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The map label for this gene is lemA [H]

Identifier: 187928778

GI number: 187928778

Start: 1788509

End: 1789132

Strand: Direct

Name: lemA [H]

Synonym: Rpic_1695

Alternate gene names: 187928778

Gene position: 1788509-1789132 (Clockwise)

Preceding gene: 187928776

Following gene: 187928779

Centisome position: 45.36

GC content: 58.81

Gene sequence:

>624_bases
ATGCGAGCAGCATGGTCAGTCGTTGTTGCGGTAATTTTGGCAATCAGCCTCTCGGGGTGCGGCTATAACACCATTCAAGC
GCAGGATGAACAGGTCAAGGCAGGCTGGTCTGAAGTCGTGAACCAATACCAGCGGCGCGCCGACCTGGTACCGAACCTGG
TCAACACGGTCAAGGGTTACGCAAGTCATGAGAAAGAGGTGTTGACGGAGGTGACTGAGGCTCGCGCGCGTGTCGGCGCC
ATCCAAGCCTCGCCTGCGTTGCTCAATGATCCGCAGGCGTTTGCCCGATTCCAGTCGGCGCAGCAGCAGTTGACCGGATC
GCTGTCCCGACTCCTTGCCGTGTCGGAGAACTACCCGCAGTTGAAGGCAGATGCTGGGTTTCGCGATCTGCAAGCACAGC
TTGAGGGGACCGAGAACCGGATCACCATTGCACGAAATCGGTACATCCAATCGGTACAGAGCTACAACGTGACCGTGCGC
TCATTTCCATCGAATCTGACCGCGAAGGCCTTCGGCTATCAGGAGAAGCCCAATTTCACCGTTGCCAACGAGACGGCCAT
TGCCAAGCCGCCCCAGGTGGAATTCGGTTCGCCGTCCGCCAGTGCGCCGGGGAGCTCCAAGTGA

Upstream 100 bases:

>100_bases
GGAGCGGCATGGGCTCTTGTGTGGCAGGAACGGCATGGTTGGCCCATGCGCGGTGTTCCCATGCCTCCGGGGCTAAGAAT
CTCGAAAATGGAGGTGTCTG

Downstream 100 bases:

>100_bases
ACCTCCTCAAAATCGCGCGTGGCTTGCTTGTGGCAGCGGCTGCGCTCGTCTCTTTTGGGGCGGTTGCCGAAGTTGCCGTG
CCACCCTTGACGGCGCGGGT

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRAAWSVVVAVILAISLSGCGYNTIQAQDEQVKAGWSEVVNQYQRRADLVPNLVNTVKGYASHEKEVLTEVTEARARVGA
IQASPALLNDPQAFARFQSAQQQLTGSLSRLLAVSENYPQLKADAGFRDLQAQLEGTENRITIARNRYIQSVQSYNVTVR
SFPSNLTAKAFGYQEKPNFTVANETAIAKPPQVEFGSPSASAPGSSK

Sequences:

>Translated_207_residues
MRAAWSVVVAVILAISLSGCGYNTIQAQDEQVKAGWSEVVNQYQRRADLVPNLVNTVKGYASHEKEVLTEVTEARARVGA
IQASPALLNDPQAFARFQSAQQQLTGSLSRLLAVSENYPQLKADAGFRDLQAQLEGTENRITIARNRYIQSVQSYNVTVR
SFPSNLTAKAFGYQEKPNFTVANETAIAKPPQVEFGSPSASAPGSSK
>Mature_207_residues
MRAAWSVVVAVILAISLSGCGYNTIQAQDEQVKAGWSEVVNQYQRRADLVPNLVNTVKGYASHEKEVLTEVTEARARVGA
IQASPALLNDPQAFARFQSAQQQLTGSLSRLLAVSENYPQLKADAGFRDLQAQLEGTENRITIARNRYIQSVQSYNVTVR
SFPSNLTAKAFGYQEKPNFTVANETAIAKPPQVEFGSPSASAPGSSK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22476; Mature: 22476

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAAWSVVVAVILAISLSGCGYNTIQAQDEQVKAGWSEVVNQYQRRADLVPNLVNTVKGY
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASHEKEVLTEVTEARARVGAIQASPALLNDPQAFARFQSAQQQLTGSLSRLLAVSENYPQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LKADAGFRDLQAQLEGTENRITIARNRYIQSVQSYNVTVRSFPSNLTAKAFGYQEKPNFT
CCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCEE
VANETAIAKPPQVEFGSPSASAPGSSK
ECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAAWSVVVAVILAISLSGCGYNTIQAQDEQVKAGWSEVVNQYQRRADLVPNLVNTVKGY
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASHEKEVLTEVTEARARVGAIQASPALLNDPQAFARFQSAQQQLTGSLSRLLAVSENYPQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LKADAGFRDLQAQLEGTENRITIARNRYIQSVQSYNVTVRSFPSNLTAKAFGYQEKPNFT
CCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCEE
VANETAIAKPPQVEFGSPSASAPGSSK
ECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]