Percent_Identity=27.7056277056277, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=25.6637168141593, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789873, Length=211, Percent_Identity=29.8578199052133, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1787548, Length=230, Percent_Identity=27.3913043478261, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789586, Length=251, Percent_Identity=29.8804780876494, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789962, Length=226, Percent_Identity=24.3362831858407, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI48994997, Length=241, Percent_Identity=24.0663900414938, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787759, Length=256, Percent_Identity=26.953125, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788644, Length=249, Percent_Identity=26.1044176706827, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787758, Length=224, Percent_Identity=24.1071428571429, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI145693107, Length=241, Percent_Identity=26.9709543568465, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790544, Length=228, Percent_Identity=25.8771929824561, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=236, Percent_Identity=28.3898305084746, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082267, Length=238, Percent_Identity=23.9495798319328, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786703, Length=210, Percent_Identity=27.6190476190476, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI48994883, Length=237, Percent_Identity=24.4725738396624, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787500, Length=228, Percent_Identity=24.1228070175439, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787112, Length=229, Percent_Identity=26.6375545851528, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1789963, Length=254, Percent_Identity=26.7716535433071, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786319, Length=165, Percent_Identity=29.6969696969697, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788506, Length=227, Percent_Identity=25.9911894273128, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786654, Length=224, Percent_Identity=28.125, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=219, Percent_Identity=31.0502283105023, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17565938, Length=213, Percent_Identity=29.1079812206573, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71983516, Length=226, Percent_Identity=27.4336283185841, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=226, Percent_Identity=27.4336283185841, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=226, Percent_Identity=27.4336283185841, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=215, Percent_Identity=27.4418604651163, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=221, Percent_Identity=26.6968325791855, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=216, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=225, Percent_Identity=28.4444444444444, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17551700, Length=227, Percent_Identity=26.8722466960352, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551702, Length=227, Percent_Identity=26.8722466960352, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324498, Length=241, Percent_Identity=26.1410788381743, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007184, Length=220, Percent_Identity=28.6363636363636, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI221500365, Length=220, Percent_Identity=28.6363636363636, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI221512771, Length=220, Percent_Identity=28.1818181818182, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24666092, Length=236, Percent_Identity=26.6949152542373, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24581191, Length=213, Percent_Identity=26.7605633802817, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24581189, Length=213, Percent_Identity=26.7605633802817, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24581193, Length=213, Percent_Identity=26.7605633802817, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24581195, Length=213, Percent_Identity=26.7605633802817, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24643674, Length=225, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28574533, Length=210, Percent_Identity=29.0476190476191, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571209, Length=212, Percent_Identity=26.8867924528302, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573571, Length=234, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI85724858, Length=206, Percent_Identity=30.0970873786408, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI85724856, Length=206, Percent_Identity=30.0970873786408, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24580547, Length=206, Percent_Identity=30.0970873786408, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24580551, Length=206, Percent_Identity=30.0970873786408, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24580549, Length=206, Percent_Identity=30.0970873786408, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24580545, Length=206, Percent_Identity=30.0970873786408, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28573573, Length=217, Percent_Identity=28.110599078341, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19920532, Length=211, Percent_Identity=25.5924170616114, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24580930, Length=211, Percent_Identity=25.5924170616114, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648314, Length=225, Percent_Identity=26.2222222222222, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24659289, Length=211, Percent_Identity=27.4881516587678, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581407, Length=217, Percent_Identity=29.0322580645161, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28171; Mature: 28040

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPTIHPPPTLSTRGLSRRWGGFHANSDISLSFAPGARHALIGPNGAGKTTFINLLTGT
CCCCCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHH
LAPTAGQVLLDDEDITRLPAHQRVKRGITRTFQINTLFPVLTVLESVMLAIFERTGASWH
CCCCCCEEEECCCCCHHCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEE
WHRTVASHKDARDEAMALLCRLQLGADALAPTHALPYGKQRLVEIALALATHPRILLLDE
EHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC
PAAGIPSRESTELFEVIASLPRDITILFIEHDMNLVFRFAERITVLLAGRVLTEGTPQEI
CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AADPRVREVYLGEVEHA
CCCCCHHEEECCCCCCC
>Mature Secondary Structure 
TAPTIHPPPTLSTRGLSRRWGGFHANSDISLSFAPGARHALIGPNGAGKTTFINLLTGT
CCCCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHH
LAPTAGQVLLDDEDITRLPAHQRVKRGITRTFQINTLFPVLTVLESVMLAIFERTGASWH
CCCCCCEEEECCCCCHHCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEE
WHRTVASHKDARDEAMALLCRLQLGADALAPTHALPYGKQRLVEIALALATHPRILLLDE
EHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC
PAAGIPSRESTELFEVIASLPRDITILFIEHDMNLVFRFAERITVLLAGRVLTEGTPQEI
CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AADPRVREVYLGEVEHA
CCCCCHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]