Click here to switch to the map view.

The map label for this gene is yeaB [H]

Identifier: 187928758

GI number: 187928758

Start: 1763769

End: 1764692

Strand: Reverse

Name: yeaB [H]

Synonym: Rpic_1675

Alternate gene names: 187928758

Gene position: 1764692-1763769 (Counterclockwise)

Preceding gene: 187928759

Following gene: 187928756

Centisome position: 44.76

GC content: 57.47

Gene sequence:

>924_bases
ATGCAACAGCCAACCGAGATCGATTTCGACAGCGAGACACCGGCCATCAAGCGCGCGGCGAAACGCAGCACTCTCGTGAG
CGTGGGTGTCAATTTGGCCCTAACGGCCGCGCAACTGGTTGCTGGCGTTCTTGCCCATTCACAAGCGTTGATAGCCGACG
CAATTCACTCGCTTTCCGACCTGGTTTCGGATTTCGTCGTCCTCTTTGCCGGACACCATAGCCAGAAGGAACCGGACGCA
GAACATCACTATGGTCACCTTCGGTTCGAGACAGCGGCATCCCTGGTTTTGGGCTTGCTGCTACTTGGCGTAGGCATCGG
GATGCTTTGGAGTGCGGTGACAAAGCTGGAGCATCCGGAATCAATTTCACATGTGAAGTTGATTGGCTTGTGGGTCGCAC
TTGGCGCACTGGTGAGCAAAGAGCTGTTGTTCCGGTACATGCTGGCCGTCGCCGAGCGCGTGCGCTCCAGCATGCTGATA
GCGAACGCCTGGCATGCTCGCTCCGACGCAGCCTCCTCGTTGGTGGTCGCACTCGGCATCATCGGCAATTTGCTTGGATT
TCACCTGCTCGACCCGGTAGCCGCACTCATTGTGGGGCTGATGGTATCCAGAATGGGGTGGCAGTTTGGCTCGAATGCTC
TGCACGATCTCATGGACAGAGCCGTCGATGAAGAGACAGCGACCGAAATTCGGCAAGTAATGCTCGGCACGCCAGGCGTG
CTTGGCGTTCATGACGTTCGGACACGCAAGATGGGCGACATGATCCTGGTGGACGCGCACTTGGAGATCGAAAGCACCGC
AACCGTGAAGGTCGGTCACGACATCGCGCTGGAAGCAAGGCGACGCGTCATGGAAAGACATGATGTTCTCAATGTCATGA
CCCACGTCGATCCCGTAGACAGGCTCACAGCCGGTACAAGCTAG

Upstream 100 bases:

>100_bases
GGTTATTCCCCAAACGGTCAATTCTCAACCTATGATCGCGGACAAATCCAGGCGCTCGCCCTCAAGGTGACCGGTCCTCG
ACCATCAGACAAACCAGACC

Downstream 100 bases:

>100_bases
CCGTTCAGTCGCGGTAAGAACACGTTGAATCTTGAGCCTTTGCCTTCTTCGCTGGTCACAGTGATCGTTCCTCGGTGCAG
TTCCACGACCAGCTTCACCA

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MQQPTEIDFDSETPAIKRAAKRSTLVSVGVNLALTAAQLVAGVLAHSQALIADAIHSLSDLVSDFVVLFAGHHSQKEPDA
EHHYGHLRFETAASLVLGLLLLGVGIGMLWSAVTKLEHPESISHVKLIGLWVALGALVSKELLFRYMLAVAERVRSSMLI
ANAWHARSDAASSLVVALGIIGNLLGFHLLDPVAALIVGLMVSRMGWQFGSNALHDLMDRAVDEETATEIRQVMLGTPGV
LGVHDVRTRKMGDMILVDAHLEIESTATVKVGHDIALEARRRVMERHDVLNVMTHVDPVDRLTAGTS

Sequences:

>Translated_307_residues
MQQPTEIDFDSETPAIKRAAKRSTLVSVGVNLALTAAQLVAGVLAHSQALIADAIHSLSDLVSDFVVLFAGHHSQKEPDA
EHHYGHLRFETAASLVLGLLLLGVGIGMLWSAVTKLEHPESISHVKLIGLWVALGALVSKELLFRYMLAVAERVRSSMLI
ANAWHARSDAASSLVVALGIIGNLLGFHLLDPVAALIVGLMVSRMGWQFGSNALHDLMDRAVDEETATEIRQVMLGTPGV
LGVHDVRTRKMGDMILVDAHLEIESTATVKVGHDIALEARRRVMERHDVLNVMTHVDPVDRLTAGTS
>Mature_307_residues
MQQPTEIDFDSETPAIKRAAKRSTLVSVGVNLALTAAQLVAGVLAHSQALIADAIHSLSDLVSDFVVLFAGHHSQKEPDA
EHHYGHLRFETAASLVLGLLLLGVGIGMLWSAVTKLEHPESISHVKLIGLWVALGALVSKELLFRYMLAVAERVRSSMLI
ANAWHARSDAASSLVVALGIIGNLLGFHLLDPVAALIVGLMVSRMGWQFGSNALHDLMDRAVDEETATEIRQVMLGTPGV
LGVHDVRTRKMGDMILVDAHLEIESTATVKVGHDIALEARRRVMERHDVLNVMTHVDPVDRLTAGTS

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=255, Percent_Identity=26.6666666666667, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1786966, Length=244, Percent_Identity=25.8196721311475, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115534117, Length=264, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6325032, Length=230, Percent_Identity=30.8695652173913, Blast_Score=123, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6323831, Length=234, Percent_Identity=32.0512820512821, Blast_Score=109, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 33171; Mature: 33171

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCC
>Mature Secondary Structure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HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377; 8951816 [H]