| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187929072
Identifier: 187929072
GI number: 187929072
Start: 2102485
End: 2103309
Strand: Direct
Name: 187929072
Synonym: Rpic_1992
Alternate gene names: NA
Gene position: 2102485-2103309 (Clockwise)
Preceding gene: 187929071
Following gene: 187929073
Centisome position: 53.33
GC content: 66.55
Gene sequence:
>825_bases ATGGAATGGACCGTACAAAGCGAGCGCGCCTACGCCTACACCGGCGGCAAACCGTTCAACGCCGAACTGCCCTGCGTCGT CTTCGTGCATGGCGCGCAGAACGACCATTCGGTCTGGGGCCTGCAGACGCGATGGTTCGCGCATCACGGCTTCAGCGTGC TGGCGGTCGATCTGCCGGGCCACGGTCGCAGCGCCGGCGCCCCTCTGCAGACCGTGGAAGCCATGGCCGACTGGGTGATG GCGCTCGTGCACGCAGCCGGCGTCACCCAGCCAGTGGTTGTGGTCGGCCACAGCATGGGCTCGCTGATTGCGCTGGAGTG CGCGTCACGGTACGCCAGTCGCGTGCGCCGCATCGCGCTGGTAGCGACGGCCTGGCCGATGAAGGTGTCGGATGCGCTGC TTGACGCCGCGCTCAACAACACGCCGGCCGCCATTGATATGGTGAATACCTGGTCGCATTCCAGCCTGGCGAACAAGCCG TCAGCGCCGGGGCCGGGCTTCTGGATGCATGGCGGCAGCCAGCGGCTGATGGAACGGATAGCGCGCGGCACGGACGCGCC CGTCTTCCACACAGATTTTGCTGCCTGCAATGCCTATGCGCGCGGCGCCGAAGCCATGGCCGCCGCGAAGTGCCCGTCAC TCGTGATTGTGGGAGAAAAAGATCAGATGACGCCAGCAAAAGCCGGCCGTCAGGTTGCGGCAGGACTGGCCGGCAGCCGC GTTGTGGGGCTGCCTGGCGGGCACGCGATCATGGGAGAATGCCCCGACGGCACACTCGACGCGCTGATCGCCTTTGCACG CGAACGAGACACGGTCGCCGCATAA
Upstream 100 bases:
>100_bases ACGACCTGATCGACGATCTCAAGCGCGGCCTGAAAGCTGCCGAGCGCGCGATGTCGGCCGTGCCGGGCAAAGCCGCCGTC AAAGCAACGGGAGCCCGGTG
Downstream 100 bases:
>100_bases GTCGCCTCCTGGAGACGCATCATGGGCACCACCGACACCCGCAGCTTCGGCAGCTTCGCCGAGTTCTATCCGTACTACCT GAGTGAGCACCGGGATCGCA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Hydrolase; Carboxylesterase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold-Containing Protein; Hydrolase Protein; Hydolase; Alpha/Beta Fold Family Hydrolase; Glutamate Decarboxylase-Like PLP-Dependent Protein; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MEWTVQSERAYAYTGGKPFNAELPCVVFVHGAQNDHSVWGLQTRWFAHHGFSVLAVDLPGHGRSAGAPLQTVEAMADWVM ALVHAAGVTQPVVVVGHSMGSLIALECASRYASRVRRIALVATAWPMKVSDALLDAALNNTPAAIDMVNTWSHSSLANKP SAPGPGFWMHGGSQRLMERIARGTDAPVFHTDFAACNAYARGAEAMAAAKCPSLVIVGEKDQMTPAKAGRQVAAGLAGSR VVGLPGGHAIMGECPDGTLDALIAFARERDTVAA
Sequences:
>Translated_274_residues MEWTVQSERAYAYTGGKPFNAELPCVVFVHGAQNDHSVWGLQTRWFAHHGFSVLAVDLPGHGRSAGAPLQTVEAMADWVM ALVHAAGVTQPVVVVGHSMGSLIALECASRYASRVRRIALVATAWPMKVSDALLDAALNNTPAAIDMVNTWSHSSLANKP SAPGPGFWMHGGSQRLMERIARGTDAPVFHTDFAACNAYARGAEAMAAAKCPSLVIVGEKDQMTPAKAGRQVAAGLAGSR VVGLPGGHAIMGECPDGTLDALIAFARERDTVAA >Mature_274_residues MEWTVQSERAYAYTGGKPFNAELPCVVFVHGAQNDHSVWGLQTRWFAHHGFSVLAVDLPGHGRSAGAPLQTVEAMADWVM ALVHAAGVTQPVVVVGHSMGSLIALECASRYASRVRRIALVATAWPMKVSDALLDAALNNTPAAIDMVNTWSHSSLANKP SAPGPGFWMHGGSQRLMERIARGTDAPVFHTDFAACNAYARGAEAMAAAKCPSLVIVGEKDQMTPAKAGRQVAAGLAGSR VVGLPGGHAIMGECPDGTLDALIAFARERDTVAA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28806; Mature: 28806
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWTVQSERAYAYTGGKPFNAELPCVVFVHGAQNDHSVWGLQTRWFAHHGFSVLAVDLPG CCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEECCEEEEEECCCCEEEEEECCC HGRSAGAPLQTVEAMADWVMALVHAAGVTQPVVVVGHSMGSLIALECASRYASRVRRIAL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHE VATAWPMKVSDALLDAALNNTPAAIDMVNTWSHSSLANKPSAPGPGFWMHGGSQRLMERI EEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCHHHHHHHH ARGTDAPVFHTDFAACNAYARGAEAMAAAKCPSLVIVGEKDQMTPAKAGRQVAAGLAGSR HCCCCCCEEECHHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCE VVGLPGGHAIMGECPDGTLDALIAFARERDTVAA EEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEWTVQSERAYAYTGGKPFNAELPCVVFVHGAQNDHSVWGLQTRWFAHHGFSVLAVDLPG CCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEECCEEEEEECCCCEEEEEECCC HGRSAGAPLQTVEAMADWVMALVHAAGVTQPVVVVGHSMGSLIALECASRYASRVRRIAL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHE VATAWPMKVSDALLDAALNNTPAAIDMVNTWSHSSLANKPSAPGPGFWMHGGSQRLMERI EEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCHHHHHHHH ARGTDAPVFHTDFAACNAYARGAEAMAAAKCPSLVIVGEKDQMTPAKAGRQVAAGLAGSR HCCCCCCEEECHHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCE VVGLPGGHAIMGECPDGTLDALIAFARERDTVAA EEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA