Click here to switch to the map view.

The map label for this gene is 187929403

Identifier: 187929403

GI number: 187929403

Start: 2433685

End: 2434161

Strand: Reverse

Name: 187929403

Synonym: Rpic_2324

Alternate gene names: NA

Gene position: 2434161-2433685 (Counterclockwise)

Preceding gene: 187929404

Following gene: 187929402

Centisome position: 61.74

GC content: 60.38

Gene sequence:

>477_bases
ATGCCAAAAATCACGCTAAGCCTCCCGTACCCGATCAGCGCGAACCGCTACTGGGCTTCTCGCATCGTCAAGCCTAAGAG
CGGTCCGAGCTTCGTGAGCACGTATGTGACGCCCGAGGCGAAGGCTTACAAGGAACAGGTCGCTTGGCTTGCGAAGTCGG
CAGGCGTACGCGAACCGCTCGCCTGCCGTGTGCAGATCGACTACACGCTCTATCCGAAACGTCCTCAGGACTGGGAGCGA
CGTGTCGCAAAGGATCCGCTGCAGTGGGACAACACCGTGCAGTGCATCGATCTCGACAACGCCCAGAAGGTTCTGCTCGA
TGCACTCAAGGGCGTCGTCATTCAAGACGACGGCTGGCAGGTTCGTCGCATCCATGCCGAGCGCGGCGTTCCCGATGGTG
AGGCACGCATCGTGGTCACGGTAACGACGTTGCTTGAGGAATCCCCGCAGGCGACCTTGTTTTCGGAAGCGGCCTGA

Upstream 100 bases:

>100_bases
GCGCTGACGAAGTTCTGCGAGTGGACCGGCCCGCTGCCTGTCATCGGTACCGGATCGCCGGTGCGCAAGCGCGGCATTGC
CGAATACCTGTGAGGACGAC

Downstream 100 bases:

>100_bases
TTTCAGTGAGAAAGGAGGGTGAGATGGAATTCGTTGAGTTTCCCAAGATGGCGCGTCTGTCGCGGGAAGTGATTGTGACC
GAGAAGATCGACGGCACCAA

Product: endodeoxyribonuclease RusA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPKITLSLPYPISANRYWASRIVKPKSGPSFVSTYVTPEAKAYKEQVAWLAKSAGVREPLACRVQIDYTLYPKRPQDWER
RVAKDPLQWDNTVQCIDLDNAQKVLLDALKGVVIQDDGWQVRRIHAERGVPDGEARIVVTVTTLLEESPQATLFSEAA

Sequences:

>Translated_158_residues
MPKITLSLPYPISANRYWASRIVKPKSGPSFVSTYVTPEAKAYKEQVAWLAKSAGVREPLACRVQIDYTLYPKRPQDWER
RVAKDPLQWDNTVQCIDLDNAQKVLLDALKGVVIQDDGWQVRRIHAERGVPDGEARIVVTVTTLLEESPQATLFSEAA
>Mature_157_residues
PKITLSLPYPISANRYWASRIVKPKSGPSFVSTYVTPEAKAYKEQVAWLAKSAGVREPLACRVQIDYTLYPKRPQDWERR
VAKDPLQWDNTVQCIDLDNAQKVLLDALKGVVIQDDGWQVRRIHAERGVPDGEARIVVTVTTLLEESPQATLFSEAA

Specific function: Unknown

COG id: COG4570

COG function: function code L; Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17807; Mature: 17675

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKITLSLPYPISANRYWASRIVKPKSGPSFVSTYVTPEAKAYKEQVAWLAKSAGVREPL
CCEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCE
ACRVQIDYTLYPKRPQDWERRVAKDPLQWDNTVQCIDLDNAQKVLLDALKGVVIQDDGWQ
EEEEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCEEEECCCCE
VRRIHAERGVPDGEARIVVTVTTLLEESPQATLFSEAA
EEEEECCCCCCCCCCEEEEEEEHHHCCCCCCCEEECCC
>Mature Secondary Structure 
PKITLSLPYPISANRYWASRIVKPKSGPSFVSTYVTPEAKAYKEQVAWLAKSAGVREPL
CEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCE
ACRVQIDYTLYPKRPQDWERRVAKDPLQWDNTVQCIDLDNAQKVLLDALKGVVIQDDGWQ
EEEEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCEEEECCCCE
VRRIHAERGVPDGEARIVVTVTTLLEESPQATLFSEAA
EEEEECCCCCCCCCCEEEEEEEHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA