| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is guaD [H]
Identifier: 187929329
GI number: 187929329
Start: 2362004
End: 2363338
Strand: Direct
Name: guaD [H]
Synonym: Rpic_2250
Alternate gene names: 187929329
Gene position: 2362004-2363338 (Clockwise)
Preceding gene: 187929328
Following gene: 187929330
Centisome position: 59.91
GC content: 65.92
Gene sequence:
>1335_bases ATGACCACGATGCCTCCGACTTCCAACACCGTTCACGCCTACCGCGGCCGCGTGCTGCATTTCCTGCACGATCCGCAGTA TCGCGAGCGCGATGCCTATGAGTACTGGGAAGACGGCCTGCTCGTGGTCTTGGGCGGCAAGGTGATCAAGGCCGGCGACT ATGCCGCGCTACGTGAAGACCTGCCGGCCGGCGCGCAATTGCACGACTACAGCGGCAAGCTGATCGTCCCGGGCTTCATC GACACTCATATCCACTTCCCCCAGACGGACATCATCGCGTCGCCGTCGCCGGGTCTGCTGCATTGGCTGGAGACGTACAC CTTCCCGGAAGAGCGCCGCTTCGAAAGCGAGCAGTACGCCGCCGGCGTCGCCTCGTTCTTCCTCGACGAACTGCTGCGCA ACGGCACGACCAGCGCGATGGTGTGGAGCACCGTGCATCGCGGGTCTGCCGAGACGCTGTTCACGCAAGCCCAGCAACGC GGCATGCGCATGATCACGGGCAAGGTGATGATGGACCGCAACTGCCCGGAATACCTGCGCGACACGGCGGAATCCGGCGC GCGCGACACGGCTGACCTGATCTCGCGCTGGCACGGCAAGGACCGCCTGGCTTACGCCATCACGCCGCGATTCGCGCCCA CGTCGAGCGAAGCCCAGCTGCAGGCCTGCGCCGAACTCGCCAAGCAATACAAGGACGTCTTCATCCAGACGCACGTCGCC GAGAACCCCGACGAAGTGAAATGGGTGGCTGACCTGTTCCCAGACGCGCGCAGCTATCTGGACGTCTACGACCGCTACGG CCTGCTGCGCAAAGGCGCCTTTTACGGCCACGCCATCTGGCTGGACGACGGTGACCGCCAGCGCATAGCCGAATCCGGCG CAGCCGTCGCGCACTGCCCCACCTCCAACCTGTTCCTGGGCAGCGGCCTGTACAACTTCCACAAGAACGACGCACACCGC CTGGCACTCACGCTGGCGACCGACGTGGGCGGCGGCAGCTCGTTCTCGATGCTCCGCACGATGGGCACGGCGCATAAGGT CGCGCGCATGGGCGGTTATCACCTGACTGCGCTGCGGATGTTCTACCTGGCCACGCGCGGCGCCGCTGAGGCTCTGGGCT GGGAAGACCGCATCGGCAGCTTCGTGCCGGGCGCGGAAGCCGACTTCATCGTGCTGGACCCGGCAGCCACGCCGCTGCTG GCCCGCCGCAATGCGCGCTCGGAAACGCTGGAGGAACTGCTGTTCTCATTGGCGCTGCTGGGCGAGGATCGCGCCGTGGC TGCCACATACATCCAGGGCGAGCCCGCCAAATTCGCGGTTGGCGCCAACGCCTGA
Upstream 100 bases:
>100_bases AGCTTCGAGGCGTCATTCCTGCCCGAACAGGACAAAGCCCTGTGGCTCGCCAAGGTCGACGACCACTGGAAAGCCGCACA CTAAAAATCCACGAGACGAT
Downstream 100 bases:
>100_bases TCCATTTATAATCCTCGCTTCTATTGGGGAGTAGCCGCCTGGGGTCGATACCCCGGGGGCCACGTCAACAGACTTGACCG CCGTCGCAACGACAGGTGGT
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTTMPPTSNTVHAYRGRVLHFLHDPQYRERDAYEYWEDGLLVVLGGKVIKAGDYAALREDLPAGAQLHDYSGKLIVPGFI DTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESEQYAAGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFTQAQQR GMRMITGKVMMDRNCPEYLRDTAESGARDTADLISRWHGKDRLAYAITPRFAPTSSEAQLQACAELAKQYKDVFIQTHVA ENPDEVKWVADLFPDARSYLDVYDRYGLLRKGAFYGHAIWLDDGDRQRIAESGAAVAHCPTSNLFLGSGLYNFHKNDAHR LALTLATDVGGGSSFSMLRTMGTAHKVARMGGYHLTALRMFYLATRGAAEALGWEDRIGSFVPGAEADFIVLDPAATPLL ARRNARSETLEELLFSLALLGEDRAVAATYIQGEPAKFAVGANA
Sequences:
>Translated_444_residues MTTMPPTSNTVHAYRGRVLHFLHDPQYRERDAYEYWEDGLLVVLGGKVIKAGDYAALREDLPAGAQLHDYSGKLIVPGFI DTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESEQYAAGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFTQAQQR GMRMITGKVMMDRNCPEYLRDTAESGARDTADLISRWHGKDRLAYAITPRFAPTSSEAQLQACAELAKQYKDVFIQTHVA ENPDEVKWVADLFPDARSYLDVYDRYGLLRKGAFYGHAIWLDDGDRQRIAESGAAVAHCPTSNLFLGSGLYNFHKNDAHR LALTLATDVGGGSSFSMLRTMGTAHKVARMGGYHLTALRMFYLATRGAAEALGWEDRIGSFVPGAEADFIVLDPAATPLL ARRNARSETLEELLFSLALLGEDRAVAATYIQGEPAKFAVGANA >Mature_443_residues TTMPPTSNTVHAYRGRVLHFLHDPQYRERDAYEYWEDGLLVVLGGKVIKAGDYAALREDLPAGAQLHDYSGKLIVPGFID THIHFPQTDIIASPSPGLLHWLETYTFPEERRFESEQYAAGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFTQAQQRG MRMITGKVMMDRNCPEYLRDTAESGARDTADLISRWHGKDRLAYAITPRFAPTSSEAQLQACAELAKQYKDVFIQTHVAE NPDEVKWVADLFPDARSYLDVYDRYGLLRKGAFYGHAIWLDDGDRQRIAESGAAVAHCPTSNLFLGSGLYNFHKNDAHRL ALTLATDVGGGSSFSMLRTMGTAHKVARMGGYHLTALRMFYLATRGAAEALGWEDRIGSFVPGAEADFIVLDPAATPLLA RRNARSETLEELLFSLALLGEDRAVAATYIQGEPAKFAVGANA
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=376, Percent_Identity=35.1063829787234, Blast_Score=215, Evalue=7e-56, Organism=Escherichia coli, GI1789249, Length=402, Percent_Identity=47.7611940298507, Blast_Score=414, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6319963, Length=332, Percent_Identity=34.3373493975904, Blast_Score=188, Evalue=2e-48, Organism=Drosophila melanogaster, GI24643849, Length=450, Percent_Identity=33.5555555555556, Blast_Score=209, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 49205; Mature: 49074
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMPPTSNTVHAYRGRVLHFLHDPQYRERDAYEYWEDGLLVVLGGKVIKAGDYAALRED CCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCEEEEECCEEEECCCHHHHHHC LPAGAQLHDYSGKLIVPGFIDTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESEQYA CCCCCEEECCCCCEEECCEEECCEECCCCCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHH AGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFTQAQQRGMRMITGKVMMDRNCPEYLR HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEECEEEECCCCHHHHH DTAESGARDTADLISRWHGKDRLAYAITPRFAPTSSEAQLQACAELAKQYKDVFIQTHVA HHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECC ENPDEVKWVADLFPDARSYLDVYDRYGLLRKGAFYGHAIWLDDGDRQRIAESGAAVAHCP CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCEEEECC TSNLFLGSGLYNFHKNDAHRLALTLATDVGGGSSFSMLRTMGTAHKVARMGGYHLTALRM CCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH FYLATRGAAEALGWEDRIGSFVPGAEADFIVLDPAATPLLARRNARSETLEELLFSLALL HHHHHCCHHHHCCCHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHH GEDRAVAATYIQGEPAKFAVGANA CCCCEEEEEEECCCCCEEEECCCC >Mature Secondary Structure TTMPPTSNTVHAYRGRVLHFLHDPQYRERDAYEYWEDGLLVVLGGKVIKAGDYAALRED CCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCEEEEECCEEEECCCHHHHHHC LPAGAQLHDYSGKLIVPGFIDTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESEQYA CCCCCEEECCCCCEEECCEEECCEECCCCCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHH AGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFTQAQQRGMRMITGKVMMDRNCPEYLR HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEECEEEECCCCHHHHH DTAESGARDTADLISRWHGKDRLAYAITPRFAPTSSEAQLQACAELAKQYKDVFIQTHVA HHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECC ENPDEVKWVADLFPDARSYLDVYDRYGLLRKGAFYGHAIWLDDGDRQRIAESGAAVAHCP CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCEEEECC TSNLFLGSGLYNFHKNDAHRLALTLATDVGGGSSFSMLRTMGTAHKVARMGGYHLTALRM CCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH FYLATRGAAEALGWEDRIGSFVPGAEADFIVLDPAATPLLARRNARSETLEELLFSLALL HHHHHCCHHHHCCCHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHH GEDRAVAATYIQGEPAKFAVGANA CCCCEEEEEEECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]