| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is ygcG [H]
Identifier: 187928779
GI number: 187928779
Start: 1789129
End: 1789989
Strand: Direct
Name: ygcG [H]
Synonym: Rpic_1696
Alternate gene names: 187928779
Gene position: 1789129-1789989 (Clockwise)
Preceding gene: 187928778
Following gene: 187928780
Centisome position: 45.38
GC content: 61.09
Gene sequence:
>861_bases GTGAACCTCCTCAAAATCGCGCGTGGCTTGCTTGTGGCAGCGGCTGCGCTCGTCTCTTTTGGGGCGGTTGCCGAAGTTGC CGTGCCACCCTTGACGGCGCGGGTGACTGACCAGACCGGCACACTCACGCCTGGGCAACTAGCAGAGCTAGAACAGACGC TGCAAGCCTTCGAAAACAAAAAGGGCGTGCAGATCGCTGTACTGATCGTGCCCAGCACACTGCCCGAAGCCATCGAACAG TATTCGCTGCGCGTGGTCGAGCAATGGAAGTTGGGGCGAAAGCGCGTCGACGACGGCGCACTGCTGATCATCGCTAAAGA CGACCGCACACTTCGCATTGAAGTCGGGTACGGGTTGGAAGGTGTCCTAACCGATGCGACAAGCAAGCGCATCATTAGCG AAGTCATCTCGCCGCGGTTCAAGACTGGCGATTTTTATGGCGGCGTGAAAGACGGTGTTCAGAGTATGCAAGCCGTGATT GAGGGTGAAGCACTGCCGCCCCCCTCACGGTCGACGCGCGACGGAGGCGTATCCGTTCGGTCCTATATGCCTGTCATTCT GGTGTTGACGTTGGTGTTTGGCGGCGCGCTGCGAGACTTCCTTGGCCGTTTTCCGGGGGCGGTTGCAGCGGGCGGCGCCG TCGCCCTAGTCGCTTGGTTGCTTTCGGGCGCCATTTTTGTCGCGTTTACGGCGGGAGTGATCGCGCTCATCTATACGCTA TTGGGTCCGGGCATGGTTGGGCACGGAGGCTCTTGGTCTACAGGCTCACGCTCGGGCCGCGGCGGTTTCGGCGGTGGCAG CGGCGGTTTCGGTGGAGGCGGCGGTGGTTTCGGTGGTGGTGGTGCCTCGGGAAAATGGTGA
Upstream 100 bases:
>100_bases AGGAGAAGCCCAATTTCACCGTTGCCAACGAGACGGCCATTGCCAAGCCGCCCCAGGTGGAATTCGGTTCGCCGTCCGCC AGTGCGCCGGGGAGCTCCAA
Downstream 100 bases:
>100_bases TGGAAAACATCAAGCGAATTCTTTCCCATCTACTGACGACGCACTGGCGCGTCAGGCGAGCGTTCCCGCGCAAGGCGATG CGGGCCATCGGGCAAGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNLLKIARGLLVAAAALVSFGAVAEVAVPPLTARVTDQTGTLTPGQLAELEQTLQAFENKKGVQIAVLIVPSTLPEAIEQ YSLRVVEQWKLGRKRVDDGALLIIAKDDRTLRIEVGYGLEGVLTDATSKRIISEVISPRFKTGDFYGGVKDGVQSMQAVI EGEALPPPSRSTRDGGVSVRSYMPVILVLTLVFGGALRDFLGRFPGAVAAGGAVALVAWLLSGAIFVAFTAGVIALIYTL LGPGMVGHGGSWSTGSRSGRGGFGGGSGGFGGGGGGFGGGGASGKW
Sequences:
>Translated_286_residues MNLLKIARGLLVAAAALVSFGAVAEVAVPPLTARVTDQTGTLTPGQLAELEQTLQAFENKKGVQIAVLIVPSTLPEAIEQ YSLRVVEQWKLGRKRVDDGALLIIAKDDRTLRIEVGYGLEGVLTDATSKRIISEVISPRFKTGDFYGGVKDGVQSMQAVI EGEALPPPSRSTRDGGVSVRSYMPVILVLTLVFGGALRDFLGRFPGAVAAGGAVALVAWLLSGAIFVAFTAGVIALIYTL LGPGMVGHGGSWSTGSRSGRGGFGGGSGGFGGGGGGFGGGGASGKW >Mature_286_residues MNLLKIARGLLVAAAALVSFGAVAEVAVPPLTARVTDQTGTLTPGQLAELEQTLQAFENKKGVQIAVLIVPSTLPEAIEQ YSLRVVEQWKLGRKRVDDGALLIIAKDDRTLRIEVGYGLEGVLTDATSKRIISEVISPRFKTGDFYGGVKDGVQSMQAVI EGEALPPPSRSTRDGGVSVRSYMPVILVLTLVFGGALRDFLGRFPGAVAAGGAVALVAWLLSGAIFVAFTAGVIALIYTL LGPGMVGHGGSWSTGSRSGRGGFGGGSGGFGGGGGGFGGGGASGKW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=162, Percent_Identity=37.6543209876543, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 29285; Mature: 29285
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKIARGLLVAAAALVSFGAVAEVAVPPLTARVTDQTGTLTPGQLAELEQTLQAFENK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC KGVQIAVLIVPSTLPEAIEQYSLRVVEQWKLGRKRVDDGALLIIAKDDRTLRIEVGYGLE CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCC GVLTDATSKRIISEVISPRFKTGDFYGGVKDGVQSMQAVIEGEALPPPSRSTRDGGVSVR HHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH SYMPVILVLTLVFGGALRDFLGRFPGAVAAGGAVALVAWLLSGAIFVAFTAGVIALIYTL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGPGMVGHGGSWSTGSRSGRGGFGGGSGGFGGGGGGFGGGGASGKW HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLLKIARGLLVAAAALVSFGAVAEVAVPPLTARVTDQTGTLTPGQLAELEQTLQAFENK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC KGVQIAVLIVPSTLPEAIEQYSLRVVEQWKLGRKRVDDGALLIIAKDDRTLRIEVGYGLE CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCC GVLTDATSKRIISEVISPRFKTGDFYGGVKDGVQSMQAVIEGEALPPPSRSTRDGGVSVR HHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH SYMPVILVLTLVFGGALRDFLGRFPGAVAAGGAVALVAWLLSGAIFVAFTAGVIALIYTL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGPGMVGHGGSWSTGSRSGRGGFGGGSGGFGGGGGGFGGGGASGKW HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]