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The map label for this gene is yfiH [C]

Identifier: 187928998

GI number: 187928998

Start: 2023484

End: 2024293

Strand: Reverse

Name: yfiH [C]

Synonym: Rpic_1918

Alternate gene names: 187928998

Gene position: 2024293-2023484 (Counterclockwise)

Preceding gene: 187928999

Following gene: 187928996

Centisome position: 51.34

GC content: 66.3

Gene sequence:

>810_bases
ATGCCGATGTCAACTGACTGGATCGTCCCCGACTGGCCTGCGCATCCTCGCGTCAAGGCGCTGGCCACGACGCGCCTGGG
TGGCGTCAGTACAGGACCTTACGGTTTGGCCGGCGGTTTGCCGGGTGGCCTGAACCTCGGCCAGCACGTCGGTGACGCGC
CCGAAGCCGTTGATCAGAATCGCCGCATCTTGCGTGCAGCGCTACCCGCCGATCCAACATGGATGGAACAGGTGCACGGC
ACCGATGTGGCTGATCTTGATCAACTCGTTGGTACGTCAGCGCCTGTGGTCGCCGATGCGGCGGTGGCGTCCTGGCGGGA
TCGCGTCTGCGTAGTCATGACGGCCGATTGCCTGCCTGTCTTGCTGAGCGACGCCCGCGGCGTCACTGTGGGCGCCGCGC
ATGCGGGCTGGCGTGGTCTCTGTGGCGGCGTGATCGAGCGCACGCTCGACGCCATGATGCAGCGGCTGCGTGCCAGCGGG
CAGGAGGCCGATCCCACGTGGCTGGCATGGCTGGGGCCCGCCATCGGACCATCATGCTTTGAAGTGGGTGAGGAAGTGCG
TCAAGCCTTTATCGACGCCGTCAGGCCCGGCGAACTGCCTGCCACGGAAGCGGCGTTCCGGGAGGGCGTATCGGCTGGCA
AGGTCTTTGCCGACCTGTATGCGCTGGCCCGGCTGCGGCTGGCGCGGGTTGGTTGTACCGACGTGTACGGCGGCGGCCTG
TGCACGATGATGGACGTCGAGCGCTTCTATTCATACCGACGGGAGCGCATCACAGGCCGTATGGCCACGCTGATCTGGCG
CGCCGAGTAA

Upstream 100 bases:

>100_bases
CTGGGGCTCGTGCACCCAGCATCGGGCAAATCGGTGCACTGGGAAGCCGGCGTGCCCGACGATTTTGCCGATCTGCTGGA
AGCTCTCGACCTGGACCCCG

Downstream 100 bases:

>100_bases
GCGTTCAGGCGGCGCCGTCGCCTGTGTCGCTGCTCAATGTGGCGGTGGTGTCCGCCTCGTCCTGCGCAGCTTCCTGGGCT
TTCCGGCGCCGCCTGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MPMSTDWIVPDWPAHPRVKALATTRLGGVSTGPYGLAGGLPGGLNLGQHVGDAPEAVDQNRRILRAALPADPTWMEQVHG
TDVADLDQLVGTSAPVVADAAVASWRDRVCVVMTADCLPVLLSDARGVTVGAAHAGWRGLCGGVIERTLDAMMQRLRASG
QEADPTWLAWLGPAIGPSCFEVGEEVRQAFIDAVRPGELPATEAAFREGVSAGKVFADLYALARLRLARVGCTDVYGGGL
CTMMDVERFYSYRRERITGRMATLIWRAE

Sequences:

>Translated_269_residues
MPMSTDWIVPDWPAHPRVKALATTRLGGVSTGPYGLAGGLPGGLNLGQHVGDAPEAVDQNRRILRAALPADPTWMEQVHG
TDVADLDQLVGTSAPVVADAAVASWRDRVCVVMTADCLPVLLSDARGVTVGAAHAGWRGLCGGVIERTLDAMMQRLRASG
QEADPTWLAWLGPAIGPSCFEVGEEVRQAFIDAVRPGELPATEAAFREGVSAGKVFADLYALARLRLARVGCTDVYGGGL
CTMMDVERFYSYRRERITGRMATLIWRAE
>Mature_268_residues
PMSTDWIVPDWPAHPRVKALATTRLGGVSTGPYGLAGGLPGGLNLGQHVGDAPEAVDQNRRILRAALPADPTWMEQVHGT
DVADLDQLVGTSAPVVADAAVASWRDRVCVVMTADCLPVLLSDARGVTVGAAHAGWRGLCGGVIERTLDAMMQRLRASGQ
EADPTWLAWLGPAIGPSCFEVGEEVRQAFIDAVRPGELPATEAAFREGVSAGKVFADLYALARLRLARVGCTDVYGGGLC
TMMDVERFYSYRRERITGRMATLIWRAE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=264, Percent_Identity=47.3484848484849, Blast_Score=216, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28783; Mature: 28652

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSTDWIVPDWPAHPRVKALATTRLGGVSTGPYGLAGGLPGGLNLGQHVGDAPEAVDQN
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHH
RRILRAALPADPTWMEQVHGTDVADLDQLVGTSAPVVADAAVASWRDRVCVVMTADCLPV
HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEHHHHHH
LLSDARGVTVGAAHAGWRGLCGGVIERTLDAMMQRLRASGQEADPTWLAWLGPAIGPSCF
HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHH
EVGEEVRQAFIDAVRPGELPATEAAFREGVSAGKVFADLYALARLRLARVGCTDVYGGGL
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
CTMMDVERFYSYRRERITGRMATLIWRAE
HHHHHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure 
PMSTDWIVPDWPAHPRVKALATTRLGGVSTGPYGLAGGLPGGLNLGQHVGDAPEAVDQN
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHH
RRILRAALPADPTWMEQVHGTDVADLDQLVGTSAPVVADAAVASWRDRVCVVMTADCLPV
HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEHHHHHH
LLSDARGVTVGAAHAGWRGLCGGVIERTLDAMMQRLRASGQEADPTWLAWLGPAIGPSCF
HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHH
EVGEEVRQAFIDAVRPGELPATEAAFREGVSAGKVFADLYALARLRLARVGCTDVYGGGL
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
CTMMDVERFYSYRRERITGRMATLIWRAE
HHHHHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 8097014 [H]