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The map label for this gene is 187929019

Identifier: 187929019

GI number: 187929019

Start: 2045479

End: 2045922

Strand: Reverse

Name: 187929019

Synonym: Rpic_1939

Alternate gene names: NA

Gene position: 2045922-2045479 (Counterclockwise)

Preceding gene: 187929020

Following gene: 187929018

Centisome position: 51.89

GC content: 62.39

Gene sequence:

>444_bases
ATGAGCACGCCCCGTCAGACGCGCGACGACTACCGCCACTTCCACACCATCACCACGCGCTGGATGGACAACGACGTCTA
CGGTCACGTCAACAACGTCGTCTATTACAGCTACTTCGATACCGTGGTGAACGCGTATCTGATCGAGCAGGGCGTGCTGA
ACCCTGAACACAGCGACACCATCGGCCTCGTCATCGAGACACAATGCAACTACTTCGCGCCGCTGTCGTTTCCCGATCCC
GTGGTGGCAGGGCTGCGCGTTGCACGCCTTGGCAACACGAGCGTGCGCTATGAGGTGGGTCTGTTCCGCTGCGACGCCCA
GGAGGCCGCCGCTCAGGGCCATTTCGTGCACGTCTACGTCGACCGCGAAACACGTCGCCCGGTGCCACTGCCCGATGCGC
TGCGTGCTGTGCTCGAACCGCTCGCGTCCAATATCACCGCCTGA

Upstream 100 bases:

>100_bases
GTGATTGCCGCCTGCGGTGTGGCGCTCGTCATCCGCAAGTGACCGCGTTTGAGTGCCTGGCGTATCCTGATCACTTTCCA
CTGCCACCGGCCAGCCGCCT

Downstream 100 bases:

>100_bases
ATTTTGCGCATCGCCATGACCGACCGACGCCCCACCTCCACAGAAGTCGAACGCGTCGATCAGGCAATCACTTCGCGCCG
CTCCGTTCGCGCATTCTTGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase; Thioesterase/Thiol Ester Dehydrase-Isomerase; GCN5-Related N-Acetyltransferase; Thioesterase Protein; Acyl-CoA Thioesterase; Acyl-CoA Hydrolase/Thioesterase; Acyl-CoA Hydrolase

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSTPRQTRDDYRHFHTITTRWMDNDVYGHVNNVVYYSYFDTVVNAYLIEQGVLNPEHSDTIGLVIETQCNYFAPLSFPDP
VVAGLRVARLGNTSVRYEVGLFRCDAQEAAAQGHFVHVYVDRETRRPVPLPDALRAVLEPLASNITA

Sequences:

>Translated_147_residues
MSTPRQTRDDYRHFHTITTRWMDNDVYGHVNNVVYYSYFDTVVNAYLIEQGVLNPEHSDTIGLVIETQCNYFAPLSFPDP
VVAGLRVARLGNTSVRYEVGLFRCDAQEAAAQGHFVHVYVDRETRRPVPLPDALRAVLEPLASNITA
>Mature_146_residues
STPRQTRDDYRHFHTITTRWMDNDVYGHVNNVVYYSYFDTVVNAYLIEQGVLNPEHSDTIGLVIETQCNYFAPLSFPDPV
VAGLRVARLGNTSVRYEVGLFRCDAQEAAAQGHFVHVYVDRETRRPVPLPDALRAVLEPLASNITA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16686; Mature: 16555

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPRQTRDDYRHFHTITTRWMDNDVYGHVNNVVYYSYFDTVVNAYLIEQGVLNPEHSDT
CCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCE
IGLVIETQCNYFAPLSFPDPVVAGLRVARLGNTSVRYEVGLFRCDAQEAAAQGHFVHVYV
EEEEEECCCCEEECCCCCCHHHHHEEHEECCCCCEEEEEEEEEECHHHHHCCCCEEEEEE
DRETRRPVPLPDALRAVLEPLASNITA
ECCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STPRQTRDDYRHFHTITTRWMDNDVYGHVNNVVYYSYFDTVVNAYLIEQGVLNPEHSDT
CCCCCCHHHHHHHHHHHHEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCE
IGLVIETQCNYFAPLSFPDPVVAGLRVARLGNTSVRYEVGLFRCDAQEAAAQGHFVHVYV
EEEEEECCCCEEECCCCCCHHHHHEEHEECCCCCEEEEEEEEEECHHHHHCCCCEEEEEE
DRETRRPVPLPDALRAVLEPLASNITA
ECCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA