| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929094
Identifier: 187929094
GI number: 187929094
Start: 2119956
End: 2120777
Strand: Direct
Name: 187929094
Synonym: Rpic_2015
Alternate gene names: NA
Gene position: 2119956-2120777 (Clockwise)
Preceding gene: 187929093
Following gene: 187929095
Centisome position: 53.77
GC content: 68.0
Gene sequence:
>822_bases ATGTCGCCGATGGAAGCGGGTTGGATCATCAGTGCGGGGCTGGGCTCCGTGGTTGGCCTGATCCTGGCGCTGACGGGCGC AGGCGGCGCCATTGTCGCGGTGCCGCTGCTGATTTTTGGGTTGCATCTGTCGGTGCCGGAAGCTGCGCCCATTGCACTGC TGGCGGTGGGACTGTCCGCCGGGCTGGGTGCGACGCTCGGCTTGCGCGAACGCAAGGTCCGCTACAAAGCCGCTGGGCTG ATGGCGCTGTGCGGCGTGGTGATCTCGCCGTTCGGCATCTGGGTTGCGCACCGCGTGCCGAACACGCCGCTCACGCTGCT GTTTGCAGTGGTGCTCGCCTACGTGGCGGTACGCATGTTCCGGCAAGCGCGCGCAGCACCGTCCACCGAGCCGCGCCCGA GGCGGACAGCACCGCCCTGCCACCTTGACAGCACCACGGCCAAGCTCGTCTGGACGCTGCCGTGCGCGCGCGCATTGGCT GCGTCGGGCGTGGGCGCAGGCTTCCTGTCCGGGTTGCTGGGCGTGGGCGGCGGCTTTGTCATCGTGCCCGCATTGCGCCG CGCGACCGATCTGCCGATGCAAACCATCGTCGCCACCTCGTTGGCGGTGATTGCGCTGGTGTCCGGTGGCGGTGTGGTCG CCTCGGCCATCGGCGGGCATGTCGATTGGCATATTGCGCTGCCGTTTGCCGCCGGCGCCTTGACCGGCATGCTAGTGGGC AGACGCTTTGCGCGGCATCTTGCAGGGCCGGCGCTCCAGCAAGGATTTGCCGCGTTTGCGGGCGTCGTGGCGCTCGGGAT GATTGTCCGAACACTCATTTGA
Upstream 100 bases:
>100_bases TCTACTACCGGCTCGCCAGCTTCGAGGTCATCCAGATCATGCAGACGCTGTCCGAGCTTTACTGCGGCAAGGTCATGAAG AAGATGGCGGGACGCTGACC
Downstream 100 bases:
>100_bases CCAGCTTGTTGCGAAAGCGGTACAATCGCGGTCTTCGGGGCGTAGCGTAGTCTGGTAACGCGTCCGGTTTGGGACCGGAA GACCGCGGGTTCAAATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSPMEAGWIISAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVPEAAPIALLAVGLSAGLGATLGLRERKVRYKAAGL MALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYVAVRMFRQARAAPSTEPRPRRTAPPCHLDSTTAKLVWTLPCARALA ASGVGAGFLSGLLGVGGGFVIVPALRRATDLPMQTIVATSLAVIALVSGGGVVASAIGGHVDWHIALPFAAGALTGMLVG RRFARHLAGPALQQGFAAFAGVVALGMIVRTLI
Sequences:
>Translated_273_residues MSPMEAGWIISAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVPEAAPIALLAVGLSAGLGATLGLRERKVRYKAAGL MALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYVAVRMFRQARAAPSTEPRPRRTAPPCHLDSTTAKLVWTLPCARALA ASGVGAGFLSGLLGVGGGFVIVPALRRATDLPMQTIVATSLAVIALVSGGGVVASAIGGHVDWHIALPFAAGALTGMLVG RRFARHLAGPALQQGFAAFAGVVALGMIVRTLI >Mature_272_residues SPMEAGWIISAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVPEAAPIALLAVGLSAGLGATLGLRERKVRYKAAGLM ALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYVAVRMFRQARAAPSTEPRPRRTAPPCHLDSTTAKLVWTLPCARALAA SGVGAGFLSGLLGVGGGFVIVPALRRATDLPMQTIVATSLAVIALVSGGGVVASAIGGHVDWHIALPFAAGALTGMLVGR RFARHLAGPALQQGFAAFAGVVALGMIVRTLI
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27647; Mature: 27516
Theoretical pI: Translated: 12.02; Mature: 12.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPMEAGWIISAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVPEAAPIALLAVGLSA CCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC GLGATLGLRERKVRYKAAGLMALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYVAVRMF CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH RQARAAPSTEPRPRRTAPPCHLDSTTAKLVWTLPCARALAASGVGAGFLSGLLGVGGGFV HHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCE IVPALRRATDLPMQTIVATSLAVIALVSGGGVVASAIGGHVDWHIALPFAAGALTGMLVG EHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECHHHHHHHHHHHHH RRFARHLAGPALQQGFAAFAGVVALGMIVRTLI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SPMEAGWIISAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVPEAAPIALLAVGLSA CCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC GLGATLGLRERKVRYKAAGLMALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYVAVRMF CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH RQARAAPSTEPRPRRTAPPCHLDSTTAKLVWTLPCARALAASGVGAGFLSGLLGVGGGFV HHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCE IVPALRRATDLPMQTIVATSLAVIALVSGGGVVASAIGGHVDWHIALPFAAGALTGMLVG EHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECHHHHHHHHHHHHH RRFARHLAGPALQQGFAAFAGVVALGMIVRTLI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA