| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yeaS [C]
Identifier: 187929114
GI number: 187929114
Start: 2143695
End: 2144369
Strand: Reverse
Name: yeaS [C]
Synonym: Rpic_2035
Alternate gene names: 187929114
Gene position: 2144369-2143695 (Counterclockwise)
Preceding gene: 187929115
Following gene: 187929113
Centisome position: 54.39
GC content: 63.56
Gene sequence:
>675_bases ATGAACGCCTTCATGCTCGCCCACTTCGGCATCACCGAGTTCTGGACCTTTCTGCTCGGCACGATTTTCATCGTGCTGCT GCCGGGGCCGAATTCGATGTACGTGCTGTCGGTGGCGGCCCGCCGCGGTGTGCGCGCGGGCTACCAGGGCGCGTGCGGCG TGTTTCTGGGTGATGCCATCCTGATGGTGTTGTCGGCAGCGGGCGTGGCTTCGCTGTTGAAGGCGAGTCCGGCGCTGTTC TACGTCGTGAAGTACATCGGCGCGGCGTATCTGGCGTGGATCGGCCTGCAGATGCTGCGTGGCGCGGTTCGCAACTGGCG TGTGCGCAAGGCCGGCGAGTCCGTCGCACAAGACGCGGCTCCGGCCGATGAATCGCACCCGTTCAAGAAGGCGCTGATCA TCAGTCTGCTGAACCCGAAGGCGATCCTGTTCTTCATCTCGTTCTTCATCCAGTTCGTCGATCCGCACTACGCGCTGCCG GCGGTGTCGTTCGTCGTGCTGGGGCTGGTCTGCCAGATCTGCAGCTTCCTGTACCTGACCACCATCATCTTCGTGGGCGC GCGGCTGGCCGCGGCGTTCCGCGCGCGACGACGTTTGTCTGCCGGTATGAGCAGCGGCGTCGGCGCCATGTTTATCGGCT TTTCCGCCAAGCTGGCGACGGCCACACTGAATTAA
Upstream 100 bases:
>100_bases GGAAGCGTCGCCCGGTCCGCATGACATCGCGTATCTGTTTGACCGCTTCACCGCGGCGATGGACGCAGCCAAACAGTAAA GCAACGAGAGCGCATCTGCC
Downstream 100 bases:
>100_bases TCGAATCGAGCGGGTTATGCCAAAACGTACAGATATCAAAACCATCCTGATCATCGGCGCGGGTCCGATCATCATCGGCC AGGCGTGTGAATTCGATTAC
Product: leucine export protein LeuE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNAFMLAHFGITEFWTFLLGTIFIVLLPGPNSMYVLSVAARRGVRAGYQGACGVFLGDAILMVLSAAGVASLLKASPALF YVVKYIGAAYLAWIGLQMLRGAVRNWRVRKAGESVAQDAAPADESHPFKKALIISLLNPKAILFFISFFIQFVDPHYALP AVSFVVLGLVCQICSFLYLTTIIFVGARLAAAFRARRRLSAGMSSGVGAMFIGFSAKLATATLN
Sequences:
>Translated_224_residues MNAFMLAHFGITEFWTFLLGTIFIVLLPGPNSMYVLSVAARRGVRAGYQGACGVFLGDAILMVLSAAGVASLLKASPALF YVVKYIGAAYLAWIGLQMLRGAVRNWRVRKAGESVAQDAAPADESHPFKKALIISLLNPKAILFFISFFIQFVDPHYALP AVSFVVLGLVCQICSFLYLTTIIFVGARLAAAFRARRRLSAGMSSGVGAMFIGFSAKLATATLN >Mature_224_residues MNAFMLAHFGITEFWTFLLGTIFIVLLPGPNSMYVLSVAARRGVRAGYQGACGVFLGDAILMVLSAAGVASLLKASPALF YVVKYIGAAYLAWIGLQMLRGAVRNWRVRKAGESVAQDAAPADESHPFKKALIISLLNPKAILFFISFFIQFVDPHYALP AVSFVVLGLVCQICSFLYLTTIIFVGARLAAAFRARRRLSAGMSSGVGAMFIGFSAKLATATLN
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=216, Percent_Identity=43.9814814814815, Blast_Score=188, Evalue=2e-49, Organism=Escherichia coli, GI48994979, Length=210, Percent_Identity=28.0952380952381, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI48994978, Length=191, Percent_Identity=26.7015706806283, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1786522, Length=122, Percent_Identity=33.6065573770492, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004778 - InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 24097; Mature: 24097
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAFMLAHFGITEFWTFLLGTIFIVLLPGPNSMYVLSVAARRGVRAGYQGACGVFLGDAI CCCEEEHHCCHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHH LMVLSAAGVASLLKASPALFYVVKYIGAAYLAWIGLQMLRGAVRNWRVRKAGESVAQDAA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC PADESHPFKKALIISLLNPKAILFFISFFIQFVDPHYALPAVSFVVLGLVCQICSFLYLT CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TIIFVGARLAAAFRARRRLSAGMSSGVGAMFIGFSAKLATATLN HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNAFMLAHFGITEFWTFLLGTIFIVLLPGPNSMYVLSVAARRGVRAGYQGACGVFLGDAI CCCEEEHHCCHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHH LMVLSAAGVASLLKASPALFYVVKYIGAAYLAWIGLQMLRGAVRNWRVRKAGESVAQDAA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC PADESHPFKKALIISLLNPKAILFFISFFIQFVDPHYALPAVSFVVLGLVCQICSFLYLT CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TIIFVGARLAAAFRARRRLSAGMSSGVGAMFIGFSAKLATATLN HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169201; 10984043 [H]