| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is cusB [H]
Identifier: 187928890
GI number: 187928890
Start: 1898783
End: 1900315
Strand: Direct
Name: cusB [H]
Synonym: Rpic_1808
Alternate gene names: 187928890
Gene position: 1898783-1900315 (Clockwise)
Preceding gene: 187928889
Following gene: 187928891
Centisome position: 48.16
GC content: 65.95
Gene sequence:
>1533_bases ATGAAAAAACAGATTATCGCCACGGCGGCCGGCCTCGCCATTCTCGGCGCCGCGATGTATGGCGCTTACCACTTCGGCGT CACGCAGGGAGCACGGTCGGCACAATCGTCGGCGCCGGCCAGCGCGGCATCCGGTCTCAAGGCCGGCGACGTCGATCCCA AGACCGGCAAAAAGGTACTGTACTGGCACGACCCCATGGTGCCCGGACAGCGTTTCGACAAGCCGGGCAAATCCCCCTTC ATGGACATGCAGTTGGTGCCGGTCTATGCGGACGGGGATAGCGGTGCCAGCGGCATCACGGTCGATAGCCGTGTCGCGCA AAACCTCGGCATCCGCACGGCCGAAGTCAAAGCCGGCCGGTTGAGCACGGTACTGGAGGCGCCCGGCAACATCGTCATCG ACGAGCGCAGCGTGCAAGTAATCCAGGCGCGCACGAACGCCTTCGTCCAGCACGTCGCGGTCAGGGCGACGCTTGACCCA GTTCGGCGTGGGCAGGCACTGGTGACTCTGTATTCGCCGGACTGGGTGGCGGCCCAGGAAGAGTATCTGGCCGTGTTGCG CCAGTCGGCACACGGTCAGGCCGATCTCGCCAGTGCGGCCAAGGCGCGCATGCTGCAGACCGGCATGACGCCCGGGCAGG TCAGCGCCGTCGAGGCATCCGGACGGCTGCAGCCCAGCGTGGGCATCGCGAGCCCCATCGATGGCATCGTGACCGAGGTC GCGGTGCGAGACGGGATGACAGTCTCGCCCGGCATGACTCTGTTCCGTCTGGCCGACTTAAGCCAGGTCTGGGTGGTTGC CGAGGTGCCGGAAGGCCAGGCCCGCACCATTGCGCCCGGCCTGGCGGTCAAGGTGACACCGACCGGGGCGGCCGAGCCGC TGGTCGGCAAGGTCGACACCGTGTTGCCCGACGTCAACCCGGCGACGCGGACCATCAAGGTGCGCATCGTCCTGCCCAAC AAGGGCCGGCACCTGTTGCCGGGCATGTTTGCCACGGTTCGCTTCGACAGCGGCGAGCAGCAGGACGTACTGACCATCCC GTTGGAAGCCGTCATCCGTACCGGTCAGCGCAGCATTGTCATGGTCGATGGAGGCCAGGCCGGCTTTGTGGCCACCGAGA TCAAGACCGGGCGCGAGGCCGGTGGAATGGTCGAGGTCCTGACTGGTCTCAAGGCTGGCCAGAAGGTCGTTACGTCCGGC CAGTTCCTGATCGATTCGGAAGCCAGCCTGCGTGGAACCACCGAGCGTATGGCGGTACCGGCCGCGGCATCTGCGCCGGC AGCGGCCAACGCCGAACACGAAGGCGTCGGTCGCATCGAGACCGTCACGGGTGAAGGCCTGACGATCTCGCATGGTCCGA TTCCCTCGATCCAGTGGGGGGCCATGACAATGGAGTTTGCGGCACCTCCCACAGGGTTGCCCAAGGGTTTTAAGCCCGGC GATCGCGTCCGCTTCCGCTTCCATCTGAACGCCGAGGGCATGGCGATTCTGTCTTCGGTCGAGCCCGCCGCTGGCACGGG GAGCAAACCATGA
Upstream 100 bases:
>100_bases GACTCGCGCTGGAGGCCAAGACGGCCAAGCTGTGGGCGGACCTGACCTTCCTGGTCCCGCTGCCCACCGCGCAGACCGAG TCCGCCATCAAGGAACCCAA
Downstream 100 bases:
>100_bases TCGCCCGGCTGATTCTCGCGTCCATCCGCAACCGCTTCCTGATCCTGCTGGCGACGCTGATGTTGACCGCGTGGGGATTG TGGGCCGTCCGCAGCACCCC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MKKQIIATAAGLAILGAAMYGAYHFGVTQGARSAQSSAPASAASGLKAGDVDPKTGKKVLYWHDPMVPGQRFDKPGKSPF MDMQLVPVYADGDSGASGITVDSRVAQNLGIRTAEVKAGRLSTVLEAPGNIVIDERSVQVIQARTNAFVQHVAVRATLDP VRRGQALVTLYSPDWVAAQEEYLAVLRQSAHGQADLASAAKARMLQTGMTPGQVSAVEASGRLQPSVGIASPIDGIVTEV AVRDGMTVSPGMTLFRLADLSQVWVVAEVPEGQARTIAPGLAVKVTPTGAAEPLVGKVDTVLPDVNPATRTIKVRIVLPN KGRHLLPGMFATVRFDSGEQQDVLTIPLEAVIRTGQRSIVMVDGGQAGFVATEIKTGREAGGMVEVLTGLKAGQKVVTSG QFLIDSEASLRGTTERMAVPAAASAPAAANAEHEGVGRIETVTGEGLTISHGPIPSIQWGAMTMEFAAPPTGLPKGFKPG DRVRFRFHLNAEGMAILSSVEPAAGTGSKP
Sequences:
>Translated_510_residues MKKQIIATAAGLAILGAAMYGAYHFGVTQGARSAQSSAPASAASGLKAGDVDPKTGKKVLYWHDPMVPGQRFDKPGKSPF MDMQLVPVYADGDSGASGITVDSRVAQNLGIRTAEVKAGRLSTVLEAPGNIVIDERSVQVIQARTNAFVQHVAVRATLDP VRRGQALVTLYSPDWVAAQEEYLAVLRQSAHGQADLASAAKARMLQTGMTPGQVSAVEASGRLQPSVGIASPIDGIVTEV AVRDGMTVSPGMTLFRLADLSQVWVVAEVPEGQARTIAPGLAVKVTPTGAAEPLVGKVDTVLPDVNPATRTIKVRIVLPN KGRHLLPGMFATVRFDSGEQQDVLTIPLEAVIRTGQRSIVMVDGGQAGFVATEIKTGREAGGMVEVLTGLKAGQKVVTSG QFLIDSEASLRGTTERMAVPAAASAPAAANAEHEGVGRIETVTGEGLTISHGPIPSIQWGAMTMEFAAPPTGLPKGFKPG DRVRFRFHLNAEGMAILSSVEPAAGTGSKP >Mature_510_residues MKKQIIATAAGLAILGAAMYGAYHFGVTQGARSAQSSAPASAASGLKAGDVDPKTGKKVLYWHDPMVPGQRFDKPGKSPF MDMQLVPVYADGDSGASGITVDSRVAQNLGIRTAEVKAGRLSTVLEAPGNIVIDERSVQVIQARTNAFVQHVAVRATLDP VRRGQALVTLYSPDWVAAQEEYLAVLRQSAHGQADLASAAKARMLQTGMTPGQVSAVEASGRLQPSVGIASPIDGIVTEV AVRDGMTVSPGMTLFRLADLSQVWVVAEVPEGQARTIAPGLAVKVTPTGAAEPLVGKVDTVLPDVNPATRTIKVRIVLPN KGRHLLPGMFATVRFDSGEQQDVLTIPLEAVIRTGQRSIVMVDGGQAGFVATEIKTGREAGGMVEVLTGLKAGQKVVTSG QFLIDSEASLRGTTERMAVPAAASAPAAANAEHEGVGRIETVTGEGLTISHGPIPSIQWGAMTMEFAAPPTGLPKGFKPG DRVRFRFHLNAEGMAILSSVEPAAGTGSKP
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=370, Percent_Identity=36.7567567567568, Blast_Score=238, Evalue=7e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53093; Mature: 53093
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQIIATAAGLAILGAAMYGAYHFGVTQGARSAQSSAPASAASGLKAGDVDPKTGKKVL CCCEEEHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCEEE YWHDPMVPGQRFDKPGKSPFMDMQLVPVYADGDSGASGITVDSRVAQNLGIRTAEVKAGR EEECCCCCCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEHHHHHHHCCCEEEEECCCC LSTVLEAPGNIVIDERSVQVIQARTNAFVQHVAVRATLDPVRRGQALVTLYSPDWVAAQE HHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH EYLAVLRQSAHGQADLASAAKARMLQTGMTPGQVSAVEASGRLQPSVGIASPIDGIVTEV HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH AVRDGMTVSPGMTLFRLADLSQVWVVAEVPEGQARTIAPGLAVKVTPTGAAEPLVGKVDT HHHCCCEECCCCCEEEECCCCEEEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCHHH VLPDVNPATRTIKVRIVLPNKGRHLLPGMFATVRFDSGEQQDVLTIPLEAVIRTGQRSIV HCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHCCCCEEE MVDGGQAGFVATEIKTGREAGGMVEVLTGLKAGQKVVTSGQFLIDSEASLRGTTERMAVP EEECCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHHHEECC AAASAPAAANAEHEGVGRIETVTGEGLTISHGPIPSIQWGAMTMEFAAPPTGLPKGFKPG CCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCC DRVRFRFHLNAEGMAILSSVEPAAGTGSKP CEEEEEEEECCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MKKQIIATAAGLAILGAAMYGAYHFGVTQGARSAQSSAPASAASGLKAGDVDPKTGKKVL CCCEEEHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCEEE YWHDPMVPGQRFDKPGKSPFMDMQLVPVYADGDSGASGITVDSRVAQNLGIRTAEVKAGR EEECCCCCCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEHHHHHHHCCCEEEEECCCC LSTVLEAPGNIVIDERSVQVIQARTNAFVQHVAVRATLDPVRRGQALVTLYSPDWVAAQE HHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH EYLAVLRQSAHGQADLASAAKARMLQTGMTPGQVSAVEASGRLQPSVGIASPIDGIVTEV HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH AVRDGMTVSPGMTLFRLADLSQVWVVAEVPEGQARTIAPGLAVKVTPTGAAEPLVGKVDT HHHCCCEECCCCCEEEECCCCEEEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCHHH VLPDVNPATRTIKVRIVLPNKGRHLLPGMFATVRFDSGEQQDVLTIPLEAVIRTGQRSIV HCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEECHHHHHHCCCCEEE MVDGGQAGFVATEIKTGREAGGMVEVLTGLKAGQKVVTSGQFLIDSEASLRGTTERMAVP EEECCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHHHEECC AAASAPAAANAEHEGVGRIETVTGEGLTISHGPIPSIQWGAMTMEFAAPPTGLPKGFKPG CCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCC DRVRFRFHLNAEGMAILSSVEPAAGTGSKP CEEEEEEEECCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]