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The map label for this gene is 187929195

Identifier: 187929195

GI number: 187929195

Start: 2232073

End: 2232729

Strand: Direct

Name: 187929195

Synonym: Rpic_2116

Alternate gene names: NA

Gene position: 2232073-2232729 (Clockwise)

Preceding gene: 187929188

Following gene: 187929196

Centisome position: 56.61

GC content: 66.82

Gene sequence:

>657_bases
ATGATTCACCCTCGTACTCTCAAGATTCTCGTGGTCGTGCTGTTGATGCACGCGGGCGTGCTGATGCTGATTCACCTTGG
CCTGATCGCACCGCGCCCGACTGTCGAAGAACCGCTGGAAATCCAGGCGCACATCATTCCGGCCGCGCCTCAGCCGATCA
GGCAGCCGGAGCCGCCCAAGCAGCAGCCGGTCAAGCAAGAGGCGCCCAAGCCTGTCAACATCGTCAGGCCGGTCGCGCAA
CCCAAGCCCACGCCGATGCCGACGCCCACGCTCCCGCCATCGGACAACGCCCCCGTGGTGCCCGCCGCACCGCCCGCGCC
GCCGGCACCGGCCCCTGAACAAGCGCCCGCGCCGGCCCCCGTTTCGTCCGGTCCGATCAGCGTCGGCATCAACGACATCC
AGTGCAGCGAGCCGCCGCTCGTCTATCCCAGCATGTCGCAGAAAATGGGCGAGGAAGGCCGCGCCATGGTCAAGATTTCC
ATCGGCACGGCCGGTGAGGTCACCAATGTTGCGGTCACGTCGTCGTCCGGCTCGCCTCGCCTGGACCGCGCCGCCACCGA
TGCCGCGCGTGCCATCAAGTGCAGCCCCTACAAGCAGAACGGCCGCGCCGTGCCCGTGGTGGCCAGCAAGCCGTTCGTCT
TCAAGCTCGATAACTAA

Upstream 100 bases:

>100_bases
CTGATCGTCTTCGGCAAGCGCTGACGCTGCGCCGCTTTCGTTGGTCATCCCACCACCATCGCATCGCATTCCTTTTTCTG
CTTTCGATTCCCGGTCGTTG

Downstream 100 bases:

>100_bases
TTCGATTCCGCCTCTCGCTTAGCCTCTCGCTCAATTCAGGACATTCATCATGCAGGAACTCGGCCTTTCCCACCTCTGGA
CCCAAGGCGATATCGTCACC

Product: TonB family protein

Products: NA

Alternate protein names: NB-Like Protein; NB-Like Protein Links Inner And Outer Membranes; NB Family Protein; Nb Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIHPRTLKILVVVLLMHAGVLMLIHLGLIAPRPTVEEPLEIQAHIIPAAPQPIRQPEPPKQQPVKQEAPKPVNIVRPVAQ
PKPTPMPTPTLPPSDNAPVVPAAPPAPPAPAPEQAPAPAPVSSGPISVGINDIQCSEPPLVYPSMSQKMGEEGRAMVKIS
IGTAGEVTNVAVTSSSGSPRLDRAATDAARAIKCSPYKQNGRAVPVVASKPFVFKLDN

Sequences:

>Translated_218_residues
MIHPRTLKILVVVLLMHAGVLMLIHLGLIAPRPTVEEPLEIQAHIIPAAPQPIRQPEPPKQQPVKQEAPKPVNIVRPVAQ
PKPTPMPTPTLPPSDNAPVVPAAPPAPPAPAPEQAPAPAPVSSGPISVGINDIQCSEPPLVYPSMSQKMGEEGRAMVKIS
IGTAGEVTNVAVTSSSGSPRLDRAATDAARAIKCSPYKQNGRAVPVVASKPFVFKLDN
>Mature_218_residues
MIHPRTLKILVVVLLMHAGVLMLIHLGLIAPRPTVEEPLEIQAHIIPAAPQPIRQPEPPKQQPVKQEAPKPVNIVRPVAQ
PKPTPMPTPTLPPSDNAPVVPAAPPAPPAPAPEQAPAPAPVSSGPISVGINDIQCSEPPLVYPSMSQKMGEEGRAMVKIS
IGTAGEVTNVAVTSSSGSPRLDRAATDAARAIKCSPYKQNGRAVPVVASKPFVFKLDN

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22870; Mature: 22870

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHPRTLKILVVVLLMHAGVLMLIHLGLIAPRPTVEEPLEIQAHIIPAAPQPIRQPEPPK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
QQPVKQEAPKPVNIVRPVAQPKPTPMPTPTLPPSDNAPVVPAAPPAPPAPAPEQAPAPAP
CCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VSSGPISVGINDIQCSEPPLVYPSMSQKMGEEGRAMVKISIGTAGEVTNVAVTSSSGSPR
CCCCCEEECCCCCCCCCCCEECCCHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCC
LDRAATDAARAIKCSPYKQNGRAVPVVASKPFVFKLDN
HHHHHHHHHHEEECCCCCCCCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MIHPRTLKILVVVLLMHAGVLMLIHLGLIAPRPTVEEPLEIQAHIIPAAPQPIRQPEPPK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
QQPVKQEAPKPVNIVRPVAQPKPTPMPTPTLPPSDNAPVVPAAPPAPPAPAPEQAPAPAP
CCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VSSGPISVGINDIQCSEPPLVYPSMSQKMGEEGRAMVKISIGTAGEVTNVAVTSSSGSPR
CCCCCEEECCCCCCCCCCCEECCCHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCC
LDRAATDAARAIKCSPYKQNGRAVPVVASKPFVFKLDN
HHHHHHHHHHEEECCCCCCCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA