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The map label for this gene is yqhA [C]

Identifier: 187929180

GI number: 187929180

Start: 2216177

End: 2216716

Strand: Direct

Name: yqhA [C]

Synonym: Rpic_2101

Alternate gene names: 187929180

Gene position: 2216177-2216716 (Clockwise)

Preceding gene: 187929179

Following gene: 187929181

Centisome position: 56.21

GC content: 60.74

Gene sequence:

>540_bases
ATGAAGTCGCCCATCGCCCCGCTGCGCCCGATTCCGCGCCTGATTTTCTTTTCCCGCTGGCTGCAACTGCCGCTTTACCT
GGGGCTGATCATCGCCCAGGCAGCGTATGTGTACCTCTTCGTCGTCGAGGTGTGGCACCTGGTTTCGCACCTGGGCGACC
TGGACGAAACCAAGATCATGCTGGCCGTGCTGGGCCTGATCGACGTGGTCATGATCTCCAACCTGCTGATCATGGTGATC
ATCGGGGGGTACGACATCTTCGTTTCCAAGCTCGGCATCGAGGGCCATGAAGACGAGCCCGAGTGGCTGGACCACGTCAA
CGCGGGGGTGCTGAAGGTGAAGCTGTCGATGGCGCTGATCAGCATCTCGTCGATCCACCTGCTCAAGACGTTCATCGACG
CTGCCCAGAAAGATACGCACACGATCCTGTGGCAGGTGGTGATCCACGTAGCGTTCCTGGTGTCTGCGCTGGTGATGGCC
TGGGTGGACCGCATCGTTTCGCACGCGCATCCGCACGGCGAGGCTGCCGACGCACATTGA

Upstream 100 bases:

>100_bases
ATCGGGAATGAAGCGCGTCACTCGCGTTTTCCAGTAAGCGATTCCGCAATCACGGACCGTTACAATCGCGCGGTTTTTCG
ACCACTCGCCCGTCCTACCC

Downstream 100 bases:

>100_bases
CGCTGTGCCCTTGTTGGCGCAGCGATTCCGACGAACGCGCTCGGACAATCCGCGCCCGACATTGGGTGTATGATCTTAGG
CTGTTTTGAGCCTGCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKSPIAPLRPIPRLIFFSRWLQLPLYLGLIIAQAAYVYLFVVEVWHLVSHLGDLDETKIMLAVLGLIDVVMISNLLIMVI
IGGYDIFVSKLGIEGHEDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFIDAAQKDTHTILWQVVIHVAFLVSALVMA
WVDRIVSHAHPHGEAADAH

Sequences:

>Translated_179_residues
MKSPIAPLRPIPRLIFFSRWLQLPLYLGLIIAQAAYVYLFVVEVWHLVSHLGDLDETKIMLAVLGLIDVVMISNLLIMVI
IGGYDIFVSKLGIEGHEDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFIDAAQKDTHTILWQVVIHVAFLVSALVMA
WVDRIVSHAHPHGEAADAH
>Mature_179_residues
MKSPIAPLRPIPRLIFFSRWLQLPLYLGLIIAQAAYVYLFVVEVWHLVSHLGDLDETKIMLAVLGLIDVVMISNLLIMVI
IGGYDIFVSKLGIEGHEDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFIDAAQKDTHTILWQVVIHVAFLVSALVMA
WVDRIVSHAHPHGEAADAH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=162, Percent_Identity=36.4197530864198, Blast_Score=120, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 19979; Mature: 19979

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPIAPLRPIPRLIFFSRWLQLPLYLGLIIAQAAYVYLFVVEVWHLVSHLGDLDETKIM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAVLGLIDVVMISNLLIMVIIGGYDIFVSKLGIEGHEDEPEWLDHVNAGVLKVKLSMALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
SISSIHLLKTFIDAAQKDTHTILWQVVIHVAFLVSALVMAWVDRIVSHAHPHGEAADAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKSPIAPLRPIPRLIFFSRWLQLPLYLGLIIAQAAYVYLFVVEVWHLVSHLGDLDETKIM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAVLGLIDVVMISNLLIMVIIGGYDIFVSKLGIEGHEDEPEWLDHVNAGVLKVKLSMALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
SISSIHLLKTFIDAAQKDTHTILWQVVIHVAFLVSALVMAWVDRIVSHAHPHGEAADAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]