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The map label for this gene is ydeD [C]

Identifier: 187929020

GI number: 187929020

Start: 2045981

End: 2046898

Strand: Reverse

Name: ydeD [C]

Synonym: Rpic_1940

Alternate gene names: 187929020

Gene position: 2046898-2045981 (Counterclockwise)

Preceding gene: 187929021

Following gene: 187929019

Centisome position: 51.92

GC content: 64.81

Gene sequence:

>918_bases
ATGACCCAAGCGTCTTCCGTCGCGCCAAACTTGGCGCGCGACTCCCTGTTTGTCGTCGCCATGCCGTGGCTGTTCGTGTT
GATCTGGAGCACGGGCTTTATCGTGGCCAAGTACGGGATGCCGTATGCGGAGCCGATGACCTTTCTGTTTTTCCGCTTTG
TGGGCGTGCTGGTATGCCTGCTACCGCTGGTGTGGATGGCGCGAGTGCCGCTGCCGCGCCGCTCCGGCACGGGCGAAACC
GACTGGGCGACAGTCGGCCACATCGCGGTGGCCGGTTTGCTGATGCAGTGGGGGTACCTTGCGGGCGTGTGGGCAGCGGT
TAAGCTGGGCATGCCGGCAGGGATGACTGCGCTGATCGTCGGCATGCAGCCGATTTTGACTGCGCTGTATGTCTCGATGC
GTGGGGAGCGTGTGTCGGGCCGCCAATGGTTGGGATTGCTATGCGGCATCGCGGGCGTGGGCCTGGTGGTGGCCAACAAG
TTGCATCTGGCGGGCGTGGGCGCGACGACGCTTGCGCTGTGCGTGAGCGCGCTGCTGTCGATCACCGTGGGTACGCTCTA
TCAAAAGCGCCATTGCCCGGTGTTCGACCTGCGGATGGGCGCGTGCATCCAGTTCGGGGCATCGGCGCTGCTGTGCCTGC
CGTTCATGTTTCTGTTTGAGACGCGCGAGGTGCATTGGACGCTGCCGATGATCGGCTCGCTGGTGTGGTCGGTGCTGGCG
CTGTCGATCGGCGCGATCTCGCTGCTCTTTGTGCTGATCCGCAGGGGCGCGGCCACCAAGGTGACGTCGCTCCTGTATCT
GACGCCGCCTACGACCGCCGTGATGGCGTGGGCGCTGTTCGGCGAACGTTTTCCGCCGCTTGCGGCGCTGGGCATGGTGA
TTGCCGCCTGCGGTGTGGCGCTCGTCATCCGCAAGTGA

Upstream 100 bases:

>100_bases
TGGCCGTCCACGCGCAGACCATCGCGCTGGCTGCGCGGCACGCACAGCGCTGGGCGGCCCGCGACGAGGCCGCCGCCTCG
CACTCTCTTCCGCTTTCCGC

Downstream 100 bases:

>100_bases
CCGCGTTTGAGTGCCTGGCGTATCCTGATCACTTTCCACTGCCACCGGCCAGCCGCCTATGAGCACGCCCCGTCAGACGC
GCGACGACTACCGCCACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTQASSVAPNLARDSLFVVAMPWLFVLIWSTGFIVAKYGMPYAEPMTFLFFRFVGVLVCLLPLVWMARVPLPRRSGTGET
DWATVGHIAVAGLLMQWGYLAGVWAAVKLGMPAGMTALIVGMQPILTALYVSMRGERVSGRQWLGLLCGIAGVGLVVANK
LHLAGVGATTLALCVSALLSITVGTLYQKRHCPVFDLRMGACIQFGASALLCLPFMFLFETREVHWTLPMIGSLVWSVLA
LSIGAISLLFVLIRRGAATKVTSLLYLTPPTTAVMAWALFGERFPPLAALGMVIAACGVALVIRK

Sequences:

>Translated_305_residues
MTQASSVAPNLARDSLFVVAMPWLFVLIWSTGFIVAKYGMPYAEPMTFLFFRFVGVLVCLLPLVWMARVPLPRRSGTGET
DWATVGHIAVAGLLMQWGYLAGVWAAVKLGMPAGMTALIVGMQPILTALYVSMRGERVSGRQWLGLLCGIAGVGLVVANK
LHLAGVGATTLALCVSALLSITVGTLYQKRHCPVFDLRMGACIQFGASALLCLPFMFLFETREVHWTLPMIGSLVWSVLA
LSIGAISLLFVLIRRGAATKVTSLLYLTPPTTAVMAWALFGERFPPLAALGMVIAACGVALVIRK
>Mature_304_residues
TQASSVAPNLARDSLFVVAMPWLFVLIWSTGFIVAKYGMPYAEPMTFLFFRFVGVLVCLLPLVWMARVPLPRRSGTGETD
WATVGHIAVAGLLMQWGYLAGVWAAVKLGMPAGMTALIVGMQPILTALYVSMRGERVSGRQWLGLLCGIAGVGLVVANKL
HLAGVGATTLALCVSALLSITVGTLYQKRHCPVFDLRMGACIQFGASALLCLPFMFLFETREVHWTLPMIGSLVWSVLAL
SIGAISLLFVLIRRGAATKVTSLLYLTPPTTAVMAWALFGERFPPLAALGMVIAACGVALVIRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32774; Mature: 32643

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQASSVAPNLARDSLFVVAMPWLFVLIWSTGFIVAKYGMPYAEPMTFLFFRFVGVLVCL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
LPLVWMARVPLPRRSGTGETDWATVGHIAVAGLLMQWGYLAGVWAAVKLGMPAGMTALIV
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GMQPILTALYVSMRGERVSGRQWLGLLCGIAGVGLVVANKLHLAGVGATTLALCVSALLS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ITVGTLYQKRHCPVFDLRMGACIQFGASALLCLPFMFLFETREVHWTLPMIGSLVWSVLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHH
LSIGAISLLFVLIRRGAATKVTSLLYLTPPTTAVMAWALFGERFPPLAALGMVIAACGVA
HHHHHHHHHHHHHHCCCHHHHHEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LVIRK
HHCCC
>Mature Secondary Structure 
TQASSVAPNLARDSLFVVAMPWLFVLIWSTGFIVAKYGMPYAEPMTFLFFRFVGVLVCL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
LPLVWMARVPLPRRSGTGETDWATVGHIAVAGLLMQWGYLAGVWAAVKLGMPAGMTALIV
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GMQPILTALYVSMRGERVSGRQWLGLLCGIAGVGLVVANKLHLAGVGATTLALCVSALLS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ITVGTLYQKRHCPVFDLRMGACIQFGASALLCLPFMFLFETREVHWTLPMIGSLVWSVLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHH
LSIGAISLLFVLIRRGAATKVTSLLYLTPPTTAVMAWALFGERFPPLAALGMVIAACGVA
HHHHHHHHHHHHHHCCCHHHHHEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LVIRK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA