| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929351
Identifier: 187929351
GI number: 187929351
Start: 2391666
End: 2392499
Strand: Direct
Name: 187929351
Synonym: Rpic_2272
Alternate gene names: NA
Gene position: 2391666-2392499 (Clockwise)
Preceding gene: 187929347
Following gene: 187929357
Centisome position: 60.66
GC content: 66.31
Gene sequence:
>834_bases GTGACCCCCGCCGTTATCGCCCTGGTTCTCTGCGCCGCCCTGCTCCACGCCTCATGGAATGCATTGCTGAAAAGCGGCTC GGACCGCCTGCGCGCCATCACGCTGATGACACTGGCTTCAGGCGTGGCAGCACTACCGATGGCGATTGCATTGCCATTGC CCGCACCGGCCGCGTGGCCGTATGTGGCGCTATCCGCGGTGCTGCACGTCGGCTACAACGTGTTCCTCGCGCGCGCGTAT CGGTTTGGCGAGTTCGGGCAGGTGTACCCGATCGCGCGCGGGTCATCGCCGCTGCTGGTAACGGTGGGCGCCTCGCTCTT CGCGGGCGAAATGCCGGGCGTGATTACGCTCGCGGGCGTGGTGCTGGTGAGCGGCGGCATTCTCAGTCTGGCGCGCGGCC GCAAGGCCGACCTTGGCTCGACGCTGGCGGCGCTCACCACGGGCGTATTCATCGCGTGCTACACGGTGTGCGACGGCATC GGCGCAAGGGCAGCCGGCAATGCGAATGCGTACTCGGCATGGTTGTTCATGCTCGACGGACTGCCGATGGTGCTGCTCTA TCGCGTGTGGAAAGGCCCGTTGAACATCGACCTGCGCGACGCCAACACGCTCAAGACGTTTGGTGGCGGCGTAGTCTCGC TCATCGCCTACGGCATCGTCATCTGGGCTGTGACACTCGCGCCGATGGGGCCCGTGTCGGCCTTGCGCGAAACATCGGTG GTGTTTGCCGCGTTGCTCGGCCGGCTGTTCCTGAAGGAGTCGCTCACGGCGCGGCGCCTGTCGGCCTGCTCTGTCATCGC CTTCGGTGCTTACTGCCTGGGGCACCCGGCCTGA
Upstream 100 bases:
>100_bases ATCACACTTCCTGGGACTACGCTGGCGCCTTCTGGCTCTCGCCGACACTACATCGGGTGAGAAAAATCGACCCGATCCTC ACTTCGCGCACCACGTCATC
Downstream 100 bases:
>100_bases GCACAACGCTCAGGCGGTGCGCGGCGGATATTTGACTTCGAGGATGTCGATCTGCTCGACACCTGTGGGCGTGCGCAGCG GCACCGTATCGCCCACGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Inner Membrane Protein; Transporter DME Family DMT Superfamily; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; DMT Superfamily Permease; EmrE Membrane Transporter Of Cations And Cationic Drugs; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; Permease Protein; DMT Family Permease
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTPAVIALVLCAALLHASWNALLKSGSDRLRAITLMTLASGVAALPMAIALPLPAPAAWPYVALSAVLHVGYNVFLARAY RFGEFGQVYPIARGSSPLLVTVGASLFAGEMPGVITLAGVVLVSGGILSLARGRKADLGSTLAALTTGVFIACYTVCDGI GARAAGNANAYSAWLFMLDGLPMVLLYRVWKGPLNIDLRDANTLKTFGGGVVSLIAYGIVIWAVTLAPMGPVSALRETSV VFAALLGRLFLKESLTARRLSACSVIAFGAYCLGHPA
Sequences:
>Translated_277_residues MTPAVIALVLCAALLHASWNALLKSGSDRLRAITLMTLASGVAALPMAIALPLPAPAAWPYVALSAVLHVGYNVFLARAY RFGEFGQVYPIARGSSPLLVTVGASLFAGEMPGVITLAGVVLVSGGILSLARGRKADLGSTLAALTTGVFIACYTVCDGI GARAAGNANAYSAWLFMLDGLPMVLLYRVWKGPLNIDLRDANTLKTFGGGVVSLIAYGIVIWAVTLAPMGPVSALRETSV VFAALLGRLFLKESLTARRLSACSVIAFGAYCLGHPA >Mature_276_residues TPAVIALVLCAALLHASWNALLKSGSDRLRAITLMTLASGVAALPMAIALPLPAPAAWPYVALSAVLHVGYNVFLARAYR FGEFGQVYPIARGSSPLLVTVGASLFAGEMPGVITLAGVVLVSGGILSLARGRKADLGSTLAALTTGVFIACYTVCDGIG ARAAGNANAYSAWLFMLDGLPMVLLYRVWKGPLNIDLRDANTLKTFGGGVVSLIAYGIVIWAVTLAPMGPVSALRETSVV FAALLGRLFLKESLTARRLSACSVIAFGAYCLGHPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28706; Mature: 28575
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAVIALVLCAALLHASWNALLKSGSDRLRAITLMTLASGVAALPMAIALPLPAPAAWP CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH YVALSAVLHVGYNVFLARAYRFGEFGQVYPIARGSSPLLVTVGASLFAGEMPGVITLAGV HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCHHHHCCCCCHHHHHHH VLVSGGILSLARGRKADLGSTLAALTTGVFIACYTVCDGIGARAAGNANAYSAWLFMLDG HHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC LPMVLLYRVWKGPLNIDLRDANTLKTFGGGVVSLIAYGIVIWAVTLAPMGPVSALRETSV CHHHHHHHHHCCCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VFAALLGRLFLKESLTARRLSACSVIAFGAYCLGHPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPAVIALVLCAALLHASWNALLKSGSDRLRAITLMTLASGVAALPMAIALPLPAPAAWP CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH YVALSAVLHVGYNVFLARAYRFGEFGQVYPIARGSSPLLVTVGASLFAGEMPGVITLAGV HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCHHHHCCCCCHHHHHHH VLVSGGILSLARGRKADLGSTLAALTTGVFIACYTVCDGIGARAAGNANAYSAWLFMLDG HHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC LPMVLLYRVWKGPLNIDLRDANTLKTFGGGVVSLIAYGIVIWAVTLAPMGPVSALRETSV CHHHHHHHHHCCCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VFAALLGRLFLKESLTARRLSACSVIAFGAYCLGHPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA