Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187929478

Identifier: 187929478

GI number: 187929478

Start: 2493783

End: 2494625

Strand: Reverse

Name: 187929478

Synonym: Rpic_2399

Alternate gene names: NA

Gene position: 2494625-2493783 (Counterclockwise)

Preceding gene: 187929479

Following gene: 187929476

Centisome position: 63.27

GC content: 64.65

Gene sequence:

>843_bases
ATGGCAAGCTCTGAGTCGCCGCGTCGCATCGCCCTCATCGTTACGACGTATAACCGCCCGGACGCGCTGGTTCGCGTACT
GGCCGGCTGCAGCGCACAGACCGATCGCGCATTCGATGTCATCGTCGCCGACGACGGTTCGCGCGATGACACACGCTTTG
CCATCGAAGCCGCCGCCAAGACCGCGCCGTATCCGCTGCGCCATGTCTGGCATCCCGACGACGGCTTCCGTGCCGGTGAG
ATCCGCAACCGCGGCGTGCTGGCGACGGACGCCGACTACCTCGTTTTTCTCGATGGCGATTGCGTGCCGCGTCCGGATTT
TGTGGCGCGGCACCGCGCATTGGCCGAGCGGGGGCGCCTGCTGTCCGGCAGCCGCATCCTGCTGAATGAGGCGATGACGC
GCGAGGTCGTCGCCCAGCAGATCGACATCCACCTGAAGGATCGCGCGTATTGGTTTGCCGCCTGGCGCGCCGGCCGCGTC
AACAAATTCGTGCCGCTATTGGTGCCGGGCTTACCGGTGCCGCGTACCCTCAAGGACACCAGCCTGCGCGGCATCAAGAG
CTGCAACCTTGGCGTGTGGCGCAGCGATTTCGAGCGCGTGAACGGTTTCGATCAGAGCTTCGTCGGATGGGGCCATGAAG
ACGCCGATCTGGCGGTTCGCCTTTATAACGCCGGCGTGCGGCGCAAGCGCGGTTTTTGCGCGACCGAAGTCTTCCACCTA
TGGCATCGCGAGCAATCGCGCGAGCAGGAAAGCCCCAACTATCAACGCATGATGGCTCGGCGCAATACCGACATCATCCG
CGCAGACGTCGGGCTTGCAGAACTGCGAGAGCAGGGCGCCTGA

Upstream 100 bases:

>100_bases
CAGCGGGGTTTCCTCGATGGCGCCGAGGGCTTCATGCTGGCCGTGTCGAACGCCGAGGGCACGTATTACCGCTACGTCAA
GCTGATGATGCTGCATCGTT

Downstream 100 bases:

>100_bases
ACGAGCGCCGTCTGCTCACCAGGTCTTCTTCTGCTTAACGATGCCGAGAAACGGCCGCACGAAAATCTGATAGAGGAACT
TGCGCACGAAGATCTGGCGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Lipooligosaccharide Biosynthesis Glycosyltransferase; Two-Domain Glycosyltransferase; Lipooligosaccharide Glycosyltransferase; Two-Domain Glucosyltransferase; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Gt2F; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAKTAPYPLRHVWHPDDGFRAGE
IRNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRLLSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRV
NKFVPLLVPGLPVPRTLKDTSLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHL
WHREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA

Sequences:

>Translated_280_residues
MASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAKTAPYPLRHVWHPDDGFRAGE
IRNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRLLSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRV
NKFVPLLVPGLPVPRTLKDTSLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHL
WHREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA
>Mature_279_residues
ASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAKTAPYPLRHVWHPDDGFRAGEI
RNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRLLSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRVN
KFVPLLVPGLPVPRTLKDTSLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHLW
HREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31685; Mature: 31554

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAK
CCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEHHC
TAPYPLRHVWHPDDGFRAGEIRNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRL
CCCCCHHEEECCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCC
LSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRVNKFVPLLVPGLPVPRTLKDT
CCCCCHHHHHHHHHHHHHHHHCEEECCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCC
SLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHL
CCCCCCCCCCCCCHHHHHHHCCCCCHHCCCCCCCHHHEEEEECCCCHHCCCCHHHHHHHH
WHREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA
HHHHHHHHHCCCCHHHHHHHCCCCEEEECCCHHHHHHCCC
>Mature Secondary Structure 
ASSESPRRIALIVTTYNRPDALVRVLAGCSAQTDRAFDVIVADDGSRDDTRFAIEAAAK
CCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEHHC
TAPYPLRHVWHPDDGFRAGEIRNRGVLATDADYLVFLDGDCVPRPDFVARHRALAERGRL
CCCCCHHEEECCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCC
LSGSRILLNEAMTREVVAQQIDIHLKDRAYWFAAWRAGRVNKFVPLLVPGLPVPRTLKDT
CCCCCHHHHHHHHHHHHHHHHCEEECCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCC
SLRGIKSCNLGVWRSDFERVNGFDQSFVGWGHEDADLAVRLYNAGVRRKRGFCATEVFHL
CCCCCCCCCCCCCHHHHHHHCCCCCHHCCCCCCCHHHEEEEECCCCHHCCCCHHHHHHHH
WHREQSREQESPNYQRMMARRNTDIIRADVGLAELREQGA
HHHHHHHHHCCCCHHHHHHHCCCCEEEECCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA