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The map label for this gene is acdS [H]

Identifier: 187929084

GI number: 187929084

Start: 2111888

End: 2112904

Strand: Direct

Name: acdS [H]

Synonym: Rpic_2004

Alternate gene names: 187929084

Gene position: 2111888-2112904 (Clockwise)

Preceding gene: 187929082

Following gene: 187929085

Centisome position: 53.57

GC content: 64.21

Gene sequence:

>1017_bases
ATGAACCTGCAGCGATTTCCCCGCTATCCCCTGACGTTCGGCCCGACGCCCATCCAGCCGCTGAAACGATTGAGCGCGCA
CCTGGGCGGCAAGGTGGAGTTGTTTGCCAAGCGCGAAGACTGCAACAGCGGCCTGGCCTTCGGCGGCAATAAAACGCGCA
AGCTGGAATACCTGATCCCGGAAGCGCTGGAAGGCGGGTACGACACGCTGGTGTCCATTGGCGGCATTCAGTCGAACCAG
ACGCGCCAGGTGGCCGCCGTGGCGGCGCACCTCGGTCTGAAGTGCGTGCTGGTGCAGGAAAACTGGGTGAACTACTCCGA
CGCCGTGTACGACCGCGTCGGCAATATCGAGATGTCGCGGATCATGGGCGCCGATGTGCGCCTCGATTCTGCGGGCTTCG
ACATCGGCATCCGGCCCAGTTGGGAGCAGGCCATGGACGACGTGCGCAAGCGCGGCGGCAAGCCGTTCCCGATTCCGGCC
GGCTGCTCCGAACACCCGCTTGGCGGACTGGGCTTTGTGGGCTTTGCTGAGGAAGTGCGCCAGCAGGAAGCGGAGCTGGG
CTTCAAGTTCGACTACATCGTGGTGTGCTCGGTCACGGGCAGCACGCAGGCCGGCATGGTCGTCGGCTTTGCGGCGGATG
GCCGGGCCGATAAGGTGATCGGCATCGATGCCTCGGCCAAGCCGGAACAGACGCGCGCGCAGATTCTCCGCATTGCGCAG
CACACCGCCGAGCTGGTCGACCTCGGCCGCAACATCACCGAAAGGGACGTGGTGCTCGACACGCGCTATGGCGGCCCGGA
ATACGGCCTGCCCAACGAAGGCACGCTTGAAGCGATTCGCCTGTGCGCGCGCCAGGAAGCCATGCTGACCGACCCGGTGT
ACGAGGGGAAATCCATGCACGGCATGATCGACATGGTGCGCAACGGTGAATTTCCTGCGGGCTCGCGCGTGCTCTACGCA
CATTTAGGCGGTGTGCCGGCACTCAACGCGTACAGCTTCATCTTCCGCAACGGTTGA

Upstream 100 bases:

>100_bases
GTTCTGGATAGTAGACGATCTTTGCAACCTTATTTCGTAGCGCTCTGCGTACCATTGGTTTCCGACATCCCGCCATTCGC
GGCACTGAAGGAGCCCCCTC

Downstream 100 bases:

>100_bases
TGCGGCGCATCCAGGCGTTGCGCGAGTTCTTCGAGGTGGAGCGCGCCTCCATCGTCATCGCCGCACTGAAGACGCTGGCC
GACGGCGGTGAACTGGAGTG

Product: 1-aminocyclopropane-1-carboxylate deaminase

Products: NA

Alternate protein names: ACC deaminase; ACCD [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNLQRFPRYPLTFGPTPIQPLKRLSAHLGGKVELFAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQ
TRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDSAGFDIGIRPSWEQAMDDVRKRGGKPFPIPA
GCSEHPLGGLGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRADKVIGIDASAKPEQTRAQILRIAQ
HTAELVDLGRNITERDVVLDTRYGGPEYGLPNEGTLEAIRLCARQEAMLTDPVYEGKSMHGMIDMVRNGEFPAGSRVLYA
HLGGVPALNAYSFIFRNG

Sequences:

>Translated_338_residues
MNLQRFPRYPLTFGPTPIQPLKRLSAHLGGKVELFAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQ
TRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDSAGFDIGIRPSWEQAMDDVRKRGGKPFPIPA
GCSEHPLGGLGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRADKVIGIDASAKPEQTRAQILRIAQ
HTAELVDLGRNITERDVVLDTRYGGPEYGLPNEGTLEAIRLCARQEAMLTDPVYEGKSMHGMIDMVRNGEFPAGSRVLYA
HLGGVPALNAYSFIFRNG
>Mature_338_residues
MNLQRFPRYPLTFGPTPIQPLKRLSAHLGGKVELFAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQ
TRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDSAGFDIGIRPSWEQAMDDVRKRGGKPFPIPA
GCSEHPLGGLGFVGFAEEVRQQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRADKVIGIDASAKPEQTRAQILRIAQ
HTAELVDLGRNITERDVVLDTRYGGPEYGLPNEGTLEAIRLCARQEAMLTDPVYEGKSMHGMIDMVRNGEFPAGSRVLYA
HLGGVPALNAYSFIFRNG

Specific function: Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=330, Percent_Identity=37.8787878787879, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005965
- InterPro:   IPR020601
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =3.5.99.7 [H]

Molecular weight: Translated: 36780; Mature: 36780

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQRFPRYPLTFGPTPIQPLKRLSAHLGGKVELFAKREDCNSGLAFGGNKTRKLEYLIP
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCEEEEEECH
EALEGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSR
HHHCCCHHHHEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCEEHHH
IMGADVRLDSAGFDIGIRPSWEQAMDDVRKRGGKPFPIPAGCSEHPLGGLGFVGFAEEVR
HCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRADKVIGIDASAKPEQTRAQILRIAQ
HHHHHCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHH
HTAELVDLGRNITERDVVLDTRYGGPEYGLPNEGTLEAIRLCARQEAMLTDPVYEGKSMH
HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
GMIDMVRNGEFPAGSRVLYAHLGGVPALNAYSFIFRNG
HHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNLQRFPRYPLTFGPTPIQPLKRLSAHLGGKVELFAKREDCNSGLAFGGNKTRKLEYLIP
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCCCEEEEEECH
EALEGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSR
HHHCCCHHHHEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCEEHHH
IMGADVRLDSAGFDIGIRPSWEQAMDDVRKRGGKPFPIPAGCSEHPLGGLGFVGFAEEVR
HCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRADKVIGIDASAKPEQTRAQILRIAQ
HHHHHCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHH
HTAELVDLGRNITERDVVLDTRYGGPEYGLPNEGTLEAIRLCARQEAMLTDPVYEGKSMH
HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
GMIDMVRNGEFPAGSRVLYAHLGGVPALNAYSFIFRNG
HHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA