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The map label for this gene is tex [H]

Identifier: 187929004

GI number: 187929004

Start: 2029668

End: 2032001

Strand: Direct

Name: tex [H]

Synonym: Rpic_1924

Alternate gene names: 187929004

Gene position: 2029668-2032001 (Clockwise)

Preceding gene: 187929000

Following gene: 187929005

Centisome position: 51.48

GC content: 65.17

Gene sequence:

>2334_bases
ATGACTGATTCCGTGTTGCAGAAGATCGTCTCCCGCATCGCCATTGAACTGGCGGTCCGGCCCCAGCAGGTTGCCGCCGC
CGTGCAACTGCTGGACGAAGGCGCCACAGTGCCCTTCATCGCACGTTACCGCAAGGAAGTGACGGACAACCTGGACGACA
CGCAACTGCGCAACCTGGAAGAGCGCCTGCTGTACCTGCGCGAACTGGAAGACCGCCGCGCGGCCATCCTGGCTTCCATT
GAAGAGCAAGGCAAGCTGACCGATGCCCTGCGCACCGCCATCGAGGCGGCCGAGACCAAGCAGGTGCTGGAAGATCTCTA
CCTGCCCTACAAGCCCAAGCGCCGCACACGCGCTCAGATCGCCCGCGAATGCGGCCTGGAGCCGCTGGCCCAGGCGCTGC
TGGCCGACCCCACGCTCGATCCTCAAACCGAAGCCGCCAAGTTCGTCAACGGCAATCCGACCGCCGATGGTGGCGTGCCG
GACGTGAAGGCCGCACTGGACGGCGCACGCGACATCCTCTCCGAGCAATTTGGCGAGACAGCCGAGCTGCTTGGCAAGGT
GCGCGACCATCTTTGGAATCAAGGCCAGGTTTCGTCGACCGTGGTGGAAGGCAAGGAAACCGCCGAAGAAGAAAAATTCC
GCGATTACTACGCGTATAGCGAGCCGATCCGCAACGTGCCGTCGCACCGCGCGCTGGCCCTGTTCCGCGGCCGCAATGCA
GGCGTGCTGTTCGTCAAACTCGGACTCGGCGAAGAACAGGACGCGCTGAACCCGCACCCGTGCGAAATCATGATCGCGCG
CCATGTCGGCATCGAAAACAGGGGCCGCGCAGCTGACAAGTGGCTGTCGGACGTGTGCCGCTGGTGCTGGCGCGTGAAGG
TTCAGCCGCATATCGAAACCGAACTGCTCACGCAACTCCGGGAATCGGCCGAAGCCGAGGCCATCAAGATCTTCGGCCGC
AATCTGCACGATCTGCTGCTGGCCGCGCCGGCCGGCCCGAAAGCGGTGATGGGCGTCGACCCGGGCATCCGCACGGGCTG
CAAGATCGCGGTGGTTGACCACACTGGCAAGCTGCTCGAAACCGCTACGATCTATCCGCACGAGCCGCGCCGCGACTGGA
ACGGTTCGCTCGCGACGATGGCCCGCCTGGCCAAGCAGCACGGCGTGGCCCTGGTTTCCATCGGCAACGGCACAGCAAGC
CGCGAGACCGACAAGTTGGTGCAGGACCTGATGCGTAACGCACCGGAGCTGAAGCTGACCAAGATCGTGGTGAGCGAGGC
CGGCGCGTCTGTGTATTCGGCGTCGGAGCTGGCGGCCAAGGAGTTCCCCGAACTGGACGTGTCGCTACGTGGCGCGGTGT
CGATCGCGCGCCGCCTGCAAGACCCGCTGGCCGAACTCGTGAAGATCGACCCGAAGTCGATCGGCGTCGGCCAGTATCAG
CACGACGTGAACCAGCGCGAGCTGGCACGCGCGCTGGACGCCATCGTCGAGGATTGCGTGAACGCGGTCGGCGTGGATGT
GAACACAGCCTCTGCCCCGCTGCTGGCGCGTGTATCGGGCCTGAACTCCATCCTCGCCAAGAACATCGTCGAGTATCGCG
ATGCCAACGGCGCGTTCGCCAACCGCGACGCGCTCAAGAAAGTCCCGCGCCTGGGCGACAAGACGTTCGAGCAGGCCGCA
GGCTTCCTGCGCATCAACGACGGCGACAATCCGCTGGATCGTTCCTCGGTGCACCCGGAAGCGTATCCGGTGGTCAAGCG
CATCCTCGACAGCATCAAGAAGGGCATCGGCGACGTGCTCGGCAACCGCGAGGCACTGCGTGGCCTGACCGCCCGTGACT
TCACCGACGAGAAATTCGGCCTGCCGACCGTGGTCGACATCCTGTCTGAACTGGAAAAACCCGGCCGCGACCCGCGCCCC
GAGTTCAAGACGGCGACGTTCCAGGACGGCGTGGAAGACATCAAGGACCTGCAGCCCGGCATGGTGCTCGAAGGCGTGGT
GACGAACGTGGCGGCGTTTGGCGCCTTCATCGACATCGGCGTGCATCAGGACGGCCTGGTACACGTGTCGGCGCTGTCGA
CCAAGTTCGTGCGCGACCCGCACGAGGTGGTCAAGCCTGGCCAGATCGTCAAGGTCAAGGTGATGGAGGTGGACGTGAAG
CGCAACCGCATCGGCCTGACGATGCGCCTCTCGGATGAGCCCGGTCAGACGGCCGCGCGCACGGGCGGCAGCGATCGCCC
GAGCAGCGGCGGCGGTCGCCACGGCGGTCAGCAACGTCGTGCGCCGGAACCGTCCGGCGCCATGGCAGAAGCGTTCGCCA
AGCTCAAGCGCTAA

Upstream 100 bases:

>100_bases
CGCCTGTGCGGCAAACGCCGCGCGGCCACGGATTTCAGCTCAGGAACAGGGTTCGCGTTGTGGCAAAATGCGCGGCTTTC
CATCGCACTCTCTGGAAGCA

Downstream 100 bases:

>100_bases
CGCGCATTCTATTGAGCGGAACCCGCCCGGTTTTCGGACTCGGCGGGTTTTTTCATGGCCGCGTGCGGGCCGTTACAAGT
CCTTACGCGCATGGATCTTT

Product: RNA binding S1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 777; Mature: 776

Protein sequence:

>777_residues
MTDSVLQKIVSRIAIELAVRPQQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLEERLLYLRELEDRRAAILASI
EEQGKLTDALRTAIEAAETKQVLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTLDPQTEAAKFVNGNPTADGGVP
DVKAALDGARDILSEQFGETAELLGKVRDHLWNQGQVSSTVVEGKETAEEEKFRDYYAYSEPIRNVPSHRALALFRGRNA
GVLFVKLGLGEEQDALNPHPCEIMIARHVGIENRGRAADKWLSDVCRWCWRVKVQPHIETELLTQLRESAEAEAIKIFGR
NLHDLLLAAPAGPKAVMGVDPGIRTGCKIAVVDHTGKLLETATIYPHEPRRDWNGSLATMARLAKQHGVALVSIGNGTAS
RETDKLVQDLMRNAPELKLTKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQ
HDVNQRELARALDAIVEDCVNAVGVDVNTASAPLLARVSGLNSILAKNIVEYRDANGAFANRDALKKVPRLGDKTFEQAA
GFLRINDGDNPLDRSSVHPEAYPVVKRILDSIKKGIGDVLGNREALRGLTARDFTDEKFGLPTVVDILSELEKPGRDPRP
EFKTATFQDGVEDIKDLQPGMVLEGVVTNVAAFGAFIDIGVHQDGLVHVSALSTKFVRDPHEVVKPGQIVKVKVMEVDVK
RNRIGLTMRLSDEPGQTAARTGGSDRPSSGGGRHGGQQRRAPEPSGAMAEAFAKLKR

Sequences:

>Translated_777_residues
MTDSVLQKIVSRIAIELAVRPQQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLEERLLYLRELEDRRAAILASI
EEQGKLTDALRTAIEAAETKQVLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTLDPQTEAAKFVNGNPTADGGVP
DVKAALDGARDILSEQFGETAELLGKVRDHLWNQGQVSSTVVEGKETAEEEKFRDYYAYSEPIRNVPSHRALALFRGRNA
GVLFVKLGLGEEQDALNPHPCEIMIARHVGIENRGRAADKWLSDVCRWCWRVKVQPHIETELLTQLRESAEAEAIKIFGR
NLHDLLLAAPAGPKAVMGVDPGIRTGCKIAVVDHTGKLLETATIYPHEPRRDWNGSLATMARLAKQHGVALVSIGNGTAS
RETDKLVQDLMRNAPELKLTKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQ
HDVNQRELARALDAIVEDCVNAVGVDVNTASAPLLARVSGLNSILAKNIVEYRDANGAFANRDALKKVPRLGDKTFEQAA
GFLRINDGDNPLDRSSVHPEAYPVVKRILDSIKKGIGDVLGNREALRGLTARDFTDEKFGLPTVVDILSELEKPGRDPRP
EFKTATFQDGVEDIKDLQPGMVLEGVVTNVAAFGAFIDIGVHQDGLVHVSALSTKFVRDPHEVVKPGQIVKVKVMEVDVK
RNRIGLTMRLSDEPGQTAARTGGSDRPSSGGGRHGGQQRRAPEPSGAMAEAFAKLKR
>Mature_776_residues
TDSVLQKIVSRIAIELAVRPQQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLEERLLYLRELEDRRAAILASIE
EQGKLTDALRTAIEAAETKQVLEDLYLPYKPKRRTRAQIARECGLEPLAQALLADPTLDPQTEAAKFVNGNPTADGGVPD
VKAALDGARDILSEQFGETAELLGKVRDHLWNQGQVSSTVVEGKETAEEEKFRDYYAYSEPIRNVPSHRALALFRGRNAG
VLFVKLGLGEEQDALNPHPCEIMIARHVGIENRGRAADKWLSDVCRWCWRVKVQPHIETELLTQLRESAEAEAIKIFGRN
LHDLLLAAPAGPKAVMGVDPGIRTGCKIAVVDHTGKLLETATIYPHEPRRDWNGSLATMARLAKQHGVALVSIGNGTASR
ETDKLVQDLMRNAPELKLTKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH
DVNQRELARALDAIVEDCVNAVGVDVNTASAPLLARVSGLNSILAKNIVEYRDANGAFANRDALKKVPRLGDKTFEQAAG
FLRINDGDNPLDRSSVHPEAYPVVKRILDSIKKGIGDVLGNREALRGLTARDFTDEKFGLPTVVDILSELEKPGRDPRPE
FKTATFQDGVEDIKDLQPGMVLEGVVTNVAAFGAFIDIGVHQDGLVHVSALSTKFVRDPHEVVKPGQIVKVKVMEVDVKR
NRIGLTMRLSDEPGQTAARTGGSDRPSSGGGRHGGQQRRAPEPSGAMAEAFAKLKR

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=809, Percent_Identity=33.9925834363412, Blast_Score=400, Evalue=1e-111,
Organism=Homo sapiens, GI27597090, Length=726, Percent_Identity=22.3140495867769, Blast_Score=92, Evalue=2e-18,
Organism=Escherichia coli, GI87082262, Length=757, Percent_Identity=64.2007926023778, Blast_Score=944, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=88, Percent_Identity=36.3636363636364, Blast_Score=66, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=715, Percent_Identity=28.951048951049, Blast_Score=250, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17552892, Length=573, Percent_Identity=21.6404886561955, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI62484314, Length=759, Percent_Identity=29.9077733860343, Blast_Score=340, Evalue=3e-93,
Organism=Drosophila melanogaster, GI24640080, Length=598, Percent_Identity=20.9030100334448, Blast_Score=77, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 84891; Mature: 84759

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSVLQKIVSRIAIELAVRPQQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLE
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
ERLLYLRELEDRRAAILASIEEQGKLTDALRTAIEAAETKQVLEDLYLPYKPKRRTRAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARECGLEPLAQALLADPTLDPQTEAAKFVNGNPTADGGVPDVKAALDGARDILSEQFGET
HHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHH
AELLGKVRDHLWNQGQVSSTVVEGKETAEEEKFRDYYAYSEPIRNVPSHRALALFRGRNA
HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCC
GVLFVKLGLGEEQDALNPHPCEIMIARHVGIENRGRAADKWLSDVCRWCWRVKVQPHIET
CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
ELLTQLRESAEAEAIKIFGRNLHDLLLAAPAGPKAVMGVDPGIRTGCKIAVVDHTGKLLE
HHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCEEEECCCCCCCCCEEEEEECCCCHHH
TATIYPHEPRRDWNGSLATMARLAKQHGVALVSIGNGTASRETDKLVQDLMRNAPELKLT
HEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHH
KIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQ
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
HDVNQRELARALDAIVEDCVNAVGVDVNTASAPLLARVSGLNSILAKNIVEYRDANGAFA
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NRDALKKVPRLGDKTFEQAAGFLRINDGDNPLDRSSVHPEAYPVVKRILDSIKKGIGDVL
CHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GNREALRGLTARDFTDEKFGLPTVVDILSELEKPGRDPRPEFKTATFQDGVEDIKDLQPG
CCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
MVLEGVVTNVAAFGAFIDIGVHQDGLVHVSALSTKFVRDPHEVVKPGQIVKVKVMEVDVK
HHHHHHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCHHHCCCCCEEEEEEEEEEEC
RNRIGLTMRLSDEPGQTAARTGGSDRPSSGGGRHGGQQRRAPEPSGAMAEAFAKLKR
CCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TDSVLQKIVSRIAIELAVRPQQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLE
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
ERLLYLRELEDRRAAILASIEEQGKLTDALRTAIEAAETKQVLEDLYLPYKPKRRTRAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARECGLEPLAQALLADPTLDPQTEAAKFVNGNPTADGGVPDVKAALDGARDILSEQFGET
HHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHH
AELLGKVRDHLWNQGQVSSTVVEGKETAEEEKFRDYYAYSEPIRNVPSHRALALFRGRNA
HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCC
GVLFVKLGLGEEQDALNPHPCEIMIARHVGIENRGRAADKWLSDVCRWCWRVKVQPHIET
CEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
ELLTQLRESAEAEAIKIFGRNLHDLLLAAPAGPKAVMGVDPGIRTGCKIAVVDHTGKLLE
HHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCEEEECCCCCCCCCEEEEEECCCCHHH
TATIYPHEPRRDWNGSLATMARLAKQHGVALVSIGNGTASRETDKLVQDLMRNAPELKLT
HEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHH
KIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQ
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
HDVNQRELARALDAIVEDCVNAVGVDVNTASAPLLARVSGLNSILAKNIVEYRDANGAFA
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NRDALKKVPRLGDKTFEQAAGFLRINDGDNPLDRSSVHPEAYPVVKRILDSIKKGIGDVL
CHHHHHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GNREALRGLTARDFTDEKFGLPTVVDILSELEKPGRDPRPEFKTATFQDGVEDIKDLQPG
CCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
MVLEGVVTNVAAFGAFIDIGVHQDGLVHVSALSTKFVRDPHEVVKPGQIVKVKVMEVDVK
HHHHHHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCHHHCCCCCEEEEEEEEEEEC
RNRIGLTMRLSDEPGQTAARTGGSDRPSSGGGRHGGQQRRAPEPSGAMAEAFAKLKR
CCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]